|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000007.1:501676..502787+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_33620-T1 ID=CAN33_33620-T1|Name=CAN33_33620-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1112bp|location=Sequence derived from alignment at NKJJ01000007.1:501676..502787+ (Aspergillus niger FDAARGOS_311)
ATGGTATCCCTTGAAGCTGTCCGCGCTCACAACAGCAATTTAGAAGATCT
CGGCACGGGACTCGTTGCTGTATTTGGTGCGTTCAACCCCTCTTGAGACG
CTGTAGCTGATGTTCCAGTCGGTGGTACGAGTGGAATTGGACTCTACGCT
GCGCGTGAATTCGTCCGCCATACTCTATCTCCGACGGTCTATCTAGTTGG
CCGCAACGAGATTCGCGCAACAGAGATCATTGACGACTTGAAGTCGCTGA
ATCCGAGCTCCCAGATTAGATTTCTCAAAGCGGACGTATCGCTATTGAAG
GAGGTGGACTCGACATGTGCCGTGATTCGAAGCCAGGTCAACCATGTCAA
CGTGTTATTCCTCAGCTGCGGTATTTTTACGCTCAACCGTAGTAGAGAAG
GTGCGTCTGAGAGTCGAGTCGTCCCTAGACCTTAAATAGTTACCTTCATA
ATCTAATCTAATTCGCCATACATACAGACACCTCGGAAGGCCTCGACAAA
AAGCTCAGTCTCCATTACTACGCTCGCATGCGCTTCATCCACAACCTAAT
GCCGCAGTTGACCCGCGCCAGCTGTGTCCCTTGCTCTGAGGGTAGTCGTA
ACCTCTCCCGGGTTATATCCGTTCTAGGCGGTGGCCATGAAACAGAGCTA
TATCTTGACGATCTCGACCTGCAGAATCACTACGGGGTCGAGAATTGCGA
TGTCCACGCAACAACCATGACATCCTTAATGGTCGAAGAGCTTGCGTCGC
GGTATCCGTCGACGACATTTATCCACACGTATCCTGGGATTGTGAATTCG
GGGATCTCTCGCGAAGCGGGCCGATTCGTAGGCTGCATTGTCAAGGCCGT
ATTGTTTCTAGGTCGGCCGTGGATGGTGTCGGAGAAGGAGAGCGGCGAGC
GGAGTCTTTTTGCGGCAACGAGTAGAGAGCTCTCTACGTCTGCGAAGAGT
ACCACTGGAGATGGCAAAGGGGGTGCTATGATACTGAACTGGGACGGGTC
TGAGGTGGGCAATCGAAGGCTCCTCGAGGAGTATCGGAAAAAGGGTGTTG
GTGATATGGTGTGGAAGCATACGGAGGAGATTTTTCTGAAGGCTTCCAAG
GCTCCTTCTTGA back to topCoding sequence (CDS) from alignment at NKJJ01000007.1:501676..502787+ >CAN33_33620-T1 ID=CAN33_33620-T1|Name=CAN33_33620-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2979bp|location=Sequence derived from alignment at NKJJ01000007.1:501676..502787+ (Aspergillus niger FDAARGOS_311)
ATGGTATCCCTTGAAGCTGTCCGCGCTCACAACAGCAATTTAGAAGATCT
CGGCACGGGACTCGTTGCTGTATTTGTCGGTGGTACGAGTGGAATTGGAC
TCTACGCTGCGCGTGAATTCGTCCGCCATACTCTATCTCCGACGGTCTAT
CTAGTTGGCCGCAACGAGATTCGCGCAACAGAGATCATTGACGACTTGAA
GTCGCTGAATCCGAGCTCCCAGATTAGATTTCTCAAAGCGGACGTATCGC
TATTGAAGGAGGTGGACTCGACATGTGCCGTGATTCGAAGCCAGGTCAAC
CATGTCAACGTGTTATTCCTCAGCTGCGGTATTTTTACGCTCAACCGTAG
TAGAGAAGACACCTCGGAAGGCCTCGACAAAAAGCTCAGTCTCCATTACT
ACGCTCGCATGCGCTTCATCCACAACCTAATGCCGCAGTTGACCCGCGCC
AGCTGTGTCCCTTGCTCTGAGGGTAGTCGTAACCTCTCCCGGGTTATATC
CGTTCTAGGCGGTGGCCATGAAACAGAGCTATATCTTGACGATCTCGACC
TGCAGAATCACTACGGGGTCGAGAATTGCGATGTCCACGCAACAACCATG
ACATCCTTAATGGTCGAAGAGCTTGCGTCGCGGTATCCGTCGACGACATT
TATCCACACGTATCCTGGGATTGTGAATTCGGGGATCTCTCGCGAAGCGG
GCCGATTCGTAGGCTGCATTGTCAAGGCCGTATTGTTTCTAGGTCGGCCG
TGGATGGTGTCGGAGAAGGAGAGCGGCGAGCGGAGTCTTTTTGCGGCAAC
GAGTAGAGAGCTCTCTACGTCTGCGAAGAGTACCACTGGAGATGGCAAAG
GGGGTGCTATGATACTGAACTGGGACGGGTCTGAGGTGGGCAATCGAAGG
CTCCTCGAGGAGTATCGGAAAAAGGGTGTTGGTGATATGGTGTGGAAGCA
TACGGAGGAGATTTTTCTGAAGGCTTCCAAGGCTCCTTCTTGAATGGTAT
CCCTTGAAGCTGTCCGCGCTCACAACAGCAATTTAGAAGATCTCGGCACG
GGACTCGTTGCTGTATTTGTCGGTGGTACGAGTGGAATTGGACTCTACGC
TGCGCGTGAATTCGTCCGCCATACTCTATCTCCGACGGTCTATCTAGTTG
GCCGCAACGAGATTCGCGCAACAGAGATCATTGACGACTTGAAGTCGCTG
AATCCGAGCTCCCAGATTAGATTTCTCAAAGCGGACGTATCGCTATTGAA
GGAGGTGGACTCGACATGTGCCGTGATTCGAAGCCAGGTCAACCATGTCA
ACGTGTTATTCCTCAGCTGCGGTATTTTTACGCTCAACCGTAGTAGAGAA
GACACCTCGGAAGGCCTCGACAAAAAGCTCAGTCTCCATTACTACGCTCG
CATGCGCTTCATCCACAACCTAATGCCGCAGTTGACCCGCGCCAGCTGTG
TCCCTTGCTCTGAGGGTAGTCGTAACCTCTCCCGGGTTATATCCGTTCTA
GGCGGTGGCCATGAAACAGAGCTATATCTTGACGATCTCGACCTGCAGAA
TCACTACGGGGTCGAGAATTGCGATGTCCACGCAACAACCATGACATCCT
TAATGGTCGAAGAGCTTGCGTCGCGGTATCCGTCGACGACATTTATCCAC
ACGTATCCTGGGATTGTGAATTCGGGGATCTCTCGCGAAGCGGGCCGATT
CGTAGGCTGCATTGTCAAGGCCGTATTGTTTCTAGGTCGGCCGTGGATGG
TGTCGGAGAAGGAGAGCGGCGAGCGGAGTCTTTTTGCGGCAACGAGTAGA
GAGCTCTCTACGTCTGCGAAGAGTACCACTGGAGATGGCAAAGGGGGTGC
TATGATACTGAACTGGGACGGGTCTGAGGTGGGCAATCGAAGGCTCCTCG
AGGAGTATCGGAAAAAGGGTGTTGGTGATATGGTGTGGAAGCATACGGAG
GAGATTTTTCTGAAGGCTTCCAAGGCTCCTTCTTGAATGGTATCCCTTGA
AGCTGTCCGCGCTCACAACAGCAATTTAGAAGATCTCGGCACGGGACTCG
TTGCTGTATTTGTCGGTGGTACGAGTGGAATTGGACTCTACGCTGCGCGT
GAATTCGTCCGCCATACTCTATCTCCGACGGTCTATCTAGTTGGCCGCAA
CGAGATTCGCGCAACAGAGATCATTGACGACTTGAAGTCGCTGAATCCGA
GCTCCCAGATTAGATTTCTCAAAGCGGACGTATCGCTATTGAAGGAGGTG
GACTCGACATGTGCCGTGATTCGAAGCCAGGTCAACCATGTCAACGTGTT
ATTCCTCAGCTGCGGTATTTTTACGCTCAACCGTAGTAGAGAAGACACCT
CGGAAGGCCTCGACAAAAAGCTCAGTCTCCATTACTACGCTCGCATGCGC
TTCATCCACAACCTAATGCCGCAGTTGACCCGCGCCAGCTGTGTCCCTTG
CTCTGAGGGTAGTCGTAACCTCTCCCGGGTTATATCCGTTCTAGGCGGTG
GCCATGAAACAGAGCTATATCTTGACGATCTCGACCTGCAGAATCACTAC
GGGGTCGAGAATTGCGATGTCCACGCAACAACCATGACATCCTTAATGGT
CGAAGAGCTTGCGTCGCGGTATCCGTCGACGACATTTATCCACACGTATC
CTGGGATTGTGAATTCGGGGATCTCTCGCGAAGCGGGCCGATTCGTAGGC
TGCATTGTCAAGGCCGTATTGTTTCTAGGTCGGCCGTGGATGGTGTCGGA
GAAGGAGAGCGGCGAGCGGAGTCTTTTTGCGGCAACGAGTAGAGAGCTCT
CTACGTCTGCGAAGAGTACCACTGGAGATGGCAAAGGGGGTGCTATGATA
CTGAACTGGGACGGGTCTGAGGTGGGCAATCGAAGGCTCCTCGAGGAGTA
TCGGAAAAAGGGTGTTGGTGATATGGTGTGGAAGCATACGGAGGAGATTT
TTCTGAAGGCTTCCAAGGCTCCTTCTTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR002347 |
| DBxref | PFAM:PF08659 |
| DBxref | PFAM:PF00106 |
| Product | short chain dehydrogenase family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000007.1 | supercontig | NKJJ01000007.1:501676..502787 + |
|
