You are here

Home

CAN33_32545-T1, CAN33_32545-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_32545-T1
Unique NameCAN33_32545-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000003.1:1765443..1766507+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_32545-T1 ID=CAN33_32545-T1|Name=CAN33_32545-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1065bp|location=Sequence derived from alignment at NKJJ01000003.1:1765443..1766507+ (Aspergillus niger FDAARGOS_311)
ATGCCATCGTTTGATCCCACAAATGTAAACTTAGACACTGCCAGTGTGGA
GGACATATACTGTTACCTGCAGTTGTCTGGAAATGATTACAATGGACACC
TGGGTGCACGCATCTCTGCGATATTTGTGATCCTGATAACATCATCAGCA
TGTACGCTTTTTCCAGTGGTAGCCAAGCGAATACCACGCTGGAATATCCC
ATACCCTGTCTATCTCTTCGCTCGATACTTCGGTACGGGTGTTATTGTCG
CAACCGCATTCATCCACCTATTGGACCCAGCGTATGGAAGCATCGGCAGC
ACAACCTGCGTGGGCGTATCGGAGCATTGGGCAGATTATTCCTGGTGTCC
TGCCATTGTTCTCGTGTCTGTGCTCATGGTGTTCCTGATAGACGTGGCTT
CCGAAGTATACGTCGAGCGCGTATATGGGGTGGAAAGAGAGTACGACGCG
ACCGACCGGTTTCTGGCCCAAGCAAACTTAATCCAGAGCGACGACGAGAG
TACAGTCAATGATGATGCTGGTGGAATTAAGCAGCCTGGGATTCAAGATG
ACATTTGCTCAGTCGAATCCGAGCGCTCATTTCGCAAAGATATCGCTGCC
TTTCTTATTCTGGAGTTCGGCATTATCTTCCATTCGGTAATCATCGGGCT
TAACCTGGGAGTGACTGGCGACGAGTTCACCACTCTGTACCCCGTGTTGG
TCTTCCATCAAGCGTTTGAAGGCCTTGGAATCGGCGCCCGAATGTCTGCG
CTTCGCTTTGGCCGACATTGGTGGCTGCCGTGGGTTCTCTGCATGGCATA
CGGCCTCACTACGCCAATTTCGATTGCTATCGGCATAGGGGTACGCACAA
CGTATAACTCGGGATCCAGGACAGCAAACATTGTCCAGGGCGTATTGGAT
GCTGTCTCAGCCGGCATTTTGATCTACAGTGGATTAGTGGAATTGCTGGC
TCGCGACTTTCTGTTCGACCCAGACCGGGCTAAGCGGCGGTCGCATCTGC
TGGGAATGATCTTCTGCGTATTGCTGGGAGCCGGCATCATGGCACTTATT
GGGAAGTGGGCATGA
back to top

Coding sequence (CDS) from alignment at NKJJ01000003.1:1765443..1766507+

>CAN33_32545-T1 ID=CAN33_32545-T1|Name=CAN33_32545-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1065bp|location=Sequence derived from alignment at NKJJ01000003.1:1765443..1766507+ (Aspergillus niger FDAARGOS_311)
ATGCCATCGTTTGATCCCACAAATGTAAACTTAGACACTGCCAGTGTGGA
GGACATATACTGTTACCTGCAGTTGTCTGGAAATGATTACAATGGACACC
TGGGTGCACGCATCTCTGCGATATTTGTGATCCTGATAACATCATCAGCA
TGTACGCTTTTTCCAGTGGTAGCCAAGCGAATACCACGCTGGAATATCCC
ATACCCTGTCTATCTCTTCGCTCGATACTTCGGTACGGGTGTTATTGTCG
CAACCGCATTCATCCACCTATTGGACCCAGCGTATGGAAGCATCGGCAGC
ACAACCTGCGTGGGCGTATCGGAGCATTGGGCAGATTATTCCTGGTGTCC
TGCCATTGTTCTCGTGTCTGTGCTCATGGTGTTCCTGATAGACGTGGCTT
CCGAAGTATACGTCGAGCGCGTATATGGGGTGGAAAGAGAGTACGACGCG
ACCGACCGGTTTCTGGCCCAAGCAAACTTAATCCAGAGCGACGACGAGAG
TACAGTCAATGATGATGCTGGTGGAATTAAGCAGCCTGGGATTCAAGATG
ACATTTGCTCAGTCGAATCCGAGCGCTCATTTCGCAAAGATATCGCTGCC
TTTCTTATTCTGGAGTTCGGCATTATCTTCCATTCGGTAATCATCGGGCT
TAACCTGGGAGTGACTGGCGACGAGTTCACCACTCTGTACCCCGTGTTGG
TCTTCCATCAAGCGTTTGAAGGCCTTGGAATCGGCGCCCGAATGTCTGCG
CTTCGCTTTGGCCGACATTGGTGGCTGCCGTGGGTTCTCTGCATGGCATA
CGGCCTCACTACGCCAATTTCGATTGCTATCGGCATAGGGGTACGCACAA
CGTATAACTCGGGATCCAGGACAGCAAACATTGTCCAGGGCGTATTGGAT
GCTGTCTCAGCCGGCATTTTGATCTACAGTGGATTAGTGGAATTGCTGGC
TCGCGACTTTCTGTTCGACCCAGACCGGGCTAAGCGGCGGTCGCATCTGC
TGGGAATGATCTTCTGCGTATTGCTGGGAGCCGGCATCATGGCACTTATT
GGGAAGTGGGCATGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0005385zinc ion transmembrane transporter activity
GO:0046873metal ion transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0071577zinc ion transmembrane transport
GO:0055085transmembrane transport
GO:0030001metal ion transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_32545CAN33_32545Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_32545-T1.exon1CAN33_32545-T1.exon1Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_32545-T1.cdsCAN33_32545-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_32545-T1CAN33_32545-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR004698
DBxrefInterPro:IPR003689
DBxrefPFAM:PF02535
ProductZIP zinc/iron transport family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000003.1supercontigNKJJ01000003.1:1765443..1766507 +
Powered by Drupal