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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000003.1:1761751..1763376- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_32540-T1 ID=CAN33_32540-T1|Name=CAN33_32540-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1626bp|location=Sequence derived from alignment at NKJJ01000003.1:1761751..1763376- (Aspergillus niger FDAARGOS_311)
ATGACCCTCCTTCGTCATCTCTTAACGGCAACTGCCTTGCTCGGAGCTTC
AGTCCAAGCAGCGCAGGGTGTCACTGGCTCCCCCTTCGGTTTCGCTAGCG
GCACGACCGGTGGCGGTGATGCCACTCCCGCTGCGCCCAGCGACATCAGC
CAGCTGAAGACCTGGTTGTCTGACAGCACCCCCCGTGTCATCCTTATCGA
CAAGGAGTTCAACTTCCTTGGCAGCGAGGGCAAGTGCACCAACTGCGAGT
GCTGCAAACCCGCCTCGAACACCTGCGGTAGCTCTGGCCAGAATGCCGTC
AAGCAGAATGGCTCCGACTGGTGCGGTAGCTATCCCACCCTGACCTGCAC
GTACGACAACGCCGGTATTGAGGGCCTGGAAGTCGCCTCCAACAAGTCTA
TTGTTGGCGTGGGTAGCTCTGGTGTCCTGCGTGGAAAGGGTCTGCGCCTG
GTGAACGGTGTCAGCAACATCATTATCCAGAACATCCACATCACGGAGCT
CAACCCCGAGTTCATCTGGGGTGGTGACGCTATCACCCTCGACGGCACCA
ACAACGTCTGGATTGACCACGTCAAGATCAACCTCATTGGTCGTCAGATG
TTCGTTGCCGGATACGAAGCCAGTATGTTTCCAAAAATAGATGTACATTG
TTTGGATTCAAAACTGACAGTGCGCAGGTCACAGCGTTACCATCTCGAAC
AGCGAGTTTGATGGTGAGACCAGCTGGTCTGCGACTTGCGACGGCCACCA
CTACTGGACTGTGTAAGTTCCATGTCGTCCCACGCGCTCCTCCTTCATTA
CAACATCCTAACACTATCTAGTCTCGGATACGGCCACAATGACAAGATCA
CCTTCGCCAACAACTACATCCACCACACTTCGGGCCGTTCCCCCAAGCTT
GAGTTCAACAGCTTCTGGCACGCGTACAACAACTACTGGTACAACAACAC
TGGCCATGCCTTCGATGTTGGCAAGAACACCCGTGCTCTGATCGAGGGTA
ATGTGATGGTCCAGGTCGACACTCCTCTCTTGGCCGACAGCAACCCCGGT
GCCGTATTCGCCGTGAACACCAGCGATGTTTCCACCTGCACCAGCACCCT
CGGACGCACCTGTGTCCCCAACACTTTGATCAGCTCCGGTACTCTCTCCG
GTAGTGACAGCTCTGTGATCAGCAGCTGGCCCTCTGGTGAGTCCGACGTC
ACCGTCATGGCTGCTAGCAAAGTTGCTTCCTACGTCAAGGCCAACGCCGG
TATTGGTAAGCTCGGCAACGGATCTGGCTCCTCCAGCACCGTCGGCGCGG
CCGCCACCTCCGCTGTCGCCAAGCGTGCCGACTCTGACGATGCTCCTTTT
GTCCCGGCCTACTCTGAGGCTGGCCCCGGCGCTTCCGCTGTCCCCACCCA
GCCCTCCTGGTCTTGGAGGACAGTCACCAACGGCCCTGCTCCCACTGGAG
CTCCCTCTGATAGCCCCTCGGCCCCCAGGGTCTTGGTGCTCCTGTCCAGG
CTTCGAACAAGCACCACCACCAGGGACACGGCCGTGGCTACTAAAGGGAA
TTTGTGGGTTCGCTTCTGCGCTGCCAAGCTGACAATGAAGCAAGCTGAGA
TAATTCCCATTTTCAACGGTCTGTGA back to topCoding sequence (CDS) from alignment at NKJJ01000003.1:1761751..1763376- >CAN33_32540-T1 ID=CAN33_32540-T1|Name=CAN33_32540-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4536bp|location=Sequence derived from alignment at NKJJ01000003.1:1761751..1763376- (Aspergillus niger FDAARGOS_311)
TCTCGGATACGGCCACAATGACAAGATCACCTTCGCCAACAACTACATCC
ACCACACTTCGGGCCGTTCCCCCAAGCTTGAGTTCAACAGCTTCTGGCAC
GCGTACAACAACTACTGGTACAACAACACTGGCCATGCCTTCGATGTTGG
CAAGAACACCCGTGCTCTGATCGAGGGTAATGTGATGGTCCAGGTCGACA
CTCCTCTCTTGGCCGACAGCAACCCCGGTGCCGTATTCGCCGTGAACACC
AGCGATGTTTCCACCTGCACCAGCACCCTCGGACGCACCTGTGTCCCCAA
CACTTTGATCAGCTCCGGTACTCTCTCCGGTAGTGACAGCTCTGTGATCA
GCAGCTGGCCCTCTGGTGAGTCCGACGTCACCGTCATGGCTGCTAGCAAA
GTTGCTTCCTACGTCAAGGCCAACGCCGGTATTGGTAAGCTCGGCAACGG
ATCTGGCTCCTCCAGCACCGTCGGCGCGGCCGCCACCTCCGCTGTCGCCA
AGCGTGCCGACTCTGACGATGCTCCTTTTGTCCCGGCCTACTCTGAGGCT
GGCCCCGGCGCTTCCGCTGTCCCCACCCAGCCCTCCTGGTCTTGGAGGAC
AGTCACCAACGGCCCTGCTCCCACTGGAGCTCCCTCTGATAGCCCCTCGG
CCCCCAGGGTCTTGGTGCTCCTGTCCAGGCTTCGAACAAGCACCACCACC
AGGGACACGGCCGTGGCTACTAAAGGGAATTTGTGGGTTCGCTTCTGCGC
TGCCAAGCTGACAATGAAGCAAGCTGAGATAATTCCCATTTTCAACGGTC
TGTGAGTCACAGCGTTACCATCTCGAACAGCGAGTTTGATGGTGAGACCA
GCTGGTCTGCGACTTGCGACGGCCACCACTACTGGACTGTATGACCCTCC
TTCGTCATCTCTTAACGGCAACTGCCTTGCTCGGAGCTTCAGTCCAAGCA
GCGCAGGGTGTCACTGGCTCCCCCTTCGGTTTCGCTAGCGGCACGACCGG
TGGCGGTGATGCCACTCCCGCTGCGCCCAGCGACATCAGCCAGCTGAAGA
CCTGGTTGTCTGACAGCACCCCCCGTGTCATCCTTATCGACAAGGAGTTC
AACTTCCTTGGCAGCGAGGGCAAGTGCACCAACTGCGAGTGCTGCAAACC
CGCCTCGAACACCTGCGGTAGCTCTGGCCAGAATGCCGTCAAGCAGAATG
GCTCCGACTGGTGCGGTAGCTATCCCACCCTGACCTGCACGTACGACAAC
GCCGGTATTGAGGGCCTGGAAGTCGCCTCCAACAAGTCTATTGTTGGCGT
GGGTAGCTCTGGTGTCCTGCGTGGAAAGGGTCTGCGCCTGGTGAACGGTG
TCAGCAACATCATTATCCAGAACATCCACATCACGGAGCTCAACCCCGAG
TTCATCTGGGGTGGTGACGCTATCACCCTCGACGGCACCAACAACGTCTG
GATTGACCACGTCAAGATCAACCTCATTGGTCGTCAGATGTTCGTTGCCG
GATACGAAGCCATCTCGGATACGGCCACAATGACAAGATCACCTTCGCCA
ACAACTACATCCACCACACTTCGGGCCGTTCCCCCAAGCTTGAGTTCAAC
AGCTTCTGGCACGCGTACAACAACTACTGGTACAACAACACTGGCCATGC
CTTCGATGTTGGCAAGAACACCCGTGCTCTGATCGAGGGTAATGTGATGG
TCCAGGTCGACACTCCTCTCTTGGCCGACAGCAACCCCGGTGCCGTATTC
GCCGTGAACACCAGCGATGTTTCCACCTGCACCAGCACCCTCGGACGCAC
CTGTGTCCCCAACACTTTGATCAGCTCCGGTACTCTCTCCGGTAGTGACA
GCTCTGTGATCAGCAGCTGGCCCTCTGGTGAGTCCGACGTCACCGTCATG
GCTGCTAGCAAAGTTGCTTCCTACGTCAAGGCCAACGCCGGTATTGGTAA
GCTCGGCAACGGATCTGGCTCCTCCAGCACCGTCGGCGCGGCCGCCACCT
CCGCTGTCGCCAAGCGTGCCGACTCTGACGATGCTCCTTTTGTCCCGGCC
TACTCTGAGGCTGGCCCCGGCGCTTCCGCTGTCCCCACCCAGCCCTCCTG
GTCTTGGAGGACAGTCACCAACGGCCCTGCTCCCACTGGAGCTCCCTCTG
ATAGCCCCTCGGCCCCCAGGGTCTTGGTGCTCCTGTCCAGGCTTCGAACA
AGCACCACCACCAGGGACACGGCCGTGGCTACTAAAGGGAATTTGTGGGT
TCGCTTCTGCGCTGCCAAGCTGACAATGAAGCAAGCTGAGATAATTCCCA
TTTTCAACGGTCTGTGAGTCACAGCGTTACCATCTCGAACAGCGAGTTTG
ATGGTGAGACCAGCTGGTCTGCGACTTGCGACGGCCACCACTACTGGACT
GTATGACCCTCCTTCGTCATCTCTTAACGGCAACTGCCTTGCTCGGAGCT
TCAGTCCAAGCAGCGCAGGGTGTCACTGGCTCCCCCTTCGGTTTCGCTAG
CGGCACGACCGGTGGCGGTGATGCCACTCCCGCTGCGCCCAGCGACATCA
GCCAGCTGAAGACCTGGTTGTCTGACAGCACCCCCCGTGTCATCCTTATC
GACAAGGAGTTCAACTTCCTTGGCAGCGAGGGCAAGTGCACCAACTGCGA
GTGCTGCAAACCCGCCTCGAACACCTGCGGTAGCTCTGGCCAGAATGCCG
TCAAGCAGAATGGCTCCGACTGGTGCGGTAGCTATCCCACCCTGACCTGC
ACGTACGACAACGCCGGTATTGAGGGCCTGGAAGTCGCCTCCAACAAGTC
TATTGTTGGCGTGGGTAGCTCTGGTGTCCTGCGTGGAAAGGGTCTGCGCC
TGGTGAACGGTGTCAGCAACATCATTATCCAGAACATCCACATCACGGAG
CTCAACCCCGAGTTCATCTGGGGTGGTGACGCTATCACCCTCGACGGCAC
CAACAACGTCTGGATTGACCACGTCAAGATCAACCTCATTGGTCGTCAGA
TGTTCGTTGCCGGATACGAAGCCATCTCGGATACGGCCACAATGACAAGA
TCACCTTCGCCAACAACTACATCCACCACACTTCGGGCCGTTCCCCCAAG
CTTGAGTTCAACAGCTTCTGGCACGCGTACAACAACTACTGGTACAACAA
CACTGGCCATGCCTTCGATGTTGGCAAGAACACCCGTGCTCTGATCGAGG
GTAATGTGATGGTCCAGGTCGACACTCCTCTCTTGGCCGACAGCAACCCC
GGTGCCGTATTCGCCGTGAACACCAGCGATGTTTCCACCTGCACCAGCAC
CCTCGGACGCACCTGTGTCCCCAACACTTTGATCAGCTCCGGTACTCTCT
CCGGTAGTGACAGCTCTGTGATCAGCAGCTGGCCCTCTGGTGAGTCCGAC
GTCACCGTCATGGCTGCTAGCAAAGTTGCTTCCTACGTCAAGGCCAACGC
CGGTATTGGTAAGCTCGGCAACGGATCTGGCTCCTCCAGCACCGTCGGCG
CGGCCGCCACCTCCGCTGTCGCCAAGCGTGCCGACTCTGACGATGCTCCT
TTTGTCCCGGCCTACTCTGAGGCTGGCCCCGGCGCTTCCGCTGTCCCCAC
CCAGCCCTCCTGGTCTTGGAGGACAGTCACCAACGGCCCTGCTCCCACTG
GAGCTCCCTCTGATAGCCCCTCGGCCCCCAGGGTCTTGGTGCTCCTGTCC
AGGCTTCGAACAAGCACCACCACCAGGGACACGGCCGTGGCTACTAAAGG
GAATTTGTGGGTTCGCTTCTGCGCTGCCAAGCTGACAATGAAGCAAGCTG
AGATAATTCCCATTTTCAACGGTCTGTGAGTCACAGCGTTACCATCTCGA
ACAGCGAGTTTGATGGTGAGACCAGCTGGTCTGCGACTTGCGACGGCCAC
CACTACTGGACTGTATGACCCTCCTTCGTCATCTCTTAACGGCAACTGCC
TTGCTCGGAGCTTCAGTCCAAGCAGCGCAGGGTGTCACTGGCTCCCCCTT
CGGTTTCGCTAGCGGCACGACCGGTGGCGGTGATGCCACTCCCGCTGCGC
CCAGCGACATCAGCCAGCTGAAGACCTGGTTGTCTGACAGCACCCCCCGT
GTCATCCTTATCGACAAGGAGTTCAACTTCCTTGGCAGCGAGGGCAAGTG
CACCAACTGCGAGTGCTGCAAACCCGCCTCGAACACCTGCGGTAGCTCTG
GCCAGAATGCCGTCAAGCAGAATGGCTCCGACTGGTGCGGTAGCTATCCC
ACCCTGACCTGCACGTACGACAACGCCGGTATTGAGGGCCTGGAAGTCGC
CTCCAACAAGTCTATTGTTGGCGTGGGTAGCTCTGGTGTCCTGCGTGGAA
AGGGTCTGCGCCTGGTGAACGGTGTCAGCAACATCATTATCCAGAACATC
CACATCACGGAGCTCAACCCCGAGTTCATCTGGGGTGGTGACGCTATCAC
CCTCGACGGCACCAACAACGTCTGGATTGACCACGTCAAGATCAACCTCA
TTGGTCGTCAGATGTTCGTTGCCGGATACGAAGCCA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
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| Note | SECRETED:SignalP(1-23) |
| Note | CAZy:PL1 |
| Note | CAZy:PL1_4 |
| DBxref | InterPro:IPR011050 |
| DBxref | InterPro:IPR012334 |
| DBxref | InterPro:IPR002022 |
| DBxref | PFAM:PF00544 |
| Product | Pectate lyase family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000003.1 | supercontig | NKJJ01000003.1:1761751..1763376 - |
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