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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000007.1:78551..79623+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_33025-T1 ID=CAN33_33025-T1|Name=CAN33_33025-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1073bp|location=Sequence derived from alignment at NKJJ01000007.1:78551..79623+ (Aspergillus niger FDAARGOS_311)
ATGCAATCTCACGGGAATTGGAAGACCCTTGAGGGAATAGCTACCAGTCT
GCTTGATGGCAGTCCCATTGCCATTGCGGTCACAGTTTTCATTGCATTCG
GGCTACCTATTCTGCTGCACTTGATCTTCTACCGGACCGTCGCTTCTCCA
CCCTCCAGCAATTTCCTACTCCTTGGTCCCAGTGGGGCTGGCAAGACCGC
TCTCTTAAGCCTGGTATGTTCAATCTGACATGGCCTCAATGCACATCACA
CAATCTTATCTAGCCTTGCTCTGTGCATTCCCCCAAAGTGTAGCCTGTGC
TAACAATCACTTTCCGTCTACAATAGCTCGAGACTAAATCGTCACGTGTT
CCTCCCAAAGAGTCTCGGCTCACACATACTTCGCAAACGTCAACTGTAGC
TACCATCAGCCTTCCCGCCTCCATCCAGACTGCTTCGAACCGCTACCGCT
CTGTCAATGACACCTCCCTGAAGGATATTTCCAAGAACCCCGTCAAGTAC
CGCTTATGGGATACTCCAGGCCATGGAAAACTGCGGGGATCTCAGGGACT
TGCGACATTGCTATCGATGTCAACATCCAAGGATGTAAAGTCCAAGTTGC
GTGGAATCCTATTTATGGTCGACACGGCTGCTCTTGTGGAGGCTGAAACA
TTGCGAGATACAGCTTCGTATCTGTATGATGTGCTTTTAGCCCTCCAGAA
CCGGGCTCTTAAGAAGGGCAAGAATTCCGCGAAAGCAGCCTCGGAGATCC
CCGTTCTCGTGGTGGCCAACAAGCAAGACCTTTTCACAGCCTTACCTCCA
GGTTCCGTGCGTGAAAAGCTGGAGGCGGAGATTGACAGAATAAGGAAGTC
CAAGAGCAAAGGTCTCATGGATGCTAGCGCTGACGCTGGAATTGATGAGG
GCGAAGACGATATTCTGGGAAGTACTGACACTCGGATTAAGTTCACCTTC
AGAGGCCTAGAAGATGAAATTGGGCTGACTGTTGACATTGTCGGCGGCGC
AGTCAAGAGTGATGAGGGCAACCTCGGGGCCGGCGTCAGAAAGTGGGAGG
AATGGATCGGTCAATGCCTCTGA back to topCoding sequence (CDS) from alignment at NKJJ01000007.1:78551..79623+ >CAN33_33025-T1 ID=CAN33_33025-T1|Name=CAN33_33025-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1920bp|location=Sequence derived from alignment at NKJJ01000007.1:78551..79623+ (Aspergillus niger FDAARGOS_311)
ATGCAATCTCACGGGAATTGGAAGACCCTTGAGGGAATAGCTACCAGTCT
GCTTGATGGCAGTCCCATTGCCATTGCGGTCACAGTTTTCATTGCATTCG
GGCTACCTATTCTGCTGCACTTGATCTTCTACCGGACCGTCGCTTCTCCA
CCCTCCAGCAATTTCCTACTCCTTGGTCCCAGTGGGGCTGGCAAGACCGC
TCTCTTAAGCCTGCTCGAGACTAAATCGTCACGTGTTCCTCCCAAAGAGT
CTCGGCTCACACATACTTCGCAAACGTCAACTGTAGCTACCATCAGCCTT
CCCGCCTCCATCCAGACTGCTTCGAACCGCTACCGCTCTGTCAATGACAC
CTCCCTGAAGGATATTTCCAAGAACCCCGTCAAGTACCGCTTATGGGATA
CTCCAGGCCATGGAAAACTGCGGGGATCTCAGGGACTTGCGACATTGCTA
TCGATGTCAACATCCAAGGATGTAAAGTCCAAGTTGCGTGGAATCCTATT
TATGGTCGACACGGCTGCTCTTGTGGAGGCTGAAACATTGCGAGATACAG
CTTCGTATCTGTATGATGTGCTTTTAGCCCTCCAGAACCGGGCTCTTAAG
AAGGGCAAGAATTCCGCGAAAGCAGCCTCGGAGATCCCCGTTCTCGTGGT
GGCCAACAAGCAAGACCTTTTCACAGCCTTACCTCCAGGTTCCGTGCGTG
AAAAGCTGGAGGCGGAGATTGACAGAATAAGGAAGTCCAAGAGCAAAGGT
CTCATGGATGCTAGCGCTGACGCTGGAATTGATGAGGGCGAAGACGATAT
TCTGGGAAGTACTGACACTCGGATTAAGTTCACCTTCAGAGGCCTAGAAG
ATGAAATTGGGCTGACTGTTGACATTGTCGGCGGCGCAGTCAAGAGTGAT
GAGGGCAACCTCGGGGCCGGCGTCAGAAAGTGGGAGGAATGGATCGGTCA
ATGCCTCTGAATGCAATCTCACGGGAATTGGAAGACCCTTGAGGGAATAG
CTACCAGTCTGCTTGATGGCAGTCCCATTGCCATTGCGGTCACAGTTTTC
ATTGCATTCGGGCTACCTATTCTGCTGCACTTGATCTTCTACCGGACCGT
CGCTTCTCCACCCTCCAGCAATTTCCTACTCCTTGGTCCCAGTGGGGCTG
GCAAGACCGCTCTCTTAAGCCTGCTCGAGACTAAATCGTCACGTGTTCCT
CCCAAAGAGTCTCGGCTCACACATACTTCGCAAACGTCAACTGTAGCTAC
CATCAGCCTTCCCGCCTCCATCCAGACTGCTTCGAACCGCTACCGCTCTG
TCAATGACACCTCCCTGAAGGATATTTCCAAGAACCCCGTCAAGTACCGC
TTATGGGATACTCCAGGCCATGGAAAACTGCGGGGATCTCAGGGACTTGC
GACATTGCTATCGATGTCAACATCCAAGGATGTAAAGTCCAAGTTGCGTG
GAATCCTATTTATGGTCGACACGGCTGCTCTTGTGGAGGCTGAAACATTG
CGAGATACAGCTTCGTATCTGTATGATGTGCTTTTAGCCCTCCAGAACCG
GGCTCTTAAGAAGGGCAAGAATTCCGCGAAAGCAGCCTCGGAGATCCCCG
TTCTCGTGGTGGCCAACAAGCAAGACCTTTTCACAGCCTTACCTCCAGGT
TCCGTGCGTGAAAAGCTGGAGGCGGAGATTGACAGAATAAGGAAGTCCAA
GAGCAAAGGTCTCATGGATGCTAGCGCTGACGCTGGAATTGATGAGGGCG
AAGACGATATTCTGGGAAGTACTGACACTCGGATTAAGTTCACCTTCAGA
GGCCTAGAAGATGAAATTGGGCTGACTGTTGACATTGTCGGCGGCGCAGT
CAAGAGTGATGAGGGCAACCTCGGGGCCGGCGTCAGAAAGTGGGAGGAAT
GGATCGGTCAATGCCTCTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR019009 |
| DBxref | PFAM:PF09439 |
| DBxref | PFAM:PF01926 |
| Product | Signal recognition particle receptor beta subunit family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000007.1 | supercontig | NKJJ01000007.1:78551..79623 + |
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