|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000003.1:1798887..1800758- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_32610-T1 ID=CAN33_32610-T1|Name=CAN33_32610-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1872bp|location=Sequence derived from alignment at NKJJ01000003.1:1798887..1800758- (Aspergillus niger FDAARGOS_311)
ATGTTGCTGCCTATCAAACTGGAGAAACCCTCAGTTGGAAGGATGACGCT
GCTGCCTCGTATCTCAGGCGCCAGCCACGTGGGCTCCACGCTTAAGCCCC
GTAATCTCGTGCTTATCGCGTCTCACGCAGCACACACGCAACTAATCTAA
TTTCTTTTGTCTCCAGGCTAATCATTTTCAATTCTACTGGCAGCTCGACC
TATGCTCCTCGACACTCCGGGATCATCCGAAATCACAACACCCCCAGCAT
CCACCCGCAAGAGAGCTGGGGGAAGAAGGTCCAAGACTGGATGTCGTACC
TGTCGGTGAGTTCAGCCTGCACGACACTACCATAGATACTCTGCTAACAA
ACCCGCGCTCTTTAGTGCCCGCCATAAGAAATGCGATGAAACCCCAGGCG
CCTGCATCAATTGTACATCTACGGGTCGAACCTGCGATGGATATGAGCTC
CACCGCTTACCCCGCGAGGTGAGGAGACCCGGAAAAGCAGTGGTGGGGAT
AACAGTGCCCGCCTCACTCGCGAATGGGATCCACTGGGTGATGAATTCCG
ACGAGCAACGAGCGTTCGCCTATTTCCAGCATCGATCCATGCCCGCGTTT
TTAGGATGGTTTGACTCGTCGCTATGGCAGAAACTGGTCCTCCAGTTGAG
TCATGCAGAGCCCGCTGTATACCACGCAGCTATCGCATTGAGCGCCATCC
ACCAGGATGCCGAGAAGAAAGGCATGCCGCTTGCTAGGGAGGACTTGGAC
AATACTTGGCATCGCTTCGCTTTGGAACAGGCGGGACGCTCCATCGTCTT
GCTCAATGCGCGACGGACATCGCAGGATCCCCGTCTGAGAGAGGTCACTC
TGCTGTGCTGCTTGCTTTTCACGTTGTCTGAATTGCTGCGCGGTCGGTAC
GATAACGCTTTTAGACATCTGCATGGTGGTATACACATCTTGAAAAATCT
AGGCGCCCATAGACAGCTTGATTCGGTGGCAATGTCTAAGCCTCCGGTCG
AGTGGTGTCTTGTCGAGGCATTTGCGCACTTGGACGTCCAGTCTACCCAG
TTCGGCGTAGGAGGACCGATCTGGTTTACCGGTAAGCAGGACCATATCCA
GCTAGGGAATGGGAAGTCCTCCGTTTTTCATTTTCATACTCTTGCAGAGG
CGCGTCGAGCTTTCGATCGCGTGATGGGCACTGTTCTTGAGTTCACAGCA
AAGGCATGGGGCTCAACCCACAGTCAGATCGCATCGGACTACGAAACACT
ATACAAGGAGCAGCTCGAACTCTGTCTACAGATAGACACATTTGCACGAG
CATTCGATACATTTCGAACCGACGCATACCCTCAGATGAGCCCGAAAGAG
CGACGAGGAGCCGACGTTGTCCACCTTCACCAGCGAGCCGCAACCCTCAC
CCTCCAAACCTGCCTTTTAGACGGAAACGAGCCGGTACTTGATCAGTACA
CGCCCGAATTCGAAAATATCCTATCTTTAGCGGCTGCAATCATGCACACA
TTCCCAGAGCGCCCGAGTGTTTGCTTTGACATGGGCATCATTCCACCTCT
GACTCTCGTGGCGACAGGCTGCCGTGATTACAATGTTCGGTGGCGCGCAA
TTGAGATGCTTTGTTCTTGGCCTCATCGCGAGGGGACCTGGGATTCCAAC
TTGTGTGCGCAGCTGGCGGTTCATACTATGAAAGTGGAGGCATTGAATAA
ATTCAATGTGGATGCGAGTGGAACACCGGCCGATGTTCACAATGAGCCAT
CCTTGCGAGGTATATTCATGACAGTCGAAGAGGATCAGCGCCAGGCGCGT
ATTTCGTACTTTCTTGGAGATGTAAAGCACGAACTCCGGGTTATGCTGGA
GGAGGATATACATCCCTTTTAG back to topCoding sequence (CDS) from alignment at NKJJ01000003.1:1798887..1800758- >CAN33_32610-T1 ID=CAN33_32610-T1|Name=CAN33_32610-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=5157bp|location=Sequence derived from alignment at NKJJ01000003.1:1798887..1800758- (Aspergillus niger FDAARGOS_311)
TGCCCGCCATAAGAAATGCGATGAAACCCCAGGCGCCTGCATCAATTGTA
CATCTACGGGTCGAACCTGCGATGGATATGAGCTCCACCGCTTACCCCGC
GAGGTGAGGAGACCCGGAAAAGCAGTGGTGGGGATAACAGTGCCCGCCTC
ACTCGCGAATGGGATCCACTGGGTGATGAATTCCGACGAGCAACGAGCGT
TCGCCTATTTCCAGCATCGATCCATGCCCGCGTTTTTAGGATGGTTTGAC
TCGTCGCTATGGCAGAAACTGGTCCTCCAGTTGAGTCATGCAGAGCCCGC
TGTATACCACGCAGCTATCGCATTGAGCGCCATCCACCAGGATGCCGAGA
AGAAAGGCATGCCGCTTGCTAGGGAGGACTTGGACAATACTTGGCATCGC
TTCGCTTTGGAACAGGCGGGACGCTCCATCGTCTTGCTCAATGCGCGACG
GACATCGCAGGATCCCCGTCTGAGAGAGGTCACTCTGCTGTGCTGCTTGC
TTTTCACGTTGTCTGAATTGCTGCGCGGTCGGTACGATAACGCTTTTAGA
CATCTGCATGGTGGTATACACATCTTGAAAAATCTAGGCGCCCATAGACA
GCTTGATTCGGTGGCAATGTCTAAGCCTCCGGTCGAGTGGTGTCTTGTCG
AGGCATTTGCGCACTTGGACGTCCAGTCTACCCAGTTCGGCGTAGGAGGA
CCGATCTGGTTTACCGGTAAGCAGGACCATATCCAGCTAGGGAATGGGAA
GTCCTCCGTTTTTCATTTTCATACTCTTGCAGAGGCGCGTCGAGCTTTCG
ATCGCGTGATGGGCACTGTTCTTGAGTTCACAGCAAAGGCATGGGGCTCA
ACCCACAGTCAGATCGCATCGGACTACGAAACACTATACAAGGAGCAGCT
CGAACTCTGTCTACAGATAGACACATTTGCACGAGCATTCGATACATTTC
GAACCGACGCATACCCTCAGATGAGCCCGAAAGAGCGACGAGGAGCCGAC
GTTGTCCACCTTCACCAGCGAGCCGCAACCCTCACCCTCCAAACCTGCCT
TTTAGACGGAAACGAGCCGGTACTTGATCAGTACACGCCCGAATTCGAAA
ATATCCTATCTTTAGCGGCTGCAATCATGCACACATTCCCAGAGCGCCCG
AGTGTTTGCTTTGACATGGGCATCATTCCACCTCTGACTCTCGTGGCGAC
AGGCTGCCGTGATTACAATGTTCGGTGGCGCGCAATTGAGATGCTTTGTT
CTTGGCCTCATCGCGAGGGGACCTGGGATTCCAACTTGTGTGCGCAGCTG
GCGGTTCATACTATGAAAGTGGAGGCATTGAATAAATTCAATGTGGATGC
GAGTGGAACACCGGCCGATGTTCACAATGAGCCATCCTTGCGAGGTATAT
TCATGACAGTCGAAGAGGATCAGCGCCAGGCGCGTATTTCGTACTTTCTT
GGAGATGTAAAGCACGAACTCCGGGTTATGCTGGAGGAGGATATACATCC
CTTTTAGCTCGACCTATGCTCCTCGACACTCCGGGATCATCCGAAATCAC
AACACCCCCAGCATCCACCCGCAAGAGAGCTGGGGGAAGAAGGTCCAAGA
CTGGATGTCGTACCTGTCGATGTTGCTGCCTATCAAACTGGAGAAACCCT
CAGTTGGAAGGATGACGCTGCTGCCTCGTATCTCAGGCGCCAGCCACGTG
GGCTCCACGCTTAAGCCCCTGCCCGCCATAAGAAATGCGATGAAACCCCA
GGCGCCTGCATCAATTGTACATCTACGGGTCGAACCTGCGATGGATATGA
GCTCCACCGCTTACCCCGCGAGGTGAGGAGACCCGGAAAAGCAGTGGTGG
GGATAACAGTGCCCGCCTCACTCGCGAATGGGATCCACTGGGTGATGAAT
TCCGACGAGCAACGAGCGTTCGCCTATTTCCAGCATCGATCCATGCCCGC
GTTTTTAGGATGGTTTGACTCGTCGCTATGGCAGAAACTGGTCCTCCAGT
TGAGTCATGCAGAGCCCGCTGTATACCACGCAGCTATCGCATTGAGCGCC
ATCCACCAGGATGCCGAGAAGAAAGGCATGCCGCTTGCTAGGGAGGACTT
GGACAATACTTGGCATCGCTTCGCTTTGGAACAGGCGGGACGCTCCATCG
TCTTGCTCAATGCGCGACGGACATCGCAGGATCCCCGTCTGAGAGAGGTC
ACTCTGCTGTGCTGCTTGCTTTTCACGTTGTCTGAATTGCTGCGCGGTCG
GTACGATAACGCTTTTAGACATCTGCATGGTGGTATACACATCTTGAAAA
ATCTAGGCGCCCATAGACAGCTTGATTCGGTGGCAATGTCTAAGCCTCCG
GTCGAGTGGTGTCTTGTCGAGGCATTTGCGCACTTGGACGTCCAGTCTAC
CCAGTTCGGCGTAGGAGGACCGATCTGGTTTACCGGTAAGCAGGACCATA
TCCAGCTAGGGAATGGGAAGTCCTCCGTTTTTCATTTTCATACTCTTGCA
GAGGCGCGTCGAGCTTTCGATCGCGTGATGGGCACTGTTCTTGAGTTCAC
AGCAAAGGCATGGGGCTCAACCCACAGTCAGATCGCATCGGACTACGAAA
CACTATACAAGGAGCAGCTCGAACTCTGTCTACAGATAGACACATTTGCA
CGAGCATTCGATACATTTCGAACCGACGCATACCCTCAGATGAGCCCGAA
AGAGCGACGAGGAGCCGACGTTGTCCACCTTCACCAGCGAGCCGCAACCC
TCACCCTCCAAACCTGCCTTTTAGACGGAAACGAGCCGGTACTTGATCAG
TACACGCCCGAATTCGAAAATATCCTATCTTTAGCGGCTGCAATCATGCA
CACATTCCCAGAGCGCCCGAGTGTTTGCTTTGACATGGGCATCATTCCAC
CTCTGACTCTCGTGGCGACAGGCTGCCGTGATTACAATGTTCGGTGGCGC
GCAATTGAGATGCTTTGTTCTTGGCCTCATCGCGAGGGGACCTGGGATTC
CAACTTGTGTGCGCAGCTGGCGGTTCATACTATGAAAGTGGAGGCATTGA
ATAAATTCAATGTGGATGCGAGTGGAACACCGGCCGATGTTCACAATGAG
CCATCCTTGCGAGGTATATTCATGACAGTCGAAGAGGATCAGCGCCAGGC
GCGTATTTCGTACTTTCTTGGAGATGTAAAGCACGAACTCCGGGTTATGC
TGGAGGAGGATATACATCCCTTTTAGCTCGACCTATGCTCCTCGACACTC
CGGGATCATCCGAAATCACAACACCCCCAGCATCCACCCGCAAGAGAGCT
GGGGGAAGAAGGTCCAAGACTGGATGTCGTACCTGTCGATGTTGCTGCCT
ATCAAACTGGAGAAACCCTCAGTTGGAAGGATGACGCTGCTGCCTCGTAT
CTCAGGCGCCAGCCACGTGGGCTCCACGCTTAAGCCCCTGCCCGCCATAA
GAAATGCGATGAAACCCCAGGCGCCTGCATCAATTGTACATCTACGGGTC
GAACCTGCGATGGATATGAGCTCCACCGCTTACCCCGCGAGGTGAGGAGA
CCCGGAAAAGCAGTGGTGGGGATAACAGTGCCCGCCTCACTCGCGAATGG
GATCCACTGGGTGATGAATTCCGACGAGCAACGAGCGTTCGCCTATTTCC
AGCATCGATCCATGCCCGCGTTTTTAGGATGGTTTGACTCGTCGCTATGG
CAGAAACTGGTCCTCCAGTTGAGTCATGCAGAGCCCGCTGTATACCACGC
AGCTATCGCATTGAGCGCCATCCACCAGGATGCCGAGAAGAAAGGCATGC
CGCTTGCTAGGGAGGACTTGGACAATACTTGGCATCGCTTCGCTTTGGAA
CAGGCGGGACGCTCCATCGTCTTGCTCAATGCGCGACGGACATCGCAGGA
TCCCCGTCTGAGAGAGGTCACTCTGCTGTGCTGCTTGCTTTTCACGTTGT
CTGAATTGCTGCGCGGTCGGTACGATAACGCTTTTAGACATCTGCATGGT
GGTATACACATCTTGAAAAATCTAGGCGCCCATAGACAGCTTGATTCGGT
GGCAATGTCTAAGCCTCCGGTCGAGTGGTGTCTTGTCGAGGCATTTGCGC
ACTTGGACGTCCAGTCTACCCAGTTCGGCGTAGGAGGACCGATCTGGTTT
ACCGGTAAGCAGGACCATATCCAGCTAGGGAATGGGAAGTCCTCCGTTTT
TCATTTTCATACTCTTGCAGAGGCGCGTCGAGCTTTCGATCGCGTGATGG
GCACTGTTCTTGAGTTCACAGCAAAGGCATGGGGCTCAACCCACAGTCAG
ATCGCATCGGACTACGAAACACTATACAAGGAGCAGCTCGAACTCTGTCT
ACAGATAGACACATTTGCACGAGCATTCGATACATTTCGAACCGACGCAT
ACCCTCAGATGAGCCCGAAAGAGCGACGAGGAGCCGACGTTGTCCACCTT
CACCAGCGAGCCGCAACCCTCACCCTCCAAACCTGCCTTTTAGACGGAAA
CGAGCCGGTACTTGATCAGTACACGCCCGAATTCGAAAATATCCTATCTT
TAGCGGCTGCAATCATGCACACATTCCCAGAGCGCCCGAGTGTTTGCTTT
GACATGGGCATCATTCCACCTCTGACTCTCGTGGCGACAGGCTGCCGTGA
TTACAATGTTCGGTGGCGCGCAATTGAGATGCTTTGTTCTTGGCCTCATC
GCGAGGGGACCTGGGATTCCAACTTGTGTGCGCAGCTGGCGGTTCATACT
ATGAAAGTGGAGGCATTGAATAAATTCAATGTGGATGCGAGTGGAACACC
GGCCGATGTTCACAATGAGCCATCCTTGCGAGGTATATTCATGACAGTCG
AAGAGGATCAGCGCCAGGCGCGTATTTCGTACTTTCTTGGAGATGTAAAG
CACGAACTCCGGGTTATGCTGGAGGAGGATATACATCCCTTTTAGCTCGA
CCTATGCTCCTCGACACTCCGGGATCATCCGAAATCACAACACCCCCAGC
ATCCACCCGCAAGAGAGCTGGGGGAAGAAGGTCCAAGACTGGATGTCGTA
CCTGTCGATGTTGCTGCCTATCAAACTGGAGAAACCCTCAGTTGGAAGGA
TGACGCTGCTGCCTCGTATCTCAGGCGCCAGCCACGTGGGCTCCACGCTT
AAGCCCC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
| GO:0008270 | zinc ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR021858 |
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR001138 |
| DBxref | PFAM:PF00172 |
| DBxref | PFAM:PF11951 |
| Product | Fungal specific transcription factor domain family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000003.1 | supercontig | NKJJ01000003.1:1798887..1800758 - |
|
