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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000004.1:2126936..2127623- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_3310-T1 ID=CAN33_3310-T1|Name=CAN33_3310-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=688bp|location=Sequence derived from alignment at NKJJ01000004.1:2126936..2127623- (Aspergillus niger FDAARGOS_311)
ATGTCCGGTGAAGCCTGGCTCTATCTGCTGGCGGTGTTGATTAACGCCGT
CAACCTGTTCCTGCAGGTCTTCTTTACTATCATGTACAGCGATCTGGAAT
GGTATGATCTGGCTCTATCCTCCCTCTTGTCTCGCCGATTTCTGTCGTGT
GCGTGGACGAGCTCTTGTGAGCCGCATGGGAGCTCGCCATGGATTGCGAC
AGCGTGATGGAACCCAACCAGCTAACGAACCCGGTTCGCTCCCGCAGTGA
CTACATCAACCCCATTGATCTGTGCAACCGCCTCAACGCCTACATTGTTC
CCGAAGCCGCCGTTCACGCTTTCTTGACCTTCCTGTTCATCATCAATGGC
TACTGGGTCGCCATCGTCCTGAACCTGCCTCTGTTGGCGTTCAATGCTAA
GAAGTAATGCTGTCTTTTCCAGCTCCGCCATGCTGCAGCCCAACTAACAC
AACCGCCCTTTCTGCAGGATCTACGAGAACCAGCACCTCCTGGATGCGAC
CGAGATCTTCCGCAAGCTGAACGTCCACAAGAAGGTTAGACTGCACTGTC
CCAATCCCGCTACCAGGGCGGACCGACCGCTGACGCAAACTGCAGGAATC
TTTCATCAAGCTGGGCTTCCACCTCCTGATGTTCTTCTTCTACCTCTACA
GCATGATCGTCGCCTTGATCCGCGACGAGTCTCACTGA back to topCoding sequence (CDS) from alignment at NKJJ01000004.1:2126936..2127623- >CAN33_3310-T1 ID=CAN33_3310-T1|Name=CAN33_3310-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1668bp|location=Sequence derived from alignment at NKJJ01000004.1:2126936..2127623- (Aspergillus niger FDAARGOS_311)
GAATCTTTCATCAAGCTGGGCTTCCACCTCCTGATGTTCTTCTTCTACCT
CTACAGCATGATCGTCGCCTTGATCCGCGACGAGTCTCACTGAGATCTAC
GAGAACCAGCACCTCCTGGATGCGACCGAGATCTTCCGCAAGCTGAACGT
CCACAAGAAGTGACTACATCAACCCCATTGATCTGTGCAACCGCCTCAAC
GCCTACATTGTTCCCGAAGCCGCCGTTCACGCTTTCTTGACCTTCCTGTT
CATCATCAATGGCTACTGGGTCGCCATCGTCCTGAACCTGCCTCTGTTGG
CGTTCAATGCTAAGAAATGTCCGGTGAAGCCTGGCTCTATCTGCTGGCGG
TGTTGATTAACGCCGTCAACCTGTTCCTGCAGGTCTTCTTTACTATCATG
TACAGCGATCTGGAATGGAATCTTTCATCAAGCTGGGCTTCCACCTCCTG
ATGTTCTTCTTCTACCTCTACAGCATGATCGTCGCCTTGATCCGCGACGA
GTCTCACTGAGATCTACGAGAACCAGCACCTCCTGGATGCGACCGAGATC
TTCCGCAAGCTGAACGTCCACAAGAAGTGACTACATCAACCCCATTGATC
TGTGCAACCGCCTCAACGCCTACATTGTTCCCGAAGCCGCCGTTCACGCT
TTCTTGACCTTCCTGTTCATCATCAATGGCTACTGGGTCGCCATCGTCCT
GAACCTGCCTCTGTTGGCGTTCAATGCTAAGAAATGTCCGGTGAAGCCTG
GCTCTATCTGCTGGCGGTGTTGATTAACGCCGTCAACCTGTTCCTGCAGG
TCTTCTTTACTATCATGTACAGCGATCTGGAATGGAATCTTTCATCAAGC
TGGGCTTCCACCTCCTGATGTTCTTCTTCTACCTCTACAGCATGATCGTC
GCCTTGATCCGCGACGAGTCTCACTGAGATCTACGAGAACCAGCACCTCC
TGGATGCGACCGAGATCTTCCGCAAGCTGAACGTCCACAAGAAGTGACTA
CATCAACCCCATTGATCTGTGCAACCGCCTCAACGCCTACATTGTTCCCG
AAGCCGCCGTTCACGCTTTCTTGACCTTCCTGTTCATCATCAATGGCTAC
TGGGTCGCCATCGTCCTGAACCTGCCTCTGTTGGCGTTCAATGCTAAGAA
ATGTCCGGTGAAGCCTGGCTCTATCTGCTGGCGGTGTTGATTAACGCCGT
CAACCTGTTCCTGCAGGTCTTCTTTACTATCATGTACAGCGATCTGGAAT
GGAATCTTTCATCAAGCTGGGCTTCCACCTCCTGATGTTCTTCTTCTACC
TCTACAGCATGATCGTCGCCTTGATCCGCGACGAGTCTCACTGAGATCTA
CGAGAACCAGCACCTCCTGGATGCGACCGAGATCTTCCGCAAGCTGAACG
TCCACAAGAAGTGACTACATCAACCCCATTGATCTGTGCAACCGCCTCAA
CGCCTACATTGTTCCCGAAGCCGCCGTTCACGCTTTCTTGACCTTCCTGT
TCATCATCAATGGCTACTGGGTCGCCATCGTCCTGAACCTGCCTCTGTTG
GCGTTCAATGCTAAGAAATGTCCGGTGAAGCCTGGCTCTATCTGCTGGCG
GTGTTGATTAACGCCGTCAACCTGTTCCTGCAGGTCTTCTTTACTATCAT
GTACAGCGATCTGGAATG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0016192 | vesicle-mediated transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR033466 |
| DBxref | InterPro:IPR003377 |
| DBxref | PFAM:PF03311 |
| Product | COPII-coated vesicle protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000004.1 | supercontig | NKJJ01000004.1:2126936..2127623 - |
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