|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000007.1:276924..277518+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_33220-T1 ID=CAN33_33220-T1|Name=CAN33_33220-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=595bp|location=Sequence derived from alignment at NKJJ01000007.1:276924..277518+ (Aspergillus niger FDAARGOS_311)
ATGTTGATCAAGTGAGTTGTTGTCCGCCCATGACGCACGCAGATACCCTC
TGTCGCGATAGCAAAGCTAATCGGCGTCAACCTCCAGAGTCCGTACCCTT
ACTGGCAAGGAGATCGAGTTGGACATCGAGCCGGATTACAAGGTACATAC
ACACATCTACACATCCACAGACATATATATGTCTTTGCAATCTCGCCCCA
TCCGCGTGTGGTGATTGTTAGCTGGTCTTACTAGCCGGCTGCAACAACTC
CGCTCGCACACGACCAGCCACCCACCCCACGGACCTATGATACTTTCTTC
CGCGCAGTCGCTAACAAGTACATATGCAGGTGTCCCGGATAAAGGAGCGT
GTTGAAGAGAAAGAGGGTATTCCTCCTGTTCAGCAGCGATTGATTTTCGG
TGGAAAGCAGATGTACGCATACACCCGTTTCCCTATTCCTACACTTGGGG
ATGTATAATCGCTATGCTTTGGGCCAAATACTGATAAAGGGACTTTCATG
AATATAGGGCCGACGACAAGACTGCATCGGAATATAACCTGGAAGGTGGT
GCCACGCTACACCTTGTTCTTGCTCTGCGTGGTGGATGCTTGTGA back to topCoding sequence (CDS) from alignment at NKJJ01000007.1:276924..277518+ >CAN33_33220-T1 ID=CAN33_33220-T1|Name=CAN33_33220-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=948bp|location=Sequence derived from alignment at NKJJ01000007.1:276924..277518+ (Aspergillus niger FDAARGOS_311)
ATGTTGATCAAAGTCCGTACCCTTACTGGCAAGGAGATCGAGTTGGACAT
CGAGCCGGATTACAAGGTGTCCCGGATAAAGGAGCGTGTTGAAGAGAAAG
AGGGTATTCCTCCTGTTCAGCAGCGATTGATTTTCGGTGGAAAGCAGATG
GCCGACGACAAGACTGCATCGGAATATAACCTGGAAGGTGGTGCCACGCT
ACACCTTGTTCTTGCTCTGCGTGGTGGATGCTTGTGAATGTTGATCAAAG
TCCGTACCCTTACTGGCAAGGAGATCGAGTTGGACATCGAGCCGGATTAC
AAGGTGTCCCGGATAAAGGAGCGTGTTGAAGAGAAAGAGGGTATTCCTCC
TGTTCAGCAGCGATTGATTTTCGGTGGAAAGCAGATGGCCGACGACAAGA
CTGCATCGGAATATAACCTGGAAGGTGGTGCCACGCTACACCTTGTTCTT
GCTCTGCGTGGTGGATGCTTGTGAATGTTGATCAAAGTCCGTACCCTTAC
TGGCAAGGAGATCGAGTTGGACATCGAGCCGGATTACAAGGTGTCCCGGA
TAAAGGAGCGTGTTGAAGAGAAAGAGGGTATTCCTCCTGTTCAGCAGCGA
TTGATTTTCGGTGGAAAGCAGATGGCCGACGACAAGACTGCATCGGAATA
TAACCTGGAAGGTGGTGCCACGCTACACCTTGTTCTTGCTCTGCGTGGTG
GATGCTTGTGAATGTTGATCAAAGTCCGTACCCTTACTGGCAAGGAGATC
GAGTTGGACATCGAGCCGGATTACAAGGTGTCCCGGATAAAGGAGCGTGT
TGAAGAGAAAGAGGGTATTCCTCCTGTTCAGCAGCGATTGATTTTCGGTG
GAAAGCAGATGGCCGACGACAAGACTGCATCGGAATATAACCTGGAAGGT
GGTGCCACGCTACACCTTGTTCTTGCTCTGCGTGGTGGATGCTTGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR029071 |
| DBxref | InterPro:IPR038738 |
| DBxref | InterPro:IPR019954 |
| DBxref | InterPro:IPR000626 |
| DBxref | InterPro:IPR019956 |
| DBxref | PFAM:PF00240 |
| DBxref | PFAM:PF11976 |
| Product | nedd8-conjugating enzyme UBE2F |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000007.1 | supercontig | NKJJ01000007.1:276924..277518 + |
|
