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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000003.1:1700248..1701890- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_32445-T1 ID=CAN33_32445-T1|Name=CAN33_32445-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1643bp|location=Sequence derived from alignment at NKJJ01000003.1:1700248..1701890- (Aspergillus niger FDAARGOS_311)
ATGGCAGCCAACAGCTACTACCATGGCGGTTACAGCAGCAACCCGCCTAC
CTATGAGCAAGCTAATCCTCACTTCGATCCCATTCCGACCCCAGGCCATC
CTGACTTCCACACACATCCTTACGAGCCCACGGCAGCCGAACCTCAACTT
CACCACAGTCAACAATCTCTCGGTTCCGACCAAGCTTATGCGGCCGGTGG
AAGACTGAATGAGGAACCCTACTCTGAGAATATCCCGCTGAAGAGCAATC
AATATGCAAATGGATCTCCGCCGCCGAACTGGATGCACCAACCCACTCAT
TATTCGCCCACGCCCGAAGATATCGAACCGCCGGTCGCTCCGACAGCGCG
GAGGAATAGGAACAGGAAGAAGGGGTTTTTCAAAAAGAAGATTCCGTGGG
TAACGTATACGTTTACGTTGGTCCAGATCATCGTGTTCATTGTGGAACTG
GTGAAGAATGGTATGTCAGGTCGGCCAAAAGGTCCCTTGGAATCCATCTG
ACAACTCTGCAGCTCAATTTACAGGCTCTCCTATCGAGACGAAACCATCA
TTCAACGTAATGATCGGACCATCCCCGTACGTGCAAATCTACATGGGGTC
GCGGTACACACCATGCATGAAGAACGTCCCTGGCATCCAGAACGCCAACG
AAACAGTTCTCTTCCCTTGCCCGAACGCTACCGCGTCGGTGGCTGAGTGC
ACGCTATCTGAGGCGTGCGGCTTCAGCGGTGTACCGAATCCTCACCCGCA
CGGATCGCTTGACGACAAACCGGAACCCAACCAATGGTTCCGCTTCATTA
TTCCCATGTTCATCCACACTGGATTTGTCCATATCGGCTTCAACTTGATC
GTGCAAATGACTATGGGAGTTGACATGGAGCGGATGATCGGCTGGTGGAG
GTATTTCGTGGTGTATGTGGCCAGTGGAATCTGGGGCTTTGTTTTGGGCG
GCAACTATGCCGGGCAGGGCGAAGCGTCGTGCGGCTGCTCCGGTGCTCTG
TTCGGTATTCTCGCTCTATTCATCTTGGATCTCCTCTATACATGGAAGGA
CCGTCCTTCTCCTTGGGTGGAGATGATCATTATGATCCTAGGTATTGCAG
TGTCCTTCGTGTTGGGGCTTTTGCCGGGATTGGATAATTTTGCCCACATT
GGAGGCTTCATCATGGGACTGGCTCTGGGCTTGTGTCTTCTTCGGTCGCC
TAACGCGCTGCGCGAGCGGATTGGCCTGGCGCGGAACCCGTACGTTGCCA
TGAGCGGCGGGGCCGGCACTCCCACGCCCGATGACAACCAGAAGGTGAAT
ACTGGGCCCAGCCTGGTTGATTTCCTAAAAGGACGTCGGACTCGCACCGG
AGCAGGCGCCAGCAACAACAAGTTGAACCCAGTGAACTTCTTCCGGGGCC
GGAAGCCATTATGGTGGGCATGGTGGCTGGTGCGCGCGGGTGCCTTGGTC
GCCGTGCTCGTCGGCTTTATTCTCCTGATTGTCGATTTCTATAAGTATCC
CAAGTCCAACTGTTCCTGGTGCTACCGATTAAGTTGTCTGGTAAGTAACG
CAATGCTGGTGGATCACGCTTATGCTAACTGTATCGCAGCCTGTCAATGG
ATGGTGTGAAGAAGGCCAATTGACGACAACGAAGACATCCTGA back to topCoding sequence (CDS) from alignment at NKJJ01000003.1:1700248..1701890- >CAN33_32445-T1 ID=CAN33_32445-T1|Name=CAN33_32445-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4626bp|location=Sequence derived from alignment at NKJJ01000003.1:1700248..1701890- (Aspergillus niger FDAARGOS_311)
CCTGTCAATGGATGGTGTGAAGAAGGCCAATTGACGACAACGAAGACATC
CTGACTCAATTTACAGGCTCTCCTATCGAGACGAAACCATCATTCAACGT
AATGATCGGACCATCCCCGTACGTGCAAATCTACATGGGGTCGCGGTACA
CACCATGCATGAAGAACGTCCCTGGCATCCAGAACGCCAACGAAACAGTT
CTCTTCCCTTGCCCGAACGCTACCGCGTCGGTGGCTGAGTGCACGCTATC
TGAGGCGTGCGGCTTCAGCGGTGTACCGAATCCTCACCCGCACGGATCGC
TTGACGACAAACCGGAACCCAACCAATGGTTCCGCTTCATTATTCCCATG
TTCATCCACACTGGATTTGTCCATATCGGCTTCAACTTGATCGTGCAAAT
GACTATGGGAGTTGACATGGAGCGGATGATCGGCTGGTGGAGGTATTTCG
TGGTGTATGTGGCCAGTGGAATCTGGGGCTTTGTTTTGGGCGGCAACTAT
GCCGGGCAGGGCGAAGCGTCGTGCGGCTGCTCCGGTGCTCTGTTCGGTAT
TCTCGCTCTATTCATCTTGGATCTCCTCTATACATGGAAGGACCGTCCTT
CTCCTTGGGTGGAGATGATCATTATGATCCTAGGTATTGCAGTGTCCTTC
GTGTTGGGGCTTTTGCCGGGATTGGATAATTTTGCCCACATTGGAGGCTT
CATCATGGGACTGGCTCTGGGCTTGTGTCTTCTTCGGTCGCCTAACGCGC
TGCGCGAGCGGATTGGCCTGGCGCGGAACCCGTACGTTGCCATGAGCGGC
GGGGCCGGCACTCCCACGCCCGATGACAACCAGAAGGTGAATACTGGGCC
CAGCCTGGTTGATTTCCTAAAAGGACGTCGGACTCGCACCGGAGCAGGCG
CCAGCAACAACAAGTTGAACCCAGTGAACTTCTTCCGGGGCCGGAAGCCA
TTATGGTGGGCATGGTGGCTGGTGCGCGCGGGTGCCTTGGTCGCCGTGCT
CGTCGGCTTTATTCTCCTGATTGTCGATTTCTATAAGTATCCCAAGTCCA
ACTGTTCCTGGTGCTACCGATTAAGTTGTCTGATGGCAGCCAACAGCTAC
TACCATGGCGGTTACAGCAGCAACCCGCCTACCTATGAGCAAGCTAATCC
TCACTTCGATCCCATTCCGACCCCAGGCCATCCTGACTTCCACACACATC
CTTACGAGCCCACGGCAGCCGAACCTCAACTTCACCACAGTCAACAATCT
CTCGGTTCCGACCAAGCTTATGCGGCCGGTGGAAGACTGAATGAGGAACC
CTACTCTGAGAATATCCCGCTGAAGAGCAATCAATATGCAAATGGATCTC
CGCCGCCGAACTGGATGCACCAACCCACTCATTATTCGCCCACGCCCGAA
GATATCGAACCGCCGGTCGCTCCGACAGCGCGGAGGAATAGGAACAGGAA
GAAGGGGTTTTTCAAAAAGAAGATTCCGTGGGTAACGTATACGTTTACGT
TGGTCCAGATCATCGTGTTCATTGTGGAACTGGTGAAGAATGCCTGTCAA
TGGATGGTGTGAAGAAGGCCAATTGACGACAACGAAGACATCCTGACTCA
ATTTACAGGCTCTCCTATCGAGACGAAACCATCATTCAACGTAATGATCG
GACCATCCCCGTACGTGCAAATCTACATGGGGTCGCGGTACACACCATGC
ATGAAGAACGTCCCTGGCATCCAGAACGCCAACGAAACAGTTCTCTTCCC
TTGCCCGAACGCTACCGCGTCGGTGGCTGAGTGCACGCTATCTGAGGCGT
GCGGCTTCAGCGGTGTACCGAATCCTCACCCGCACGGATCGCTTGACGAC
AAACCGGAACCCAACCAATGGTTCCGCTTCATTATTCCCATGTTCATCCA
CACTGGATTTGTCCATATCGGCTTCAACTTGATCGTGCAAATGACTATGG
GAGTTGACATGGAGCGGATGATCGGCTGGTGGAGGTATTTCGTGGTGTAT
GTGGCCAGTGGAATCTGGGGCTTTGTTTTGGGCGGCAACTATGCCGGGCA
GGGCGAAGCGTCGTGCGGCTGCTCCGGTGCTCTGTTCGGTATTCTCGCTC
TATTCATCTTGGATCTCCTCTATACATGGAAGGACCGTCCTTCTCCTTGG
GTGGAGATGATCATTATGATCCTAGGTATTGCAGTGTCCTTCGTGTTGGG
GCTTTTGCCGGGATTGGATAATTTTGCCCACATTGGAGGCTTCATCATGG
GACTGGCTCTGGGCTTGTGTCTTCTTCGGTCGCCTAACGCGCTGCGCGAG
CGGATTGGCCTGGCGCGGAACCCGTACGTTGCCATGAGCGGCGGGGCCGG
CACTCCCACGCCCGATGACAACCAGAAGGTGAATACTGGGCCCAGCCTGG
TTGATTTCCTAAAAGGACGTCGGACTCGCACCGGAGCAGGCGCCAGCAAC
AACAAGTTGAACCCAGTGAACTTCTTCCGGGGCCGGAAGCCATTATGGTG
GGCATGGTGGCTGGTGCGCGCGGGTGCCTTGGTCGCCGTGCTCGTCGGCT
TTATTCTCCTGATTGTCGATTTCTATAAGTATCCCAAGTCCAACTGTTCC
TGGTGCTACCGATTAAGTTGTCTGATGGCAGCCAACAGCTACTACCATGG
CGGTTACAGCAGCAACCCGCCTACCTATGAGCAAGCTAATCCTCACTTCG
ATCCCATTCCGACCCCAGGCCATCCTGACTTCCACACACATCCTTACGAG
CCCACGGCAGCCGAACCTCAACTTCACCACAGTCAACAATCTCTCGGTTC
CGACCAAGCTTATGCGGCCGGTGGAAGACTGAATGAGGAACCCTACTCTG
AGAATATCCCGCTGAAGAGCAATCAATATGCAAATGGATCTCCGCCGCCG
AACTGGATGCACCAACCCACTCATTATTCGCCCACGCCCGAAGATATCGA
ACCGCCGGTCGCTCCGACAGCGCGGAGGAATAGGAACAGGAAGAAGGGGT
TTTTCAAAAAGAAGATTCCGTGGGTAACGTATACGTTTACGTTGGTCCAG
ATCATCGTGTTCATTGTGGAACTGGTGAAGAATGCCTGTCAATGGATGGT
GTGAAGAAGGCCAATTGACGACAACGAAGACATCCTGACTCAATTTACAG
GCTCTCCTATCGAGACGAAACCATCATTCAACGTAATGATCGGACCATCC
CCGTACGTGCAAATCTACATGGGGTCGCGGTACACACCATGCATGAAGAA
CGTCCCTGGCATCCAGAACGCCAACGAAACAGTTCTCTTCCCTTGCCCGA
ACGCTACCGCGTCGGTGGCTGAGTGCACGCTATCTGAGGCGTGCGGCTTC
AGCGGTGTACCGAATCCTCACCCGCACGGATCGCTTGACGACAAACCGGA
ACCCAACCAATGGTTCCGCTTCATTATTCCCATGTTCATCCACACTGGAT
TTGTCCATATCGGCTTCAACTTGATCGTGCAAATGACTATGGGAGTTGAC
ATGGAGCGGATGATCGGCTGGTGGAGGTATTTCGTGGTGTATGTGGCCAG
TGGAATCTGGGGCTTTGTTTTGGGCGGCAACTATGCCGGGCAGGGCGAAG
CGTCGTGCGGCTGCTCCGGTGCTCTGTTCGGTATTCTCGCTCTATTCATC
TTGGATCTCCTCTATACATGGAAGGACCGTCCTTCTCCTTGGGTGGAGAT
GATCATTATGATCCTAGGTATTGCAGTGTCCTTCGTGTTGGGGCTTTTGC
CGGGATTGGATAATTTTGCCCACATTGGAGGCTTCATCATGGGACTGGCT
CTGGGCTTGTGTCTTCTTCGGTCGCCTAACGCGCTGCGCGAGCGGATTGG
CCTGGCGCGGAACCCGTACGTTGCCATGAGCGGCGGGGCCGGCACTCCCA
CGCCCGATGACAACCAGAAGGTGAATACTGGGCCCAGCCTGGTTGATTTC
CTAAAAGGACGTCGGACTCGCACCGGAGCAGGCGCCAGCAACAACAAGTT
GAACCCAGTGAACTTCTTCCGGGGCCGGAAGCCATTATGGTGGGCATGGT
GGCTGGTGCGCGCGGGTGCCTTGGTCGCCGTGCTCGTCGGCTTTATTCTC
CTGATTGTCGATTTCTATAAGTATCCCAAGTCCAACTGTTCCTGGTGCTA
CCGATTAAGTTGTCTGATGGCAGCCAACAGCTACTACCATGGCGGTTACA
GCAGCAACCCGCCTACCTATGAGCAAGCTAATCCTCACTTCGATCCCATT
CCGACCCCAGGCCATCCTGACTTCCACACACATCCTTACGAGCCCACGGC
AGCCGAACCTCAACTTCACCACAGTCAACAATCTCTCGGTTCCGACCAAG
CTTATGCGGCCGGTGGAAGACTGAATGAGGAACCCTACTCTGAGAATATC
CCGCTGAAGAGCAATCAATATGCAAATGGATCTCCGCCGCCGAACTGGAT
GCACCAACCCACTCATTATTCGCCCACGCCCGAAGATATCGAACCGCCGG
TCGCTCCGACAGCGCGGAGGAATAGGAACAGGAAGAAGGGGTTTTTCAAA
AAGAAGATTCCGTGGGTAACGTATACGTTTACGTTGGTCCAGATCATCGT
GTTCATTGTGGAACTGGTGAAGAATG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Vocabulary: Molecular Function
| Term | Definition |
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| GO:0004252 | serine-type endopeptidase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| Note | MEROPS:MER0094384 |
| DBxref | InterPro:IPR035952 |
| DBxref | InterPro:IPR022764 |
| DBxref | PFAM:PF01694 |
| Product | Rhomboid family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000003.1 | supercontig | NKJJ01000003.1:1700248..1701890 - |
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