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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000007.1:443560..444223- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_33515-T1 ID=CAN33_33515-T1|Name=CAN33_33515-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=664bp|location=Sequence derived from alignment at NKJJ01000007.1:443560..444223- (Aspergillus niger FDAARGOS_311)
ATGTCCTATTACTTCACAATCCTCTCCCCGACGGACGTCCCCCTCTTCAA
CATCGCCTTCGGCACATCCAAATCCGGGGGTGACGGGATCGCCCGTTTCC
GATTCCCTGATACAGCGCAGTACATGAACCAGTTCATTATCCATTCGAGT
TTGGATATTGTGGAGGAAGCGCAGTGGATGAATGGGAATATGTATATCCC
CTTTTTCTTAATATATTGATAAGTACTGGGCGTAATTGGCCATTATGCTG
ATATCGATGTTGTTTCATGGCAGGTACCTAAAACACATCGACACCTACCC
CCCCGCATCAGCATACATCTCCGCCTTCCTGACCCCCTCCGGGGCAAGGT
TCCTTCTTCTGCATCAGCCGCCCCAGTTAGCTTCGAATAGCGGTCAGGGA
GGGAGTGGGAGTGGTTCGATGGGCGGGTCGATGTCTGGGTCGCTGTTGTT
GGGATCTTCGGGCGGGTCGTCGCGCGCGTCTGCGAGCTCGATAGCTAATA
ATCCGACGTCGCCGCAGACGGAGGAAGCCGTGCGTCAGTTTATGACTGAG
GTGTATGAGAATTATGTGAAGACGGTCATGAGTCCGTTTTATAGACAGGG
AATGGAGATTAAGAGCCCGGTGTTTAGGGGGAGGGTTACGGCTGCGGGGA
GGAAGTGGTTATAG back to topCoding sequence (CDS) from alignment at NKJJ01000007.1:443560..444223- >CAN33_33515-T1 ID=CAN33_33515-T1|Name=CAN33_33515-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1164bp|location=Sequence derived from alignment at NKJJ01000007.1:443560..444223- (Aspergillus niger FDAARGOS_311)
GTACCTAAAACACATCGACACCTACCCCCCCGCATCAGCATACATCTCCG
CCTTCCTGACCCCCTCCGGGGCAAGGTTCCTTCTTCTGCATCAGCCGCCC
CAGTTAGCTTCGAATAGCGGTCAGGGAGGGAGTGGGAGTGGTTCGATGGG
CGGGTCGATGTCTGGGTCGCTGTTGTTGGGATCTTCGGGCGGGTCGTCGC
GCGCGTCTGCGAGCTCGATAGCTAATAATCCGACGTCGCCGCAGACGGAG
GAAGCCGTGCGTCAGTTTATGACTGAGGTGTATGAGAATTATGTGAAGAC
GGTCATGAGTCCGTTTTATAGACAGGGAATGGAGATTAAGAGCCCGGTGT
TTAGGGGGAGGGTTACGGCTGCGGGGAGGAAGTGGTTATAGATGTCCTAT
TACTTCACAATCCTCTCCCCGACGGACGTCCCCCTCTTCAACATCGCCTT
CGGCACATCCAAATCCGGGGGTGACGGGATCGCCCGTTTCCGATTCCCTG
ATACAGCGCAGTACATGAACCAGTTCATTATCCATTCGAGTTTGGATATT
GTGGAGGAAGCGCAGTGGATGAATGGGAATATGTACCTAAAACACATCGA
CACCTACCCCCCCGCATCAGCATACATCTCCGCCTTCCTGACCCCCTCCG
GGGCAAGGTTCCTTCTTCTGCATCAGCCGCCCCAGTTAGCTTCGAATAGC
GGTCAGGGAGGGAGTGGGAGTGGTTCGATGGGCGGGTCGATGTCTGGGTC
GCTGTTGTTGGGATCTTCGGGCGGGTCGTCGCGCGCGTCTGCGAGCTCGA
TAGCTAATAATCCGACGTCGCCGCAGACGGAGGAAGCCGTGCGTCAGTTT
ATGACTGAGGTGTATGAGAATTATGTGAAGACGGTCATGAGTCCGTTTTA
TAGACAGGGAATGGAGATTAAGAGCCCGGTGTTTAGGGGGAGGGTTACGG
CTGCGGGGAGGAAGTGGTTATAGATGTCCTATTACTTCACAATCCTCTCC
CCGACGGACGTCCCCCTCTTCAACATCGCCTTCGGCACATCCAAATCCGG
GGGTGACGGGATCGCCCGTTTCCGATTCCCTGATACAGCGCAGTACATGA
ACCAGTTCATTATCCATTCGAGTTTGGATATTGTGGAGGAAGCGCAGTGG
ATGAATGGGAATAT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006888 | endoplasmic reticulum to Golgi vesicle-mediated transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09265GGX |
| DBxref | InterPro:IPR011012 |
| DBxref | InterPro:IPR006722 |
| DBxref | PFAM:PF04628 |
| Product | Sedlin N-terminal conserved region family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000007.1 | supercontig | NKJJ01000007.1:443560..444223 - |
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