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CAN33_33760-T1, CAN33_33760-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_33760-T1
Unique NameCAN33_33760-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000007.1:579025..580302+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_33760-T1 ID=CAN33_33760-T1|Name=CAN33_33760-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1278bp|location=Sequence derived from alignment at NKJJ01000007.1:579025..580302+ (Aspergillus niger FDAARGOS_311)
ATGGCCACTGTCAACATTCGTCGGGATGTCTCCGATCCCTTCTACCGTTA
CAAGATGGAGCGCCTTCAGTCCAAGATTGAGGGCAAGGGCAACGGTATCA
AGACCGTCGTCGTCAACCTGAACTCGGTCGCTCAGTCGCTCAGTCGGCCT
CCGTCTTACGTGATCAAGTACTTTGGCTTCGAGCTGGGTGCTCAGGCCAA
CGCCAAGCCCACCGATGATCGCTGGATCATCAACGGTGCCCATGATGCCC
CCAAGCTTCAAGACTATCTGGACGGCTTTATTTCCAAGTTCGTGCTGTGC
AAGAAATGTAAGAATCCGGAAACGGATGTCATCATCAAGGATGAGAAGAT
CTTTTTGGACTGCAAGGCCTGTGGACAGCGCTCCGAGGTCGACTCCCGTC
TGAAACTGAGCACCTTCATCATCCGCAACGGCGCGCAAGGCAAGGGAGGG
AAGAAGGACAAGGCCTCGAAGAAGGCCCGTCGTGATCGAAACAAGGAGAA
GAATGACACCGCGAATGGCGACAAGGATGGCAGCCCCGGAGATAGCAACA
ACTCCGAGAACGGTGATGAGGAGAACGGCGATGTCGCCCTGGAAGCAGGT
AGCGATGACGAACTCACTCGCCGTATCAAGGCCGGTGCCAAGGACATCGA
GGCTGATGAGATCGATGATGATGAATGGGCTGTTGACGTGTCGGAGGAGG
CCGTCAAGGCTCGTGCCAAGGAGCTCCCCGATGATCTCAAGCGCTCCCTC
GTTCTCGAGGATGGTGATGACGAGGGTGCTGACGGCCCCTCTGCCTACGA
CGAGCTTGGCAGCTGGATCCTCAACGCCGCTTCTGAGAAGGGCGGTGTCA
CCGCTGTTAGTGACGTCGATATCTACATGAAGGCCAAGGAATACGGCATC
GAGAACAAGCACAAGACTGTCGCTGTTTTGGCTCAGACCATCTTCGATGA
GAAGATCGCCAAGCAGGTTCCTTCCCGTGCTGCTCTGCTGAAGAAGATGA
TCACCTCCGAACGCCACGAGAAGGCCTTCCTCGGTGGAACCGAGCGCTTT
GTCGGCAAGGATCACCCTGAGCTCATTAGCCAGGTCCCCGCTGTCTTGCT
CAAGTACTATGAGCACGACCTCGTCTCTGAGGAGACCCTCAAGGCGTGGG
GTTCCAAGGCTAGCAAGAAGTATGTCGACATCCAGACCAGCAAGAAGGTC
CGCAAGGCTGCTGAACCCTTCCTCGAATGGCTTGAGAACGCCGAGAGTGA
GGAGGAGAGCGAGGAGGAGAGCGACTAG
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Coding sequence (CDS) from alignment at NKJJ01000007.1:579025..580302+

>CAN33_33760-T1 ID=CAN33_33760-T1|Name=CAN33_33760-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1278bp|location=Sequence derived from alignment at NKJJ01000007.1:579025..580302+ (Aspergillus niger FDAARGOS_311)
ATGGCCACTGTCAACATTCGTCGGGATGTCTCCGATCCCTTCTACCGTTA
CAAGATGGAGCGCCTTCAGTCCAAGATTGAGGGCAAGGGCAACGGTATCA
AGACCGTCGTCGTCAACCTGAACTCGGTCGCTCAGTCGCTCAGTCGGCCT
CCGTCTTACGTGATCAAGTACTTTGGCTTCGAGCTGGGTGCTCAGGCCAA
CGCCAAGCCCACCGATGATCGCTGGATCATCAACGGTGCCCATGATGCCC
CCAAGCTTCAAGACTATCTGGACGGCTTTATTTCCAAGTTCGTGCTGTGC
AAGAAATGTAAGAATCCGGAAACGGATGTCATCATCAAGGATGAGAAGAT
CTTTTTGGACTGCAAGGCCTGTGGACAGCGCTCCGAGGTCGACTCCCGTC
TGAAACTGAGCACCTTCATCATCCGCAACGGCGCGCAAGGCAAGGGAGGG
AAGAAGGACAAGGCCTCGAAGAAGGCCCGTCGTGATCGAAACAAGGAGAA
GAATGACACCGCGAATGGCGACAAGGATGGCAGCCCCGGAGATAGCAACA
ACTCCGAGAACGGTGATGAGGAGAACGGCGATGTCGCCCTGGAAGCAGGT
AGCGATGACGAACTCACTCGCCGTATCAAGGCCGGTGCCAAGGACATCGA
GGCTGATGAGATCGATGATGATGAATGGGCTGTTGACGTGTCGGAGGAGG
CCGTCAAGGCTCGTGCCAAGGAGCTCCCCGATGATCTCAAGCGCTCCCTC
GTTCTCGAGGATGGTGATGACGAGGGTGCTGACGGCCCCTCTGCCTACGA
CGAGCTTGGCAGCTGGATCCTCAACGCCGCTTCTGAGAAGGGCGGTGTCA
CCGCTGTTAGTGACGTCGATATCTACATGAAGGCCAAGGAATACGGCATC
GAGAACAAGCACAAGACTGTCGCTGTTTTGGCTCAGACCATCTTCGATGA
GAAGATCGCCAAGCAGGTTCCTTCCCGTGCTGCTCTGCTGAAGAAGATGA
TCACCTCCGAACGCCACGAGAAGGCCTTCCTCGGTGGAACCGAGCGCTTT
GTCGGCAAGGATCACCCTGAGCTCATTAGCCAGGTCCCCGCTGTCTTGCT
CAAGTACTATGAGCACGACCTCGTCTCTGAGGAGACCCTCAAGGCGTGGG
GTTCCAAGGCTAGCAAGAAGTATGTCGACATCCAGACCAGCAAGAAGGTC
CGCAAGGCTGCTGAACCCTTCCTCGAATGGCTTGAGAACGCCGAGAGTGA
GGAGGAGAGCGAGGAGGAGAGCGACTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0003743translation initiation factor activity
Vocabulary: Biological Process
TermDefinition
GO:0006413translational initiation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_33760CAN33_33760Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_33760-T1.exon1CAN33_33760-T1.exon1Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_33760-T1.cdsCAN33_33760-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_33760-T1CAN33_33760-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09262M7B
DBxrefInterPro:IPR016189
DBxrefInterPro:IPR016190
DBxrefInterPro:IPR016024
DBxrefInterPro:IPR016021
DBxrefInterPro:IPR003307
DBxrefInterPro:IPR002735
DBxrefPFAM:PF02020
DBxrefPFAM:PF01873
ProductDomain found in IF2B/IF5 family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000007.1supercontigNKJJ01000007.1:579025..580302 +
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