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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000007.1:381383..383284+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_33400-T1 ID=CAN33_33400-T1|Name=CAN33_33400-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1902bp|location=Sequence derived from alignment at NKJJ01000007.1:381383..383284+ (Aspergillus niger FDAARGOS_311)
ATGAATCGCCTGGGCAGACTGTCTCTGCCGCTACGGCCTCAAGTTTGTCT
GCTCTGTCAGACGCAGGCGACCATGTCCTCTCCTCTCGCCGGATGGCAGG
CCGTCCGCTCCATGGCAACCGTCCGACAGCGCCGCCAGGCCGCCCGCATG
GTTCTGTCCTCCAATGTCGACAAATCCTCCCTGAAGCAAGGACGTTCGAA
GAGAGATCGTGCCGGCCCCTGGTCCGGCATGAACCAGACGGAGGCGCGCC
TTCGGGATGCGCCACGGTCAAGGTCTCGGGCAGCTCTCAAACGCTCGGGT
GATTCCGAAGATGATAAGCAGAAGCCGGACAGTCCTCTCTACAAGGCGCT
CAAGATGCAGACGGCATTGGCGCCCATTCCTTACGGTCGCCGAACCGCCA
TCAAGAACAAGATCGCAGAAGTTTCGAGTTTCGACCAGTTTCCTCTGCTA
CCGGTCGTGCGCCACTCGATCTCTTCCCAAGCTCTTCCCGGACTGGCGGA
CATTGTACCGACTCCCATTCAACGCCTTGCTATCCCACAACTCCTGAAAG
ACCCTATCCCGAAGAGAACATCTAAAGACGTCTCAGACCATGAACCGAAT
ATTGAACAGTACCTTCTGGCCGCCGAGACCGGGTCGGGAAAGACGCTCGC
CTATCTGATTCCCTTGATCGACTCCCTGAAGCGTATGGAAGTGGAGGACA
AGGAATTCGAGAAGTGGGAGGCAGAACAAAAAGCCAAGGAGCGGGAGGAG
AAGCTCAAAAACCGGGCTTTCGACATTGAACCGGAAGAGGCTCCGTTGTC
GGACGCAGGTAGACCGCGGGTCATTATCCTCGTCCCGACCTCCGAGTTGG
TTGCCCAGGTTGGCGCCAAAGTCAAGGCTCTTTCGCACACGGTCAAGTAC
CGGTCGGGGATGATCTCGTCCAACCTGACCCCTCGTCGGATCAAGAGCAT
CCTCTTCAACCCGAGCGGGATTGATATTCTCGTCGCCACTCCCCACCTGC
TTGCCTCGATCGCCAAGACGGATCCATATGTGCTGAGTCGCGTCAGCCAC
CTGGTGCTGGATGAGGCGGACTCGCTCATGGATCGGTCCTTCTTGCCTAC
AACGACTGAGATCATTGAAAAGTCAGCCTCTTCTCTTCACAAGCTCATCC
TCTGCTCCGCCACCATTCCCCGCAGTCTCGACAACCTCCTCCGCAAGCGT
TACCCCGACATCCGACGACTGACGACGCCAAACCTGCATGCTATCCCCCG
TCGCGTCCAGCTCGGAGTGGTGGACATCCAACGGGACCCCTACCGTGGCA
ACCGCAGCCTGGCCTGCGCCGACGTGATCTGGTCCATCGGAAAGGCAGGC
GACACAGAACCGACGCACCCTTTCCTGGCCCAGGCCGGACCCAAGGTCAA
GAAGATCCTAGTCTTTGTCAACGAGCGTGAAGAAGCCGACGAGGTAGCCC
AGTTCCTGCGCTCAAAGGGCATCGACGCCCAGTCCTTCTCCCGGGACTCC
AGCAGCCGCAAGCAAGAAGAGCTGCTTGAAGAATTCACCGAGTCCCCGAT
CCCTCCCACCGCAGAGGAGATCATGCTGGCCAAGAACAAGCGCCGCCAGG
ACAACTCCATTCCCTTTGTCTTCCCCGAACAGCAGAACAAGCCGGGCGCG
GAGCGCGGCCTCCCGAACACCAAGGTTCTCGTGACGACGGATATTGCCTC
TCGCGGAATTGACACCATCGCCGTCAAGACGGTCATCCTCTACCACGTCC
CACACAACACGATCGACTTCATCCACCGACTCGGCCGTCTCGGTCGCATG
GGCAAGCGTGGCCGAGCCGTGGTCTTGGTCGGCAAGAAGGACCGCAAGGA
CGTGGTCAAGGAAGTGCGCGAGGGCATGTTCCGCGGCCAGGCCTTGATTT
AG back to topCoding sequence (CDS) from alignment at NKJJ01000007.1:381383..383284+ >CAN33_33400-T1 ID=CAN33_33400-T1|Name=CAN33_33400-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1902bp|location=Sequence derived from alignment at NKJJ01000007.1:381383..383284+ (Aspergillus niger FDAARGOS_311)
ATGAATCGCCTGGGCAGACTGTCTCTGCCGCTACGGCCTCAAGTTTGTCT
GCTCTGTCAGACGCAGGCGACCATGTCCTCTCCTCTCGCCGGATGGCAGG
CCGTCCGCTCCATGGCAACCGTCCGACAGCGCCGCCAGGCCGCCCGCATG
GTTCTGTCCTCCAATGTCGACAAATCCTCCCTGAAGCAAGGACGTTCGAA
GAGAGATCGTGCCGGCCCCTGGTCCGGCATGAACCAGACGGAGGCGCGCC
TTCGGGATGCGCCACGGTCAAGGTCTCGGGCAGCTCTCAAACGCTCGGGT
GATTCCGAAGATGATAAGCAGAAGCCGGACAGTCCTCTCTACAAGGCGCT
CAAGATGCAGACGGCATTGGCGCCCATTCCTTACGGTCGCCGAACCGCCA
TCAAGAACAAGATCGCAGAAGTTTCGAGTTTCGACCAGTTTCCTCTGCTA
CCGGTCGTGCGCCACTCGATCTCTTCCCAAGCTCTTCCCGGACTGGCGGA
CATTGTACCGACTCCCATTCAACGCCTTGCTATCCCACAACTCCTGAAAG
ACCCTATCCCGAAGAGAACATCTAAAGACGTCTCAGACCATGAACCGAAT
ATTGAACAGTACCTTCTGGCCGCCGAGACCGGGTCGGGAAAGACGCTCGC
CTATCTGATTCCCTTGATCGACTCCCTGAAGCGTATGGAAGTGGAGGACA
AGGAATTCGAGAAGTGGGAGGCAGAACAAAAAGCCAAGGAGCGGGAGGAG
AAGCTCAAAAACCGGGCTTTCGACATTGAACCGGAAGAGGCTCCGTTGTC
GGACGCAGGTAGACCGCGGGTCATTATCCTCGTCCCGACCTCCGAGTTGG
TTGCCCAGGTTGGCGCCAAAGTCAAGGCTCTTTCGCACACGGTCAAGTAC
CGGTCGGGGATGATCTCGTCCAACCTGACCCCTCGTCGGATCAAGAGCAT
CCTCTTCAACCCGAGCGGGATTGATATTCTCGTCGCCACTCCCCACCTGC
TTGCCTCGATCGCCAAGACGGATCCATATGTGCTGAGTCGCGTCAGCCAC
CTGGTGCTGGATGAGGCGGACTCGCTCATGGATCGGTCCTTCTTGCCTAC
AACGACTGAGATCATTGAAAAGTCAGCCTCTTCTCTTCACAAGCTCATCC
TCTGCTCCGCCACCATTCCCCGCAGTCTCGACAACCTCCTCCGCAAGCGT
TACCCCGACATCCGACGACTGACGACGCCAAACCTGCATGCTATCCCCCG
TCGCGTCCAGCTCGGAGTGGTGGACATCCAACGGGACCCCTACCGTGGCA
ACCGCAGCCTGGCCTGCGCCGACGTGATCTGGTCCATCGGAAAGGCAGGC
GACACAGAACCGACGCACCCTTTCCTGGCCCAGGCCGGACCCAAGGTCAA
GAAGATCCTAGTCTTTGTCAACGAGCGTGAAGAAGCCGACGAGGTAGCCC
AGTTCCTGCGCTCAAAGGGCATCGACGCCCAGTCCTTCTCCCGGGACTCC
AGCAGCCGCAAGCAAGAAGAGCTGCTTGAAGAATTCACCGAGTCCCCGAT
CCCTCCCACCGCAGAGGAGATCATGCTGGCCAAGAACAAGCGCCGCCAGG
ACAACTCCATTCCCTTTGTCTTCCCCGAACAGCAGAACAAGCCGGGCGCG
GAGCGCGGCCTCCCGAACACCAAGGTTCTCGTGACGACGGATATTGCCTC
TCGCGGAATTGACACCATCGCCGTCAAGACGGTCATCCTCTACCACGTCC
CACACAACACGATCGACTTCATCCACCGACTCGGCCGTCTCGGTCGCATG
GGCAAGCGTGGCCGAGCCGTGGTCTTGGTCGGCAAGAAGGACCGCAAGGA
CGTGGTCAAGGAAGTGCGCGAGGGCATGTTCCGCGGCCAGGCCTTGATTT
AG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005524 | ATP binding |
| GO:0003676 | nucleic acid binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR014014 |
| DBxref | InterPro:IPR011545 |
| DBxref | InterPro:IPR014001 |
| DBxref | InterPro:IPR001650 |
| DBxref | PFAM:PF04851 |
| DBxref | PFAM:PF00271 |
| DBxref | PFAM:PF00270 |
| Product | RNA helicase |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000007.1 | supercontig | NKJJ01000007.1:381383..383284 + |
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