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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000003.1:1663330..1665093- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_32390-T1 ID=CAN33_32390-T1|Name=CAN33_32390-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1764bp|location=Sequence derived from alignment at NKJJ01000003.1:1663330..1665093- (Aspergillus niger FDAARGOS_311) ATGTCTCTGGGCAACTTCTTGGCCGATGAGAGTGAGTCCCTGTGCACCCA
CATCGTCGCGGGGATGAACGGTGGCTAATAGGAACAGACTTCGGCTCTTG
GGCTGATGAGATGGAGGACATGCCTTTGCCTGGTAAGTGACTGATTCCTT
GCCTTCGGTCTATCGCTGTCTGCTAATATTGATGCCTCTCTAGCCGGTAT
GTTGCACATGATGCTTCTTCCTTCGACCCGAACGATGCTAAACATATATC
AGCTCCCGCCCCGTCCAGCTTCGGCCGCTCTGCTGCGCCTTCTTCTGGTT
TCGGAAGCAGCTTTGGTGGTGGTACGATAATCTTCCCTGTGTTATTGCTG
CAATTTTGCTTCGATATATGTGTTTGATACTGATGCGAATATAAGAGCGT
GAGCGTGGTGGCTACGCCGTGAGAGAGCCCCTTCCTCTTCCCACCCAGCC
CCCTACACTGCCCATGTTGGAAACCTGTCCTTTGATGCGACTGCCGCCGA
TATCTCCGACCTCTTTGCCGACTGTGGTGTCACCAACGTCCGTATCGTGG
AGGACAAGTTGACCAAGGCCCCCAAGGGCTTCGGATATGTCGAATTTGAG
ACTGTTGATGGTCTGAAGAAGGCTCTTGATCTTTCCGGCGCTACCCTCCA
GGGACGTGCCATCCGCACCAGCATTGCCGAACCTCGTAGGTGTCCTTGCT
CCGGTATGATGATCTGCGCCAGCTGACGGTACCTATAGCCAAGGAACGTG
ATGTCAAGGAGTTTGACTGGACCCGCAGAGGTCCTCTGCCCGATATTCCC
CAGCGCCGTGTGCCCGATCGTTCCTCTTTCGGACGCAACCTCGACAACGT
GTCTGATGCCGGCAGCGAACGGGGTAGTGGCCGCCGCAACTTTGAGAGTG
ATGGAAAGTTCCGTGATTTCAGCAACTGGGAACGCAAGGGCCCTCTCTCT
CCCCCGCCTGCACCTGTCCGGGAAGGTGGCCGTTCCCGCAACGACGAAGG
TCCTGGTTTCAGAAGAAGCTCCCCCGCCTGGGGTGAGGGACGCTCCCAGG
ATGGCTCCCGCCCCCGAGACGCGAATTCCAAGAACGCACCCCCACCGCGG
CTGAACTCGATAACGCATGGAGATCCAAGATGCGCCCCGATCAGCCCCCC
AAGGAGGCCAGCAACCCTCCCTCTCCTGCTGCCGCTCCTGCCGCCCCGCT
ACTCGTCCTCGCTTGAACCTCCAAAAACGGACTGTGACTGAGGCCGTCTC
CAGCCCCTCCGCCAACACCGAATCCAAGGCTAGCCCATTCGGTGGTGCCC
GTCCGATTGACACCGCCGCTCGTGAGAAGGAGGTTGAGGAACGTCGCCAG
ATTGCCATCCGCCAAAAGAAGGAAGCGGATGAGAAGGCCAAGGCCGAGAA
GCCCGAGAGGACTGAGAAGACCGAAAAGCAGCGTCCTGCCAAGGAGCAGC
CCAAGGCTGAGAAGTCTGGTACACCGGCTGATCCCAACGGCCGCGATGTC
GCCGAGCACGCCCAGGGCGGCACGAACTTCGAGATCCTCCGGCGGGCCGG
TGAGGACGAGAGCGGTATGACTGCCGATCAGGACCAGACGGAGGAGGCCG
CTGCTGCTGCCAAGAATGCCGAAGCCTCGAGCAACGCTGCCCCCAGCAAG
GCGAATGGTAACTGGAGGGCCGGGCCTGCCGAGGCTGGAGCCGACGACGA
GGGCTGGAGCACCGTGAGCTCGAAGCAGCGCAACAACCGCCGTGGCGGCC
GCACGTTTGCATAG back to topCoding sequence (CDS) from alignment at NKJJ01000003.1:1663330..1665093- >CAN33_32390-T1 ID=CAN33_32390-T1|Name=CAN33_32390-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=8424bp|location=Sequence derived from alignment at NKJJ01000003.1:1663330..1665093- (Aspergillus niger FDAARGOS_311) CCCCTCCGCCAACACCGAATCCAAGGCTAGCCCATTCGGTGGTGCCCGTC CGATTGACACCGCCGCTCGTGAGAAGGAGGTTGAGGAACGTCGCCAGATT GCCATCCGCCAAAAGAAGGAAGCGGATGAGAAGGCCAAGGCCGAGAAGCC CGAGAGGACTGAGAAGACCGAAAAGCAGCGTCCTGCCAAGGAGCAGCCCA AGGCTGAGAAGTCTGGTACACCGGCTGATCCCAACGGCCGCGATGTCGCC GAGCACGCCCAGGGCGGCACGAACTTCGAGATCCTCCGGCGGGCCGGTGA GGACGAGAGCGGTATGACTGCCGATCAGGACCAGACGGAGGAGGCCGCTG CTGCTGCCAAGAATGCCGAAGCCTCGAGCAACGCTGCCCCCAGCAAGGCG AATGGTAACTGGAGGGCCGGGCCTGCCGAGGCTGGAGCCGACGACGAGGG CTGGAGCACCGTGAGCTCGAAGCAGCGCAACAACCGCCGTGGCGGCCGCA CGTTTGCATAGCCAAGGAACGTGATGTCAAGGAGTTTGACTGGACCCGCA GAGGTCCTCTGCCCGATATTCCCCAGCGCCGTGTGCCCGATCGTTCCTCT TTCGGACGCAACCTCGACAACGTGTCTGATGCCGGCAGCGAACGGGGTAG TGGCCGCCGCAACTTTGAGAGTGATGGAAAGTTCCGTGATTTCAGCAACT GGGAACGCAAGGGCCCTCTCTCTCCCCCGCCTGCACCTGTCCGGGAAGGT GGCCGTTCCCGCAACGACGAAGGTCCTGGTTTCAGAAGAAGCTCCCCCGC CTGGGGTGAGGGACGCTCCCAGGATGGCTCCCGCCCCCGAGACGCGAATT CCAAGAACGCACCCCCACCGCGGCTGAACTCGATAACGCATGGAGATCCA AGATGCGCCCCGATCAGCCCCCCAAGGAGGCCAGCAACCCTCCCTCTCCT GCTGCCGCTCCTGCCGCCCCGCTACTCCGTGGTGGCTACGCCGTGAGAGA GCCCCTTCCTCTTCCCACCCAGCCCCCTACACTGCCCATGTTGGAAACCT GTCCTTTGATGCGACTGCCGCCGATATCTCCGACCTCTTTGCCGACTGTG GTGTCACCAACGTCCGTATCGTGGAGGACAAGTTGACCAAGGCCCCCAAG GGCTTCGGATATGTCGAATTTGAGACTGTTGATGGTCTGAAGAAGGCTCT TGATCTTTCCGGCGCTACCCTCCAGGGACGTGCCATCCGCACCAGCATTG CCGAACCTCCTCCCGCCCCGTCCAGCTTCGGCCGCTCTGCTGCGCCTTCT TCTGGTTTCGGAAGCAGCTTTGGTGGTGACTTCGGCTCTTGGGCTGATGA GATGGAGGACATGCCTTTGCCTGATGTCTCTGGGCAACTTCTTGGCCGAT GAGACCCCTCCGCCAACACCGAATCCAAGGCTAGCCCATTCGGTGGTGCC CGTCCGATTGACACCGCCGCTCGTGAGAAGGAGGTTGAGGAACGTCGCCA GATTGCCATCCGCCAAAAGAAGGAAGCGGATGAGAAGGCCAAGGCCGAGA AGCCCGAGAGGACTGAGAAGACCGAAAAGCAGCGTCCTGCCAAGGAGCAG CCCAAGGCTGAGAAGTCTGGTACACCGGCTGATCCCAACGGCCGCGATGT CGCCGAGCACGCCCAGGGCGGCACGAACTTCGAGATCCTCCGGCGGGCCG GTGAGGACGAGAGCGGTATGACTGCCGATCAGGACCAGACGGAGGAGGCC GCTGCTGCTGCCAAGAATGCCGAAGCCTCGAGCAACGCTGCCCCCAGCAA GGCGAATGGTAACTGGAGGGCCGGGCCTGCCGAGGCTGGAGCCGACGACG AGGGCTGGAGCACCGTGAGCTCGAAGCAGCGCAACAACCGCCGTGGCGGC CGCACGTTTGCATAGCCAAGGAACGTGATGTCAAGGAGTTTGACTGGACC CGCAGAGGTCCTCTGCCCGATATTCCCCAGCGCCGTGTGCCCGATCGTTC CTCTTTCGGACGCAACCTCGACAACGTGTCTGATGCCGGCAGCGAACGGG GTAGTGGCCGCCGCAACTTTGAGAGTGATGGAAAGTTCCGTGATTTCAGC AACTGGGAACGCAAGGGCCCTCTCTCTCCCCCGCCTGCACCTGTCCGGGA AGGTGGCCGTTCCCGCAACGACGAAGGTCCTGGTTTCAGAAGAAGCTCCC CCGCCTGGGGTGAGGGACGCTCCCAGGATGGCTCCCGCCCCCGAGACGCG AATTCCAAGAACGCACCCCCACCGCGGCTGAACTCGATAACGCATGGAGA TCCAAGATGCGCCCCGATCAGCCCCCCAAGGAGGCCAGCAACCCTCCCTC TCCTGCTGCCGCTCCTGCCGCCCCGCTACTCCGTGGTGGCTACGCCGTGA GAGAGCCCCTTCCTCTTCCCACCCAGCCCCCTACACTGCCCATGTTGGAA ACCTGTCCTTTGATGCGACTGCCGCCGATATCTCCGACCTCTTTGCCGAC TGTGGTGTCACCAACGTCCGTATCGTGGAGGACAAGTTGACCAAGGCCCC CAAGGGCTTCGGATATGTCGAATTTGAGACTGTTGATGGTCTGAAGAAGG CTCTTGATCTTTCCGGCGCTACCCTCCAGGGACGTGCCATCCGCACCAGC ATTGCCGAACCTCCTCCCGCCCCGTCCAGCTTCGGCCGCTCTGCTGCGCC TTCTTCTGGTTTCGGAAGCAGCTTTGGTGGTGACTTCGGCTCTTGGGCTG ATGAGATGGAGGACATGCCTTTGCCTGATGTCTCTGGGCAACTTCTTGGC CGATGAGACCCCTCCGCCAACACCGAATCCAAGGCTAGCCCATTCGGTGG TGCCCGTCCGATTGACACCGCCGCTCGTGAGAAGGAGGTTGAGGAACGTC GCCAGATTGCCATCCGCCAAAAGAAGGAAGCGGATGAGAAGGCCAAGGCC GAGAAGCCCGAGAGGACTGAGAAGACCGAAAAGCAGCGTCCTGCCAAGGA GCAGCCCAAGGCTGAGAAGTCTGGTACACCGGCTGATCCCAACGGCCGCG ATGTCGCCGAGCACGCCCAGGGCGGCACGAACTTCGAGATCCTCCGGCGG GCCGGTGAGGACGAGAGCGGTATGACTGCCGATCAGGACCAGACGGAGGA GGCCGCTGCTGCTGCCAAGAATGCCGAAGCCTCGAGCAACGCTGCCCCCA GCAAGGCGAATGGTAACTGGAGGGCCGGGCCTGCCGAGGCTGGAGCCGAC GACGAGGGCTGGAGCACCGTGAGCTCGAAGCAGCGCAACAACCGCCGTGG CGGCCGCACGTTTGCATAGCCAAGGAACGTGATGTCAAGGAGTTTGACTG GACCCGCAGAGGTCCTCTGCCCGATATTCCCCAGCGCCGTGTGCCCGATC GTTCCTCTTTCGGACGCAACCTCGACAACGTGTCTGATGCCGGCAGCGAA CGGGGTAGTGGCCGCCGCAACTTTGAGAGTGATGGAAAGTTCCGTGATTT CAGCAACTGGGAACGCAAGGGCCCTCTCTCTCCCCCGCCTGCACCTGTCC GGGAAGGTGGCCGTTCCCGCAACGACGAAGGTCCTGGTTTCAGAAGAAGC TCCCCCGCCTGGGGTGAGGGACGCTCCCAGGATGGCTCCCGCCCCCGAGA CGCGAATTCCAAGAACGCACCCCCACCGCGGCTGAACTCGATAACGCATG GAGATCCAAGATGCGCCCCGATCAGCCCCCCAAGGAGGCCAGCAACCCTC CCTCTCCTGCTGCCGCTCCTGCCGCCCCGCTACTCCGTGGTGGCTACGCC GTGAGAGAGCCCCTTCCTCTTCCCACCCAGCCCCCTACACTGCCCATGTT GGAAACCTGTCCTTTGATGCGACTGCCGCCGATATCTCCGACCTCTTTGC CGACTGTGGTGTCACCAACGTCCGTATCGTGGAGGACAAGTTGACCAAGG CCCCCAAGGGCTTCGGATATGTCGAATTTGAGACTGTTGATGGTCTGAAG AAGGCTCTTGATCTTTCCGGCGCTACCCTCCAGGGACGTGCCATCCGCAC CAGCATTGCCGAACCTCCTCCCGCCCCGTCCAGCTTCGGCCGCTCTGCTG CGCCTTCTTCTGGTTTCGGAAGCAGCTTTGGTGGTGACTTCGGCTCTTGG GCTGATGAGATGGAGGACATGCCTTTGCCTGATGTCTCTGGGCAACTTCT TGGCCGATGAGACCCCTCCGCCAACACCGAATCCAAGGCTAGCCCATTCG GTGGTGCCCGTCCGATTGACACCGCCGCTCGTGAGAAGGAGGTTGAGGAA CGTCGCCAGATTGCCATCCGCCAAAAGAAGGAAGCGGATGAGAAGGCCAA GGCCGAGAAGCCCGAGAGGACTGAGAAGACCGAAAAGCAGCGTCCTGCCA AGGAGCAGCCCAAGGCTGAGAAGTCTGGTACACCGGCTGATCCCAACGGC CGCGATGTCGCCGAGCACGCCCAGGGCGGCACGAACTTCGAGATCCTCCG GCGGGCCGGTGAGGACGAGAGCGGTATGACTGCCGATCAGGACCAGACGG AGGAGGCCGCTGCTGCTGCCAAGAATGCCGAAGCCTCGAGCAACGCTGCC CCCAGCAAGGCGAATGGTAACTGGAGGGCCGGGCCTGCCGAGGCTGGAGC CGACGACGAGGGCTGGAGCACCGTGAGCTCGAAGCAGCGCAACAACCGCC GTGGCGGCCGCACGTTTGCATAGCCAAGGAACGTGATGTCAAGGAGTTTG ACTGGACCCGCAGAGGTCCTCTGCCCGATATTCCCCAGCGCCGTGTGCCC GATCGTTCCTCTTTCGGACGCAACCTCGACAACGTGTCTGATGCCGGCAG CGAACGGGGTAGTGGCCGCCGCAACTTTGAGAGTGATGGAAAGTTCCGTG ATTTCAGCAACTGGGAACGCAAGGGCCCTCTCTCTCCCCCGCCTGCACCT GTCCGGGAAGGTGGCCGTTCCCGCAACGACGAAGGTCCTGGTTTCAGAAG AAGCTCCCCCGCCTGGGGTGAGGGACGCTCCCAGGATGGCTCCCGCCCCC GAGACGCGAATTCCAAGAACGCACCCCCACCGCGGCTGAACTCGATAACG CATGGAGATCCAAGATGCGCCCCGATCAGCCCCCCAAGGAGGCCAGCAAC CCTCCCTCTCCTGCTGCCGCTCCTGCCGCCCCGCTACTCCGTGGTGGCTA CGCCGTGAGAGAGCCCCTTCCTCTTCCCACCCAGCCCCCTACACTGCCCA TGTTGGAAACCTGTCCTTTGATGCGACTGCCGCCGATATCTCCGACCTCT TTGCCGACTGTGGTGTCACCAACGTCCGTATCGTGGAGGACAAGTTGACC AAGGCCCCCAAGGGCTTCGGATATGTCGAATTTGAGACTGTTGATGGTCT GAAGAAGGCTCTTGATCTTTCCGGCGCTACCCTCCAGGGACGTGCCATCC GCACCAGCATTGCCGAACCTCCTCCCGCCCCGTCCAGCTTCGGCCGCTCT GCTGCGCCTTCTTCTGGTTTCGGAAGCAGCTTTGGTGGTGACTTCGGCTC TTGGGCTGATGAGATGGAGGACATGCCTTTGCCTGATGTCTCTGGGCAAC TTCTTGGCCGATGAGACCCCTCCGCCAACACCGAATCCAAGGCTAGCCCA TTCGGTGGTGCCCGTCCGATTGACACCGCCGCTCGTGAGAAGGAGGTTGA GGAACGTCGCCAGATTGCCATCCGCCAAAAGAAGGAAGCGGATGAGAAGG CCAAGGCCGAGAAGCCCGAGAGGACTGAGAAGACCGAAAAGCAGCGTCCT GCCAAGGAGCAGCCCAAGGCTGAGAAGTCTGGTACACCGGCTGATCCCAA CGGCCGCGATGTCGCCGAGCACGCCCAGGGCGGCACGAACTTCGAGATCC TCCGGCGGGCCGGTGAGGACGAGAGCGGTATGACTGCCGATCAGGACCAG ACGGAGGAGGCCGCTGCTGCTGCCAAGAATGCCGAAGCCTCGAGCAACGC TGCCCCCAGCAAGGCGAATGGTAACTGGAGGGCCGGGCCTGCCGAGGCTG GAGCCGACGACGAGGGCTGGAGCACCGTGAGCTCGAAGCAGCGCAACAAC CGCCGTGGCGGCCGCACGTTTGCATAGCCAAGGAACGTGATGTCAAGGAG TTTGACTGGACCCGCAGAGGTCCTCTGCCCGATATTCCCCAGCGCCGTGT GCCCGATCGTTCCTCTTTCGGACGCAACCTCGACAACGTGTCTGATGCCG GCAGCGAACGGGGTAGTGGCCGCCGCAACTTTGAGAGTGATGGAAAGTTC CGTGATTTCAGCAACTGGGAACGCAAGGGCCCTCTCTCTCCCCCGCCTGC ACCTGTCCGGGAAGGTGGCCGTTCCCGCAACGACGAAGGTCCTGGTTTCA GAAGAAGCTCCCCCGCCTGGGGTGAGGGACGCTCCCAGGATGGCTCCCGC CCCCGAGACGCGAATTCCAAGAACGCACCCCCACCGCGGCTGAACTCGAT AACGCATGGAGATCCAAGATGCGCCCCGATCAGCCCCCCAAGGAGGCCAG CAACCCTCCCTCTCCTGCTGCCGCTCCTGCCGCCCCGCTACTCCGTGGTG GCTACGCCGTGAGAGAGCCCCTTCCTCTTCCCACCCAGCCCCCTACACTG CCCATGTTGGAAACCTGTCCTTTGATGCGACTGCCGCCGATATCTCCGAC CTCTTTGCCGACTGTGGTGTCACCAACGTCCGTATCGTGGAGGACAAGTT GACCAAGGCCCCCAAGGGCTTCGGATATGTCGAATTTGAGACTGTTGATG GTCTGAAGAAGGCTCTTGATCTTTCCGGCGCTACCCTCCAGGGACGTGCC ATCCGCACCAGCATTGCCGAACCTCCTCCCGCCCCGTCCAGCTTCGGCCG CTCTGCTGCGCCTTCTTCTGGTTTCGGAAGCAGCTTTGGTGGTGACTTCG GCTCTTGGGCTGATGAGATGGAGGACATGCCTTTGCCTGATGTCTCTGGG CAACTTCTTGGCCGATGAGACCCCTCCGCCAACACCGAATCCAAGGCTAG CCCATTCGGTGGTGCCCGTCCGATTGACACCGCCGCTCGTGAGAAGGAGG TTGAGGAACGTCGCCAGATTGCCATCCGCCAAAAGAAGGAAGCGGATGAG AAGGCCAAGGCCGAGAAGCCCGAGAGGACTGAGAAGACCGAAAAGCAGCG TCCTGCCAAGGAGCAGCCCAAGGCTGAGAAGTCTGGTACACCGGCTGATC CCAACGGCCGCGATGTCGCCGAGCACGCCCAGGGCGGCACGAACTTCGAG ATCCTCCGGCGGGCCGGTGAGGACGAGAGCGGTATGACTGCCGATCAGGA CCAGACGGAGGAGGCCGCTGCTGCTGCCAAGAATGCCGAAGCCTCGAGCA ACGCTGCCCCCAGCAAGGCGAATGGTAACTGGAGGGCCGGGCCTGCCGAG GCTGGAGCCGACGACGAGGGCTGGAGCACCGTGAGCTCGAAGCAGCGCAA CAACCGCCGTGGCGGCCGCACGTTTGCATAGCCAAGGAACGTGATGTCAA GGAGTTTGACTGGACCCGCAGAGGTCCTCTGCCCGATATTCCCCAGCGCC GTGTGCCCGATCGTTCCTCTTTCGGACGCAACCTCGACAACGTGTCTGAT GCCGGCAGCGAACGGGGTAGTGGCCGCCGCAACTTTGAGAGTGATGGAAA GTTCCGTGATTTCAGCAACTGGGAACGCAAGGGCCCTCTCTCTCCCCCGC CTGCACCTGTCCGGGAAGGTGGCCGTTCCCGCAACGACGAAGGTCCTGGT TTCAGAAGAAGCTCCCCCGCCTGGGGTGAGGGACGCTCCCAGGATGGCTC CCGCCCCCGAGACGCGAATTCCAAGAACGCACCCCCACCGCGGCTGAACT CGATAACGCATGGAGATCCAAGATGCGCCCCGATCAGCCCCCCAAGGAGG CCAGCAACCCTCCCTCTCCTGCTGCCGCTCCTGCCGCCCCGCTACTCCGT GGTGGCTACGCCGTGAGAGAGCCCCTTCCTCTTCCCACCCAGCCCCCTAC ACTGCCCATGTTGGAAACCTGTCCTTTGATGCGACTGCCGCCGATATCTC CGACCTCTTTGCCGACTGTGGTGTCACCAACGTCCGTATCGTGGAGGACA AGTTGACCAAGGCCCCCAAGGGCTTCGGATATGTCGAATTTGAGACTGTT GATGGTCTGAAGAAGGCTCTTGATCTTTCCGGCGCTACCCTCCAGGGACG TGCCATCCGCACCAGCATTGCCGAACCTCCTCCCGCCCCGTCCAGCTTCG GCCGCTCTGCTGCGCCTTCTTCTGGTTTCGGAAGCAGCTTTGGTGGTGAC TTCGGCTCTTGGGCTGATGAGATGGAGGACATGCCTTTGCCTGATGTCTC TGGGCAACTTCTTGGCCGATGAGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
| GO:0003676 | nucleic acid binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
| DBxref | InterPro:IPR035979 |
| DBxref | InterPro:IPR012677 |
| DBxref | InterPro:IPR000504 |
| DBxref | PFAM:PF00076 |
| Product | RNA recognition motif family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
| NKJJ01000003.1 | supercontig | NKJJ01000003.1:1663330..1665093 - |
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