You are here

Home

CAN33_33800-T1, CAN33_33800-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_33800-T1
Unique NameCAN33_33800-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000007.1:607900..608986-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_33800-T1 ID=CAN33_33800-T1|Name=CAN33_33800-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1087bp|location=Sequence derived from alignment at NKJJ01000007.1:607900..608986- (Aspergillus niger FDAARGOS_311)
ATGTCCGGGAACCCCAGGGATCAGTTGTACAAGCTCCAGATGGCCCTCCA
AAACCGCCGCGGCGGTTTTGGTGGCGGCTTCGGTGGTGGTAATCCTCGCG
CCGGCATGGGTCTCGCTACTTTGCTCCTCACTGGACTTGGAGTATATGCT
GTTTCCAACTCGCTGTTCAACGGTGAGCTCATTATCGTGCATAATGGGTG
GAAGTATTGTTTTTACTGACGGCTACTGCAGTTGATGGTGGTCACCGTGC
GATCAAGTACTCCAGAGTAGGTGGTGTCAAGAAGGAAATCTACAGTGAAG
GTAAGCATACTCAATACTCTGCAGTCGGCTCATCTAACAGGCTGTCCTTC
TAGGAACTCACCTTCGGATTCCCTGGATCGAAACTCCTATTATCTATGAT
GTCCGCGCAAAGCCGCGCAATATTGCTTCCCTTACCGGTACCAAGGACTT
GCAGATGGTGAACATCACCTGCCGTGTCCTGTCCAGACCCCGTGTGGACG
CCCTCCCCCAAATATACCGTACCCTGGGACAGGACTTTGATGAGCGTGTG
CTCCCTTCGATTGTGAACGAGGTCTTGAAGAGTGTGGTGGCACAATTCAA
CGCCAGTCAGTTGATCACTCAGCGTGAGAACGTTGCCCGCCTGGTCCGGG
AGAACCTTGCTCGTCGGGCTGCTCGCTTCAACATTGCCTTGGACGATGTG
TCGCTTACGGTATGCTATTCCTACTATCACTTCTTTTATCCGTCTCGCTA
ATACCTGCCATAGCACTTGACCTTCTCCCCCGAATTCACCGCCGCCGTCG
AAGCCAAGCAGGTTGCTCAGCAGGAAGCCCAGCGGGCCGCTTTCCTGGTC
GACAAGGCCCGCCAGGAGAAGCAGGCATTCATTGTGCGCGCTCAGGGTGA
GGCTCGTTCAGCCGAGCTGATCGGTGATGCCATCAAGAAGAGCAAGAGTT
ACATCGAGCTGCGGAAGATCGAGAACGCCCGCCAAATCGCCCAGATCCTG
CAGGAGAACGGTGGCCGGAACAAGCTGTACCTGGACAGCCAGGGATTGGG
CCTGAACGTCAACGCGGGCTCCGACGACACGAAATAA
back to top

Coding sequence (CDS) from alignment at NKJJ01000007.1:607900..608986-

>CAN33_33800-T1 ID=CAN33_33800-T1|Name=CAN33_33800-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3684bp|location=Sequence derived from alignment at NKJJ01000007.1:607900..608986- (Aspergillus niger FDAARGOS_311)
CACTTGACCTTCTCCCCCGAATTCACCGCCGCCGTCGAAGCCAAGCAGGT
TGCTCAGCAGGAAGCCCAGCGGGCCGCTTTCCTGGTCGACAAGGCCCGCC
AGGAGAAGCAGGCATTCATTGTGCGCGCTCAGGGTGAGGCTCGTTCAGCC
GAGCTGATCGGTGATGCCATCAAGAAGAGCAAGAGTTACATCGAGCTGCG
GAAGATCGAGAACGCCCGCCAAATCGCCCAGATCCTGCAGGAGAACGGTG
GCCGGAACAAGCTGTACCTGGACAGCCAGGGATTGGGCCTGAACGTCAAC
GCGGGCTCCGACGACACGAAATAAGAACTCACCTTCGGATTCCCTGGATC
GAAACTCCTATTATCTATGATGTCCGCGCAAAGCCGCGCAATATTGCTTC
CCTTACCGGTACCAAGGACTTGCAGATGGTGAACATCACCTGCCGTGTCC
TGTCCAGACCCCGTGTGGACGCCCTCCCCCAAATATACCGTACCCTGGGA
CAGGACTTTGATGAGCGTGTGCTCCCTTCGATTGTGAACGAGGTCTTGAA
GAGTGTGGTGGCACAATTCAACGCCAGTCAGTTGATCACTCAGCGTGAGA
ACGTTGCCCGCCTGGTCCGGGAGAACCTTGCTCGTCGGGCTGCTCGCTTC
AACATTGCCTTGGACGATGTGTCGCTTACGTTGATGGTGGTCACCGTGCG
ATCAAGTACTCCAGAGTAGGTGGTGTCAAGAAGGAAATCTACAGTGAAGA
TGTCCGGGAACCCCAGGGATCAGTTGTACAAGCTCCAGATGGCCCTCCAA
AACCGCCGCGGCGGTTTTGGTGGCGGCTTCGGTGGTGGTAATCCTCGCGC
CGGCATGGGTCTCGCTACTTTGCTCCTCACTGGACTTGGAGTATATGCTG
TTTCCAACTCGCTGTTCAACGCACTTGACCTTCTCCCCCGAATTCACCGC
CGCCGTCGAAGCCAAGCAGGTTGCTCAGCAGGAAGCCCAGCGGGCCGCTT
TCCTGGTCGACAAGGCCCGCCAGGAGAAGCAGGCATTCATTGTGCGCGCT
CAGGGTGAGGCTCGTTCAGCCGAGCTGATCGGTGATGCCATCAAGAAGAG
CAAGAGTTACATCGAGCTGCGGAAGATCGAGAACGCCCGCCAAATCGCCC
AGATCCTGCAGGAGAACGGTGGCCGGAACAAGCTGTACCTGGACAGCCAG
GGATTGGGCCTGAACGTCAACGCGGGCTCCGACGACACGAAATAAGAACT
CACCTTCGGATTCCCTGGATCGAAACTCCTATTATCTATGATGTCCGCGC
AAAGCCGCGCAATATTGCTTCCCTTACCGGTACCAAGGACTTGCAGATGG
TGAACATCACCTGCCGTGTCCTGTCCAGACCCCGTGTGGACGCCCTCCCC
CAAATATACCGTACCCTGGGACAGGACTTTGATGAGCGTGTGCTCCCTTC
GATTGTGAACGAGGTCTTGAAGAGTGTGGTGGCACAATTCAACGCCAGTC
AGTTGATCACTCAGCGTGAGAACGTTGCCCGCCTGGTCCGGGAGAACCTT
GCTCGTCGGGCTGCTCGCTTCAACATTGCCTTGGACGATGTGTCGCTTAC
GTTGATGGTGGTCACCGTGCGATCAAGTACTCCAGAGTAGGTGGTGTCAA
GAAGGAAATCTACAGTGAAGATGTCCGGGAACCCCAGGGATCAGTTGTAC
AAGCTCCAGATGGCCCTCCAAAACCGCCGCGGCGGTTTTGGTGGCGGCTT
CGGTGGTGGTAATCCTCGCGCCGGCATGGGTCTCGCTACTTTGCTCCTCA
CTGGACTTGGAGTATATGCTGTTTCCAACTCGCTGTTCAACGCACTTGAC
CTTCTCCCCCGAATTCACCGCCGCCGTCGAAGCCAAGCAGGTTGCTCAGC
AGGAAGCCCAGCGGGCCGCTTTCCTGGTCGACAAGGCCCGCCAGGAGAAG
CAGGCATTCATTGTGCGCGCTCAGGGTGAGGCTCGTTCAGCCGAGCTGAT
CGGTGATGCCATCAAGAAGAGCAAGAGTTACATCGAGCTGCGGAAGATCG
AGAACGCCCGCCAAATCGCCCAGATCCTGCAGGAGAACGGTGGCCGGAAC
AAGCTGTACCTGGACAGCCAGGGATTGGGCCTGAACGTCAACGCGGGCTC
CGACGACACGAAATAAGAACTCACCTTCGGATTCCCTGGATCGAAACTCC
TATTATCTATGATGTCCGCGCAAAGCCGCGCAATATTGCTTCCCTTACCG
GTACCAAGGACTTGCAGATGGTGAACATCACCTGCCGTGTCCTGTCCAGA
CCCCGTGTGGACGCCCTCCCCCAAATATACCGTACCCTGGGACAGGACTT
TGATGAGCGTGTGCTCCCTTCGATTGTGAACGAGGTCTTGAAGAGTGTGG
TGGCACAATTCAACGCCAGTCAGTTGATCACTCAGCGTGAGAACGTTGCC
CGCCTGGTCCGGGAGAACCTTGCTCGTCGGGCTGCTCGCTTCAACATTGC
CTTGGACGATGTGTCGCTTACGTTGATGGTGGTCACCGTGCGATCAAGTA
CTCCAGAGTAGGTGGTGTCAAGAAGGAAATCTACAGTGAAGATGTCCGGG
AACCCCAGGGATCAGTTGTACAAGCTCCAGATGGCCCTCCAAAACCGCCG
CGGCGGTTTTGGTGGCGGCTTCGGTGGTGGTAATCCTCGCGCCGGCATGG
GTCTCGCTACTTTGCTCCTCACTGGACTTGGAGTATATGCTGTTTCCAAC
TCGCTGTTCAACGCACTTGACCTTCTCCCCCGAATTCACCGCCGCCGTCG
AAGCCAAGCAGGTTGCTCAGCAGGAAGCCCAGCGGGCCGCTTTCCTGGTC
GACAAGGCCCGCCAGGAGAAGCAGGCATTCATTGTGCGCGCTCAGGGTGA
GGCTCGTTCAGCCGAGCTGATCGGTGATGCCATCAAGAAGAGCAAGAGTT
ACATCGAGCTGCGGAAGATCGAGAACGCCCGCCAAATCGCCCAGATCCTG
CAGGAGAACGGTGGCCGGAACAAGCTGTACCTGGACAGCCAGGGATTGGG
CCTGAACGTCAACGCGGGCTCCGACGACACGAAATAAGAACTCACCTTCG
GATTCCCTGGATCGAAACTCCTATTATCTATGATGTCCGCGCAAAGCCGC
GCAATATTGCTTCCCTTACCGGTACCAAGGACTTGCAGATGGTGAACATC
ACCTGCCGTGTCCTGTCCAGACCCCGTGTGGACGCCCTCCCCCAAATATA
CCGTACCCTGGGACAGGACTTTGATGAGCGTGTGCTCCCTTCGATTGTGA
ACGAGGTCTTGAAGAGTGTGGTGGCACAATTCAACGCCAGTCAGTTGATC
ACTCAGCGTGAGAACGTTGCCCGCCTGGTCCGGGAGAACCTTGCTCGTCG
GGCTGCTCGCTTCAACATTGCCTTGGACGATGTGTCGCTTACGTTGATGG
TGGTCACCGTGCGATCAAGTACTCCAGAGTAGGTGGTGTCAAGAAGGAAA
TCTACAGTGAAGATGTCCGGGAACCCCAGGGATCAGTTGTACAAGCTCCA
GATGGCCCTCCAAAACCGCCGCGGCGGTTTTGGTGGCGGCTTCGGTGGTG
GTAATCCTCGCGCCGGCATGGGTCTCGCTACTTTGCTCCTCACTGGACTT
GGAGTATATGCTGTTTCCAACTCGCTGTTCAACG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PHB2CAN33_33800Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_33800-T1CAN33_33800-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_33800-T1.cdsCAN33_33800-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_33800-T1.exon4CAN33_33800-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_33800-T1.exon3CAN33_33800-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_33800-T1.exon2CAN33_33800-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_33800-T1.exon1CAN33_33800-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR036013
DBxrefInterPro:IPR001107
DBxrefInterPro:IPR000163
DBxrefPFAM:PF01145
Product subunit of the prohibitin complex (Phb1p-Phb2p)
ProductProhibitin-2
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000007.1supercontigNKJJ01000007.1:607900..608986 -
Powered by Drupal