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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000007.1:453759..455038- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_33545-T1 ID=CAN33_33545-T1|Name=CAN33_33545-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1280bp|location=Sequence derived from alignment at NKJJ01000007.1:453759..455038- (Aspergillus niger FDAARGOS_311)
ATGGCGCACTCTAAACGCAACACCTCCCTTCCTCATTTTACCTCCTACGA
GCGCGATCTTCTCAAGTCAAGCTGGGGCACCAAACGCGGAGTCATCGGCC
GCGACTCTTTCCTCCCATTCGGCTCGTGTCGACTTTGCCTACACCCGGCG
CGGGAACCCGTCGTCGCCTGCGCCACCAACGGTGATCTCTTCTGTCGCGA
ATGCGCCATTAGTGACCTTCTCGCCCAGCGACAGGAAATCAAGCGTCTCG
AAAAGGAACGCGATGAAGCCAAAAAGCGTCTTGCAGAGGAGGAGGAGCGG
GCATTAGATGAAGCGCGAACGCGGGAACTCCGTGATTTCGAACTCGTGAG
CATGGGGTTAGATGCAGCAGCGAAGAAGAACAACGGGTCAAGCCAATCAC
AGAATGATGAGAGCTCAAAGAAACGCAAAGCAGATACCACAGAGGCATTG
GCTGCTTTCAAGGCGCGAGAGGTAGAGGTGGACGGGAAGCGGAAGAAGGT
GTTTGAATTAGATGATAAAGAGATGGCTAGGATCGCGCGCGAGGAGCAAG
AACGGTTGAAAAATGAGCTGAAGAAGGAAAAGGTCTAAGACCATTGTCAA
TCCCCTTGGTAAGCAGCTCGCTGACAATCTCCAGGAATCAAACAAATCAG
CCCTCCCATCCTTCTGGGTCCCCTCGCTCACACCCACCACCGACCCGAAC
GAAATCGCCGCCAACAAAGCCATTAAACTAACCCCCATTTGTCCCGCTTC
CACCGACTCCAACCGCCACAGCTACTCCCTCAAATCCTTAGTTGAGGTGC
ATTTCACCGAAGAAAAGGCCTCCGATGGCTCCCCGGCCCGTGTCTGCCCA
AGCTGCAAGAAAACACTGACAAATGGGCTCAAAGCAATGTGTATGTTTTA
CCTACTTACCCACCGCATATGTCCTCAACGCACCTACTAATACTGTGCTG
CTACATCAAGTAACGAAACCCTGCGGCCACGTCATCTGCCAACCATGCGT
CAACAAATTCATGACTCCGCACGATGCGCCGGACCCGCACGCCTCCAAAG
AAGAGCAGGAGCAGACCGCTGCCCTGCATGGACGGATTCTATGCTATGTT
TGCGAGACGGATGTCACGCCGTCAAAGGACAGTAACAAGGATTCCGGTTC
GGGGAAGAAGAAAAAGAAGGACAAGGAGGGGATTCGCCCTGGTTTGGTGG
AGGTGAGCTCGGAGGGGACAGGGTTTGCGGGGAGAGGGGGGAATGTCGCG
ACTAAGTCGGGGGTTGCGTTTCAGTGTTGA back to topCoding sequence (CDS) from alignment at NKJJ01000007.1:453759..455038- >CAN33_33545-T1 ID=CAN33_33545-T1|Name=CAN33_33545-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4344bp|location=Sequence derived from alignment at NKJJ01000007.1:453759..455038- (Aspergillus niger FDAARGOS_311)
TGTTGATAACGAAACCCTGCGGCCACGTCATCTGCCAACCATGCGTCAAC
AAATTCATGACTCCGCACGATGCGCCGGACCCGCACGCCTCCAAAGAAGA
GCAGGAGCAGACCGCTGCCCTGCATGGACGGATTCTATGCTATGTTTGCG
AGACGGATGTCACGCCGTCAAAGGACAGTAACAAGGATTCCGGTTCGGGG
AAGAAGAAAAAGAAGGACAAGGAGGGGATTCGCCCTGGTTTGGTGGAGGA
ATCAAACAAATCAGCCCTCCCATCCTTCTGGGTCCCCTCGCTCACACCCA
CCACCGACCCGAACGAAATCGCCGCCAACAAAGCCATTAAACTAACCCCC
ATTTGTCCCGCTTCCACCGACTCCAACCGCCACAGCTACTCCCTCAAATC
CTTAGTTGAGGTGCATTTCACCGAAGAAAAGGCCTCCGATGGCTCCCCGG
CCCGTGTCTGCCCAAGCTGCAAGAAAACACTGACAAATGGGCTCAAAGCA
ATGTATGGCGCACTCTAAACGCAACACCTCCCTTCCTCATTTTACCTCCT
ACGAGCGCGATCTTCTCAAGTCAAGCTGGGGCACCAAACGCGGAGTCATC
GGCCGCGACTCTTTCCTCCCATTCGGCTCGTGTCGACTTTGCCTACACCC
GGCGCGGGAACCCGTCGTCGCCTGCGCCACCAACGGTGATCTCTTCTGTC
GCGAATGCGCCATTAGTGACCTTCTCGCCCAGCGACAGGAAATCAAGCGT
CTCGAAAAGGAACGCGATGAAGCCAAAAAGCGTCTTGCAGAGGAGGAGGA
GCGGGCATTAGATGAAGCGCGAACGCGGGAACTCCGTGATTTCGAACTCG
TGAGCATGGGGTTAGATGCAGCAGCGAAGAAGAACAACGGGTCAAGCCAA
TCACAGAATGATGAGAGCTCAAAGAAACGCAAAGCAGATACCACAGAGGC
ATTGGCTGCTTTCAAGGCGCGAGAGGTAGAGGTGGACGGGAAGCGGAAGA
AGGTGTTTGAATTAGATGATAAAGAGATGGCTAGGATCGCGCGCGAGGAG
CAAGAACGGTTGAAAAATGAGCTGAAGAAGGAAAAGTGTTGATAACGAAA
CCCTGCGGCCACGTCATCTGCCAACCATGCGTCAACAAATTCATGACTCC
GCACGATGCGCCGGACCCGCACGCCTCCAAAGAAGAGCAGGAGCAGACCG
CTGCCCTGCATGGACGGATTCTATGCTATGTTTGCGAGACGGATGTCACG
CCGTCAAAGGACAGTAACAAGGATTCCGGTTCGGGGAAGAAGAAAAAGAA
GGACAAGGAGGGGATTCGCCCTGGTTTGGTGGAGGAATCAAACAAATCAG
CCCTCCCATCCTTCTGGGTCCCCTCGCTCACACCCACCACCGACCCGAAC
GAAATCGCCGCCAACAAAGCCATTAAACTAACCCCCATTTGTCCCGCTTC
CACCGACTCCAACCGCCACAGCTACTCCCTCAAATCCTTAGTTGAGGTGC
ATTTCACCGAAGAAAAGGCCTCCGATGGCTCCCCGGCCCGTGTCTGCCCA
AGCTGCAAGAAAACACTGACAAATGGGCTCAAAGCAATGTATGGCGCACT
CTAAACGCAACACCTCCCTTCCTCATTTTACCTCCTACGAGCGCGATCTT
CTCAAGTCAAGCTGGGGCACCAAACGCGGAGTCATCGGCCGCGACTCTTT
CCTCCCATTCGGCTCGTGTCGACTTTGCCTACACCCGGCGCGGGAACCCG
TCGTCGCCTGCGCCACCAACGGTGATCTCTTCTGTCGCGAATGCGCCATT
AGTGACCTTCTCGCCCAGCGACAGGAAATCAAGCGTCTCGAAAAGGAACG
CGATGAAGCCAAAAAGCGTCTTGCAGAGGAGGAGGAGCGGGCATTAGATG
AAGCGCGAACGCGGGAACTCCGTGATTTCGAACTCGTGAGCATGGGGTTA
GATGCAGCAGCGAAGAAGAACAACGGGTCAAGCCAATCACAGAATGATGA
GAGCTCAAAGAAACGCAAAGCAGATACCACAGAGGCATTGGCTGCTTTCA
AGGCGCGAGAGGTAGAGGTGGACGGGAAGCGGAAGAAGGTGTTTGAATTA
GATGATAAAGAGATGGCTAGGATCGCGCGCGAGGAGCAAGAACGGTTGAA
AAATGAGCTGAAGAAGGAAAAGTGTTGATAACGAAACCCTGCGGCCACGT
CATCTGCCAACCATGCGTCAACAAATTCATGACTCCGCACGATGCGCCGG
ACCCGCACGCCTCCAAAGAAGAGCAGGAGCAGACCGCTGCCCTGCATGGA
CGGATTCTATGCTATGTTTGCGAGACGGATGTCACGCCGTCAAAGGACAG
TAACAAGGATTCCGGTTCGGGGAAGAAGAAAAAGAAGGACAAGGAGGGGA
TTCGCCCTGGTTTGGTGGAGGAATCAAACAAATCAGCCCTCCCATCCTTC
TGGGTCCCCTCGCTCACACCCACCACCGACCCGAACGAAATCGCCGCCAA
CAAAGCCATTAAACTAACCCCCATTTGTCCCGCTTCCACCGACTCCAACC
GCCACAGCTACTCCCTCAAATCCTTAGTTGAGGTGCATTTCACCGAAGAA
AAGGCCTCCGATGGCTCCCCGGCCCGTGTCTGCCCAAGCTGCAAGAAAAC
ACTGACAAATGGGCTCAAAGCAATGTATGGCGCACTCTAAACGCAACACC
TCCCTTCCTCATTTTACCTCCTACGAGCGCGATCTTCTCAAGTCAAGCTG
GGGCACCAAACGCGGAGTCATCGGCCGCGACTCTTTCCTCCCATTCGGCT
CGTGTCGACTTTGCCTACACCCGGCGCGGGAACCCGTCGTCGCCTGCGCC
ACCAACGGTGATCTCTTCTGTCGCGAATGCGCCATTAGTGACCTTCTCGC
CCAGCGACAGGAAATCAAGCGTCTCGAAAAGGAACGCGATGAAGCCAAAA
AGCGTCTTGCAGAGGAGGAGGAGCGGGCATTAGATGAAGCGCGAACGCGG
GAACTCCGTGATTTCGAACTCGTGAGCATGGGGTTAGATGCAGCAGCGAA
GAAGAACAACGGGTCAAGCCAATCACAGAATGATGAGAGCTCAAAGAAAC
GCAAAGCAGATACCACAGAGGCATTGGCTGCTTTCAAGGCGCGAGAGGTA
GAGGTGGACGGGAAGCGGAAGAAGGTGTTTGAATTAGATGATAAAGAGAT
GGCTAGGATCGCGCGCGAGGAGCAAGAACGGTTGAAAAATGAGCTGAAGA
AGGAAAAGTGTTGATAACGAAACCCTGCGGCCACGTCATCTGCCAACCAT
GCGTCAACAAATTCATGACTCCGCACGATGCGCCGGACCCGCACGCCTCC
AAAGAAGAGCAGGAGCAGACCGCTGCCCTGCATGGACGGATTCTATGCTA
TGTTTGCGAGACGGATGTCACGCCGTCAAAGGACAGTAACAAGGATTCCG
GTTCGGGGAAGAAGAAAAAGAAGGACAAGGAGGGGATTCGCCCTGGTTTG
GTGGAGGAATCAAACAAATCAGCCCTCCCATCCTTCTGGGTCCCCTCGCT
CACACCCACCACCGACCCGAACGAAATCGCCGCCAACAAAGCCATTAAAC
TAACCCCCATTTGTCCCGCTTCCACCGACTCCAACCGCCACAGCTACTCC
CTCAAATCCTTAGTTGAGGTGCATTTCACCGAAGAAAAGGCCTCCGATGG
CTCCCCGGCCCGTGTCTGCCCAAGCTGCAAGAAAACACTGACAAATGGGC
TCAAAGCAATGTATGGCGCACTCTAAACGCAACACCTCCCTTCCTCATTT
TACCTCCTACGAGCGCGATCTTCTCAAGTCAAGCTGGGGCACCAAACGCG
GAGTCATCGGCCGCGACTCTTTCCTCCCATTCGGCTCGTGTCGACTTTGC
CTACACCCGGCGCGGGAACCCGTCGTCGCCTGCGCCACCAACGGTGATCT
CTTCTGTCGCGAATGCGCCATTAGTGACCTTCTCGCCCAGCGACAGGAAA
TCAAGCGTCTCGAAAAGGAACGCGATGAAGCCAAAAAGCGTCTTGCAGAG
GAGGAGGAGCGGGCATTAGATGAAGCGCGAACGCGGGAACTCCGTGATTT
CGAACTCGTGAGCATGGGGTTAGATGCAGCAGCGAAGAAGAACAACGGGT
CAAGCCAATCACAGAATGATGAGAGCTCAAAGAAACGCAAAGCAGATACC
ACAGAGGCATTGGCTGCTTTCAAGGCGCGAGAGGTAGAGGTGGACGGGAA
GCGGAAGAAGGTGTTTGAATTAGATGATAAAGAGATGGCTAGGATCGCGC
GCGAGGAGCAAGAACGGTTGAAAAATGAGCTGAAGAAGGAAAAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0061630 | ubiquitin protein ligase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR001841 |
| DBxref | InterPro:IPR017907 |
| DBxref | InterPro:IPR013083 |
| DBxref | InterPro:IPR016818 |
| DBxref | InterPro:IPR027370 |
| DBxref | PFAM:PF13445 |
| Product | Zinc finger C3HC4 type (RING finger) family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000007.1 | supercontig | NKJJ01000007.1:453759..455038 - |
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