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CAN33_33870-T1, CAN33_33870-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_33870-T1
Unique NameCAN33_33870-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000007.1:649029..651572-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_33870-T1 ID=CAN33_33870-T1|Name=CAN33_33870-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2544bp|location=Sequence derived from alignment at NKJJ01000007.1:649029..651572- (Aspergillus niger FDAARGOS_311)
ATGCCGGAGAGGGTCCGTACCGTTTTTAATGACGAGGGCGACGCCGTCCC
CGCCCCTAGCAAACCGTCGTCGCAAAAAGCCGAACAAGGCGACTCCGCAC
CCGTCACGAAGCGAAAGGTCCACAGCAAGGAAGACGACCACAAGCGGAAG
AACAAGAAGCGGAAGCATGAGAATGGATTTATCGTGAAGGGGGACAAGCC
CGAGAATCTCAACATGGAGGCACCCCCTCAGCCTGAGCAGAACGGAACCG
GCCCCGGGTCGGACGACAAGCCAGCGATCAAGAAGCAGAAACAAGAAGAA
TCACAACCGCAGAAGCCAATGAAGGATGGAAAACGAAAAGATAAGCATCA
GAAATCCAAAAACACCAATTTCACGCCGCTACGAGAAAAGGCGCAAGCGT
TATACCAACAACGCAAGAACCTCCCTATCTTCCCTCATGGCGATGAGATC
CGCGGCCACTTGCGCAAGAACGATGTGATGCTGTTGGTTGGTGAGACGGG
TAGCGGAAAGAGTACACAGATTCCTCAGTTTCTGGTTAATGAGAAATGGT
GTCGGACGGCTAAGACGGTTGTGCGGGACAGTGATGGTGCGGAGAAGGAG
ATTCCTGTTGGAGGGTGTATTGCCATCACGCAGCCTAGACGAGTGGCGGC
GATTTCGCTGGCGAGACGTGTGGCAGAGGAAATGGGGACTCCGTTGGGAA
ATTCATCGCCTGCGAGTAAAGTTGGGTATTCGGTTCGGTTTGATACGTCG
ACGTCGCCGAGTACGCAGGTCAAATTTTTGACGGAGGGAATGCTGTTGCA
GGAGATGCTGCATGATCCGTGGTTGACGAAGTATAGTGCTATTGTGGTGG
ATGAAGTGCACGAGCGTGGTGTCAATGTTGATCAGGTGCTGGGTTTTCTG
AGGAACTTGGTGTCGGGGAAGAGGGAAGGACGGGGTGGTGTGCCTTTGAA
GGTCGTGGTGATGAGTGCTACGGCGGATATGGAGAGTCTGATGGGCTTCT
TCAAGGAAGGGTTCCAGGGTAGTCCCCGTGCGATTGAAGCAGCGAAGAAG
GAGACAAATGGAGATTCGGCAGACCAGAAGAGTGAGGATGATATTGCTGT
GTGCCATATCAAGGGACGTCAGTTCCCCGTCAAAACGATCTACTCTCCCG
AACCAGTGCATGACTTTGTTGATGCGGCTCTCAAGGTCATCTTCCAGATC
CATTACAAGGAGCCGTGCCCTGGTGACATCCTGGTCTTCCTGACTGGTCA
AGAGACAGTGGAGGCCTTGGAGAACCTCGTCAACGAGTACGCAACCGGGA
TGGATCCGGCGCTGCCCAAGATCCAAGTACTCCCACTCTTCGCAGCGCTC
CCTCAAGCAGCTCAACAGCGAGTGTTCGTCCCTGCTCCCCCACGGACCCG
CAAGATCATCCTCGCTACAAACATCGCGGAAACCTCTGTGACAGTCTCAG
GAGTGCGATTTGTGGTGGACTGCGGAAAGGCCAAGGTCAAGCAATTCCGC
TCCCGTCTCGGACTAGACTCGTTGCTCGTCAAGCCCATCTCCAAGTCAGC
CGCAATCCAGCGTAAGGGTCGTGCCGGTCGAGAAGCCCCGGGTCAGTGCT
ATCGACTCTACACAGAGAAAGATTACCTAGCTCTGGATGAGGTCAACACG
CCAGAGATCCTACGCTGCGACATCAGTCAAGCCCTGCTCAACATGAAAGC
CCGTGGTGTGGACGACATTATGAACTTTCCCTTCCTGACACGGCCCCCGC
GCGAGGCACTGGAGATGGCACTGCTCCAGCTCCTGAGCATTGAAGCCCTA
GAGGAAACCGGCAAGATCAGCCAAATCGGATTGCAGATCGCCAAGCTACC
TCTTACCCCGACACTGGGTCGTGTGCTTCTCGCAGCTTCAGAATACGGCC
CAGAATGCTTGTTAGACGTGATTGACATCATCTCCTGTCTCAGTGTCGAG
AACATCTTCCTGAACATCACATCAGAGGAAAAGAAAGAAGAAGCCGAAGT
AGCGCGCCGGGATCTCTACAGACGAGAGGGCGACCACCTCACCATGCTCG
CTACAGTACAGGCCTACGCAGCAGAGAATACCGATAGAAAGGCATGGGCT
GAGCGGCATCTGGTCTCCCACCGGGCCATGCAATCCGTAATGGTAAGACT
ACCTTCCACCCACTCTTTCTAGTAACCCACAACTAACAAGAAATTCATAC
AGGACGTCCGCAAACAACTCACAACCCAATGCCGCCAAGCCAAGCTTCTC
CCTAACGACGCCCGTGGCTCAGCCGCAAGCACATCCGTCCGTGACCCCTC
ACCCATCCACATCCTGAAGAGTTTCCTGCGCGGGTTCTCGACGAACACGG
CGCGTCTGGTGCCGGATGGTAGCTACCGCACGGTGGTGGGTAACCAGACG
GTGGCGATTCATCCGTCTAGTGTGCTGTTTGGAAAGAAGGTCGAAGCGAT
CATGTATAATGAATTTGTGTTTACGAACCGCAGTTATGCGCGGGGTGTGA
GTGCGGTGCAGATGGATTGGGTGGGGGAGGCGCTGGCTGGGTAG
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Coding sequence (CDS) from alignment at NKJJ01000007.1:649029..651572-

>CAN33_33870-T1 ID=CAN33_33870-T1|Name=CAN33_33870-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=4968bp|location=Sequence derived from alignment at NKJJ01000007.1:649029..651572- (Aspergillus niger FDAARGOS_311)
GACGTCCGCAAACAACTCACAACCCAATGCCGCCAAGCCAAGCTTCTCCC
TAACGACGCCCGTGGCTCAGCCGCAAGCACATCCGTCCGTGACCCCTCAC
CCATCCACATCCTGAAGAGTTTCCTGCGCGGGTTCTCGACGAACACGGCG
CGTCTGGTGCCGGATGGTAGCTACCGCACGGTGGTGGGTAACCAGACGGT
GGCGATTCATCCGTCTAGTGTGCTGTTTGGAAAGAAGGTCGAAGCGATCA
TGTATAATGAATTTGTGTTTACGAACCGCAGTTATGCGCGGGGTGTGAGT
GCGGTGCAGATGGATTGGGTGGGGGAGGCGCTGGCTGGGTAGATGCCGGA
GAGGGTCCGTACCGTTTTTAATGACGAGGGCGACGCCGTCCCCGCCCCTA
GCAAACCGTCGTCGCAAAAAGCCGAACAAGGCGACTCCGCACCCGTCACG
AAGCGAAAGGTCCACAGCAAGGAAGACGACCACAAGCGGAAGAACAAGAA
GCGGAAGCATGAGAATGGATTTATCGTGAAGGGGGACAAGCCCGAGAATC
TCAACATGGAGGCACCCCCTCAGCCTGAGCAGAACGGAACCGGCCCCGGG
TCGGACGACAAGCCAGCGATCAAGAAGCAGAAACAAGAAGAATCACAACC
GCAGAAGCCAATGAAGGATGGAAAACGAAAAGATAAGCATCAGAAATCCA
AAAACACCAATTTCACGCCGCTACGAGAAAAGGCGCAAGCGTTATACCAA
CAACGCAAGAACCTCCCTATCTTCCCTCATGGCGATGAGATCCGCGGCCA
CTTGCGCAAGAACGATGTGATGCTGTTGGTTGGTGAGACGGGTAGCGGAA
AGAGTACACAGATTCCTCAGTTTCTGGTTAATGAGAAATGGTGTCGGACG
GCTAAGACGGTTGTGCGGGACAGTGATGGTGCGGAGAAGGAGATTCCTGT
TGGAGGGTGTATTGCCATCACGCAGCCTAGACGAGTGGCGGCGATTTCGC
TGGCGAGACGTGTGGCAGAGGAAATGGGGACTCCGTTGGGAAATTCATCG
CCTGCGAGTAAAGTTGGGTATTCGGTTCGGTTTGATACGTCGACGTCGCC
GAGTACGCAGGTCAAATTTTTGACGGAGGGAATGCTGTTGCAGGAGATGC
TGCATGATCCGTGGTTGACGAAGTATAGTGCTATTGTGGTGGATGAAGTG
CACGAGCGTGGTGTCAATGTTGATCAGGTGCTGGGTTTTCTGAGGAACTT
GGTGTCGGGGAAGAGGGAAGGACGGGGTGGTGTGCCTTTGAAGGTCGTGG
TGATGAGTGCTACGGCGGATATGGAGAGTCTGATGGGCTTCTTCAAGGAA
GGGTTCCAGGGTAGTCCCCGTGCGATTGAAGCAGCGAAGAAGGAGACAAA
TGGAGATTCGGCAGACCAGAAGAGTGAGGATGATATTGCTGTGTGCCATA
TCAAGGGACGTCAGTTCCCCGTCAAAACGATCTACTCTCCCGAACCAGTG
CATGACTTTGTTGATGCGGCTCTCAAGGTCATCTTCCAGATCCATTACAA
GGAGCCGTGCCCTGGTGACATCCTGGTCTTCCTGACTGGTCAAGAGACAG
TGGAGGCCTTGGAGAACCTCGTCAACGAGTACGCAACCGGGATGGATCCG
GCGCTGCCCAAGATCCAAGTACTCCCACTCTTCGCAGCGCTCCCTCAAGC
AGCTCAACAGCGAGTGTTCGTCCCTGCTCCCCCACGGACCCGCAAGATCA
TCCTCGCTACAAACATCGCGGAAACCTCTGTGACAGTCTCAGGAGTGCGA
TTTGTGGTGGACTGCGGAAAGGCCAAGGTCAAGCAATTCCGCTCCCGTCT
CGGACTAGACTCGTTGCTCGTCAAGCCCATCTCCAAGTCAGCCGCAATCC
AGCGTAAGGGTCGTGCCGGTCGAGAAGCCCCGGGTCAGTGCTATCGACTC
TACACAGAGAAAGATTACCTAGCTCTGGATGAGGTCAACACGCCAGAGAT
CCTACGCTGCGACATCAGTCAAGCCCTGCTCAACATGAAAGCCCGTGGTG
TGGACGACATTATGAACTTTCCCTTCCTGACACGGCCCCCGCGCGAGGCA
CTGGAGATGGCACTGCTCCAGCTCCTGAGCATTGAAGCCCTAGAGGAAAC
CGGCAAGATCAGCCAAATCGGATTGCAGATCGCCAAGCTACCTCTTACCC
CGACACTGGGTCGTGTGCTTCTCGCAGCTTCAGAATACGGCCCAGAATGC
TTGTTAGACGTGATTGACATCATCTCCTGTCTCAGTGTCGAGAACATCTT
CCTGAACATCACATCAGAGGAAAAGAAAGAAGAAGCCGAAGTAGCGCGCC
GGGATCTCTACAGACGAGAGGGCGACCACCTCACCATGCTCGCTACAGTA
CAGGCCTACGCAGCAGAGAATACCGATAGAAAGGCATGGGCTGAGCGGCA
TCTGGTCTCCCACCGGGCCATGCAATCCGTAATGGACGTCCGCAAACAAC
TCACAACCCAATGCCGCCAAGCCAAGCTTCTCCCTAACGACGCCCGTGGC
TCAGCCGCAAGCACATCCGTCCGTGACCCCTCACCCATCCACATCCTGAA
GAGTTTCCTGCGCGGGTTCTCGACGAACACGGCGCGTCTGGTGCCGGATG
GTAGCTACCGCACGGTGGTGGGTAACCAGACGGTGGCGATTCATCCGTCT
AGTGTGCTGTTTGGAAAGAAGGTCGAAGCGATCATGTATAATGAATTTGT
GTTTACGAACCGCAGTTATGCGCGGGGTGTGAGTGCGGTGCAGATGGATT
GGGTGGGGGAGGCGCTGGCTGGGTAGATGCCGGAGAGGGTCCGTACCGTT
TTTAATGACGAGGGCGACGCCGTCCCCGCCCCTAGCAAACCGTCGTCGCA
AAAAGCCGAACAAGGCGACTCCGCACCCGTCACGAAGCGAAAGGTCCACA
GCAAGGAAGACGACCACAAGCGGAAGAACAAGAAGCGGAAGCATGAGAAT
GGATTTATCGTGAAGGGGGACAAGCCCGAGAATCTCAACATGGAGGCACC
CCCTCAGCCTGAGCAGAACGGAACCGGCCCCGGGTCGGACGACAAGCCAG
CGATCAAGAAGCAGAAACAAGAAGAATCACAACCGCAGAAGCCAATGAAG
GATGGAAAACGAAAAGATAAGCATCAGAAATCCAAAAACACCAATTTCAC
GCCGCTACGAGAAAAGGCGCAAGCGTTATACCAACAACGCAAGAACCTCC
CTATCTTCCCTCATGGCGATGAGATCCGCGGCCACTTGCGCAAGAACGAT
GTGATGCTGTTGGTTGGTGAGACGGGTAGCGGAAAGAGTACACAGATTCC
TCAGTTTCTGGTTAATGAGAAATGGTGTCGGACGGCTAAGACGGTTGTGC
GGGACAGTGATGGTGCGGAGAAGGAGATTCCTGTTGGAGGGTGTATTGCC
ATCACGCAGCCTAGACGAGTGGCGGCGATTTCGCTGGCGAGACGTGTGGC
AGAGGAAATGGGGACTCCGTTGGGAAATTCATCGCCTGCGAGTAAAGTTG
GGTATTCGGTTCGGTTTGATACGTCGACGTCGCCGAGTACGCAGGTCAAA
TTTTTGACGGAGGGAATGCTGTTGCAGGAGATGCTGCATGATCCGTGGTT
GACGAAGTATAGTGCTATTGTGGTGGATGAAGTGCACGAGCGTGGTGTCA
ATGTTGATCAGGTGCTGGGTTTTCTGAGGAACTTGGTGTCGGGGAAGAGG
GAAGGACGGGGTGGTGTGCCTTTGAAGGTCGTGGTGATGAGTGCTACGGC
GGATATGGAGAGTCTGATGGGCTTCTTCAAGGAAGGGTTCCAGGGTAGTC
CCCGTGCGATTGAAGCAGCGAAGAAGGAGACAAATGGAGATTCGGCAGAC
CAGAAGAGTGAGGATGATATTGCTGTGTGCCATATCAAGGGACGTCAGTT
CCCCGTCAAAACGATCTACTCTCCCGAACCAGTGCATGACTTTGTTGATG
CGGCTCTCAAGGTCATCTTCCAGATCCATTACAAGGAGCCGTGCCCTGGT
GACATCCTGGTCTTCCTGACTGGTCAAGAGACAGTGGAGGCCTTGGAGAA
CCTCGTCAACGAGTACGCAACCGGGATGGATCCGGCGCTGCCCAAGATCC
AAGTACTCCCACTCTTCGCAGCGCTCCCTCAAGCAGCTCAACAGCGAGTG
TTCGTCCCTGCTCCCCCACGGACCCGCAAGATCATCCTCGCTACAAACAT
CGCGGAAACCTCTGTGACAGTCTCAGGAGTGCGATTTGTGGTGGACTGCG
GAAAGGCCAAGGTCAAGCAATTCCGCTCCCGTCTCGGACTAGACTCGTTG
CTCGTCAAGCCCATCTCCAAGTCAGCCGCAATCCAGCGTAAGGGTCGTGC
CGGTCGAGAAGCCCCGGGTCAGTGCTATCGACTCTACACAGAGAAAGATT
ACCTAGCTCTGGATGAGGTCAACACGCCAGAGATCCTACGCTGCGACATC
AGTCAAGCCCTGCTCAACATGAAAGCCCGTGGTGTGGACGACATTATGAA
CTTTCCCTTCCTGACACGGCCCCCGCGCGAGGCACTGGAGATGGCACTGC
TCCAGCTCCTGAGCATTGAAGCCCTAGAGGAAACCGGCAAGATCAGCCAA
ATCGGATTGCAGATCGCCAAGCTACCTCTTACCCCGACACTGGGTCGTGT
GCTTCTCGCAGCTTCAGAATACGGCCCAGAATGCTTGTTAGACGTGATTG
ACATCATCTCCTGTCTCAGTGTCGAGAACATCTTCCTGAACATCACATCA
GAGGAAAAGAAAGAAGAAGCCGAAGTAGCGCGCCGGGATCTCTACAGACG
AGAGGGCGACCACCTCACCATGCTCGCTACAGTACAGGCCTACGCAGCAG
AGAATACCGATAGAAAGGCATGGGCTGAGCGGCATCTGGTCTCCCACCGG
GCCATGCAATCCGTAATG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0004386helicase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_33870CAN33_33870Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_33870-T1CAN33_33870-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_33870-T1.cdsCAN33_33870-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_33870-T1.exon2CAN33_33870-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_33870-T1.exon1CAN33_33870-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR002464
DBxrefInterPro:IPR011709
DBxrefInterPro:IPR001650
DBxrefInterPro:IPR014001
DBxrefInterPro:IPR007502
DBxrefPFAM:PF07717
DBxrefPFAM:PF00271
DBxrefPFAM:PF04408
ProductOligonucleotide/oligosaccharide-binding (OB)-fold family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000007.1supercontigNKJJ01000007.1:649029..651572 -
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