You are here

Home

CAN33_32800-T1, CAN33_32800-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_32800-T1
Unique NameCAN33_32800-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000003.1:1925977..1926892+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_32800-T1 ID=CAN33_32800-T1|Name=CAN33_32800-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=916bp|location=Sequence derived from alignment at NKJJ01000003.1:1925977..1926892+ (Aspergillus niger FDAARGOS_311)
ATGTGGCTCAACTATCTGCTGCTGATCGCCCTTCTGGAACGGCTGGTGGC
CGGCACCACCTGCTACTTCCCTGAGGGCAACGTGGCCGAGGATTACACGC
CTTGCTCGGACAATGGTGTCTCGTTCTGCTGCAACAAGGACTCAATTTGC
CTCAGCAATGGCCTCTGCACCTCCATGCATCAACCGTATGTTCTCGGCCG
CGGCGCCTGTACCTCCCAAAGTTGGAACGATACCTCGGTCTGCGACGATG
TCTGTCACGGAAGTACGTGGGATACCTCGCTCCCCTTAGTTATAGTTTGG
CTTCAACTTCTTCTACTGTTCTTCTTCAATGCGACTGACCAAATGTCGCA
AAATAACAGTCACCACCGCGTGGAGCAGCGCCTGCTCCCTAATCCTCTAC
GGCACCGTGAACGGAGTCAAGTTGTACTGCCCCAACTCAATTATTTCCAA
CGGAACCGACTCCCTCGGATGCGCCAATGGTGTCTCACCCATTTCAGTGG
GCACTGGCAAGCCCATTGCCGGCAAAGCCTATCTGGCCAGCTACTCCCTC
CTCCCTACTGCTAGCACCGCCACCAGCACGGCGACCGCCACTTCCACCAC
CGAACTCGATACTTCCTCCCCCTCCACCTCCACCACAGCCGATGAAAGCT
GCAGCAGCTCGACCGCGGCTAATAGCAACCAAGTCAGCCGGGCGACCGTG
ACTGCCGTTGGGGCCGGGGTCGGCGTCCCGCTTGGGCTGCTGGCGTTGGC
ATCGCTGGGCTATGGCTTTAATGAGAGAAGAAAGCGACTGCAACTCCAGA
ATGCTTCACCAAACATGTACCAGATGCCGGCGGCGTCATCAACCTCCTAC
CGATCGAGAAATGTGGGCGCGAAGGAGCTGTCGGGTCATATACCGCTCCA
TGAGCTGGACACGTGA
back to top

Coding sequence (CDS) from alignment at NKJJ01000003.1:1925977..1926892+

>CAN33_32800-T1 ID=CAN33_32800-T1|Name=CAN33_32800-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1845bp|location=Sequence derived from alignment at NKJJ01000003.1:1925977..1926892+ (Aspergillus niger FDAARGOS_311)
ATGTGGCTCAACTATCTGCTGCTGATCGCCCTTCTGGAACGGCTGGTGGC
CGGCACCACCTGCTACTTCCCTGAGGGCAACGTGGCCGAGGATTACACGC
CTTGCTCGGACAATGGTGTCTCGTTCTGCTGCAACAAGGACTCAATTTGC
CTCAGCAATGGCCTCTGCACCTCCATGCATCAACCGTATGTTCTCGGCCG
CGGCGCCTGTACCTCCCAAAGTTGGAACGATACCTCGGTCTGCGACGATG
TCTGTCACGGAATCACCACCGCGTGGAGCAGCGCCTGCTCCCTAATCCTC
TACGGCACCGTGAACGGAGTCAAGTTGTACTGCCCCAACTCAATTATTTC
CAACGGAACCGACTCCCTCGGATGCGCCAATGTCAGCCGGGCGACCGTGA
CTGCCGTTGGGGCCGGGGTCGGCGTCCCGCTTGGGCTGCTGGCGTTGGCA
TCGCTGGGCTATGGCTTTAATGAGAGAAGAAAGCGACTGCAACTCCAGAA
TGCTTCACCAAACATGTACCAGATGCCGGCGGCGTCATCAACCTCCTACC
GATCGAGAAATGTGGGCGCGAAGGAGCTGTCGGGTCATATACCGCTCCAT
GAGCTGGACACGTGAATGTGGCTCAACTATCTGCTGCTGATCGCCCTTCT
GGAACGGCTGGTGGCCGGCACCACCTGCTACTTCCCTGAGGGCAACGTGG
CCGAGGATTACACGCCTTGCTCGGACAATGGTGTCTCGTTCTGCTGCAAC
AAGGACTCAATTTGCCTCAGCAATGGCCTCTGCACCTCCATGCATCAACC
GTATGTTCTCGGCCGCGGCGCCTGTACCTCCCAAAGTTGGAACGATACCT
CGGTCTGCGACGATGTCTGTCACGGAATCACCACCGCGTGGAGCAGCGCC
TGCTCCCTAATCCTCTACGGCACCGTGAACGGAGTCAAGTTGTACTGCCC
CAACTCAATTATTTCCAACGGAACCGACTCCCTCGGATGCGCCAATGTCA
GCCGGGCGACCGTGACTGCCGTTGGGGCCGGGGTCGGCGTCCCGCTTGGG
CTGCTGGCGTTGGCATCGCTGGGCTATGGCTTTAATGAGAGAAGAAAGCG
ACTGCAACTCCAGAATGCTTCACCAAACATGTACCAGATGCCGGCGGCGT
CATCAACCTCCTACCGATCGAGAAATGTGGGCGCGAAGGAGCTGTCGGGT
CATATACCGCTCCATGAGCTGGACACGTGAATGTGGCTCAACTATCTGCT
GCTGATCGCCCTTCTGGAACGGCTGGTGGCCGGCACCACCTGCTACTTCC
CTGAGGGCAACGTGGCCGAGGATTACACGCCTTGCTCGGACAATGGTGTC
TCGTTCTGCTGCAACAAGGACTCAATTTGCCTCAGCAATGGCCTCTGCAC
CTCCATGCATCAACCGTATGTTCTCGGCCGCGGCGCCTGTACCTCCCAAA
GTTGGAACGATACCTCGGTCTGCGACGATGTCTGTCACGGAATCACCACC
GCGTGGAGCAGCGCCTGCTCCCTAATCCTCTACGGCACCGTGAACGGAGT
CAAGTTGTACTGCCCCAACTCAATTATTTCCAACGGAACCGACTCCCTCG
GATGCGCCAATGTCAGCCGGGCGACCGTGACTGCCGTTGGGGCCGGGGTC
GGCGTCCCGCTTGGGCTGCTGGCGTTGGCATCGCTGGGCTATGGCTTTAA
TGAGAGAAGAAAGCGACTGCAACTCCAGAATGCTTCACCAAACATGTACC
AGATGCCGGCGGCGTCATCAACCTCCTACCGATCGAGAAATGTGGGCGCG
AAGGAGCTGTCGGGTCATATACCGCTCCATGAGCTGGACACGTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_32800CAN33_32800Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_32800-T1.exon1CAN33_32800-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_32800-T1.exon2CAN33_32800-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_32800-T1.exon3CAN33_32800-T1.exon3Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_32800-T1.cdsCAN33_32800-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_32800-T1CAN33_32800-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
NoteSECRETED:SignalP(1-18)
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000003.1supercontigNKJJ01000003.1:1925977..1926892 +
Powered by Drupal