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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000007.1:452406..453410+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_33540-T1 ID=CAN33_33540-T1|Name=CAN33_33540-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1005bp|location=Sequence derived from alignment at NKJJ01000007.1:452406..453410+ (Aspergillus niger FDAARGOS_311)
ATGTCCAAGGCCACCTTCGCGGCCATCGCTGCCGCCAGTGCCGCCACGGG
CGCCGGTCTGACGGCTCTCTTCTACTCCCCTCGACCCCAACCACAACAGC
AGCAACAACTCCCCCAACAACAACTTCCTCCTCACCCTCCGACTACTTCC
TCCGCCAAACTCCCCGCTCCTCAACCCGCCGCTCCCTCTCTCGCCCCCAA
ACCTACCCCAACCAGCGGCTTCCCCGTCGACCCAGCCGGCATCTACCAGT
ATGGCTTCCCCGGTCCCGTGGCCGACACCCTCCTCTCCGCACCCCTAGCA
GGCGCCTACGACCGTCGCACACGCAACCCGTCCTGGGTCGCCGAACACAT
CACCCCGCAGTCGCTCGCACAGAAGAACGCCGACCGCAAGGGCAGCACAT
TCTTCGAAGACACCACGATCCCGCCGCTCTTCCGTGCCAAGCTGTCCGAC
TACTTCCGCTCCGGCTATGACCGCGGCCACCAGGTGCCCGCCGCGGACGC
CAAATGGTCGCAGGACGCCATGGACGCGACCTTCGCACTGTCGAACATGT
GCCCGCAGGTCGGTGAGGGATTCAACCGCGACTACTGGGCCCACTTTGAG
GAGTTCTGCCGTGACTTGACGAAAAAGTACCCCTCCGTCCGGGTGGTTAC
TGGCCCTCTTTACTTGCCTCACCGCGATCAAGATGGAAAGTGGCGTGTCT
CGTACGAGGTTATCGGAAACCCGCCGAATGTTGCTGTCCCCACGCACTTC
TATAAGGTCGTGTATGCGGAGGAGGGCCCTGCTACGGCGGGCAAGGTTGC
GCTGGGCGCGTTTGTGCTGCCTAATGCGAGGATCTCGAATGATAAGCGTT
TGACGGAGTTTGAGGTGCCTCTTGAAGCTGTGGAGCGCGCTAGTGGACTT
GAGTTTGCGGCGAAGTTGGATGCTGGGCGCAGGAAGAGGCTGTGCCAGGA
GGTCAAGTGTGATGTTGTCGTGAGGGAGTTCAACAATGCCAGCAAGAAGA
AATAA back to topCoding sequence (CDS) from alignment at NKJJ01000007.1:452406..453410+ >CAN33_33540-T1 ID=CAN33_33540-T1|Name=CAN33_33540-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1650bp|location=Sequence derived from alignment at NKJJ01000007.1:452406..453410+ (Aspergillus niger FDAARGOS_311)
ATGTCCAAGGCCACCTTCGCGGCCATCGCTGCCGCCAGTGCCGCCACGGG
CGCCGCCGGCATCTACCAGTATGGCTTCCCCGGTCCCGTGGCCGACACCC
TCCTCTCCGCACCCCTAGCAGGCGCCTACGACCGTCGCACACGCAACCCG
TCCTGGGTCGCCGAACACATCACCCCGCAGTCGCTCGCACAGAAGAACGC
CGACCGCAAGGGCAGCACATTCTTCGAAGACACCACGATCCCGCCGCTCT
TCCGTGCCAAGCTGTCCGACTACTTCCGCTCCGGCTATGACCGCGGCCAC
CAGGTGCCCGCCGCGGACGCCAAATGGTCGCAGGACGCCATGGACGCGAC
CTTCGCACTGTCGAACATGTGCCCGCAGGTCGGTGAGGGATTCAACCGCG
ACTACTGGGCCCACTTTGAGGAGTTCTGCCGTGACTTGACGAAAAAGTAC
CCCTCCGTCCGGGTGGTTACTGGCCCTCTTTACTTGCCTCACCGCGATCA
AGATGGAAAGTGGCGTGTCTCGTACGAGGTTATCGGAAACCCGCCGAATG
TTGCTGTCCCCACGCACTTCTATAAGGTCGTGTATGCGGAGGAGGGCCCT
GCTACGGCGGGCAAGGTTGCGCTGGGCGCGTTTGTGCTGCCTAATGCGAG
GATCTCGAATGATAAGCGTTTGACGGAGTTTGAGGTGCCTCTTGAAGCTG
TGGAGCGCGCTAGTGGACTTGAGTTTGCGGCGAAGTTGGATGCTGGGCGC
AGGAAGAGGCTGTGCCAGGAGGTCAAGTGTGATGTTGTCGTGAGGGAGTT
CAACAATGCCAGCAAGAAGAAATAAATGTCCAAGGCCACCTTCGCGGCCA
TCGCTGCCGCCAGTGCCGCCACGGGCGCCGCCGGCATCTACCAGTATGGC
TTCCCCGGTCCCGTGGCCGACACCCTCCTCTCCGCACCCCTAGCAGGCGC
CTACGACCGTCGCACACGCAACCCGTCCTGGGTCGCCGAACACATCACCC
CGCAGTCGCTCGCACAGAAGAACGCCGACCGCAAGGGCAGCACATTCTTC
GAAGACACCACGATCCCGCCGCTCTTCCGTGCCAAGCTGTCCGACTACTT
CCGCTCCGGCTATGACCGCGGCCACCAGGTGCCCGCCGCGGACGCCAAAT
GGTCGCAGGACGCCATGGACGCGACCTTCGCACTGTCGAACATGTGCCCG
CAGGTCGGTGAGGGATTCAACCGCGACTACTGGGCCCACTTTGAGGAGTT
CTGCCGTGACTTGACGAAAAAGTACCCCTCCGTCCGGGTGGTTACTGGCC
CTCTTTACTTGCCTCACCGCGATCAAGATGGAAAGTGGCGTGTCTCGTAC
GAGGTTATCGGAAACCCGCCGAATGTTGCTGTCCCCACGCACTTCTATAA
GGTCGTGTATGCGGAGGAGGGCCCTGCTACGGCGGGCAAGGTTGCGCTGG
GCGCGTTTGTGCTGCCTAATGCGAGGATCTCGAATGATAAGCGTTTGACG
GAGTTTGAGGTGCCTCTTGAAGCTGTGGAGCGCGCTAGTGGACTTGAGTT
TGCGGCGAAGTTGGATGCTGGGCGCAGGAAGAGGCTGTGCCAGGAGGTCA
AGTGTGATGTTGTCGTGAGGGAGTTCAACAATGCCAGCAAGAAGAAATAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
| GO:0046872 | metal ion binding |
| GO:0016787 | hydrolase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG092645MK |
| DBxref | InterPro:IPR018524 |
| DBxref | InterPro:IPR020821 |
| DBxref | InterPro:IPR001604 |
| DBxref | PFAM:PF01223 |
| Product | nuclease |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000007.1 | supercontig | NKJJ01000007.1:452406..453410 + |
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