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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000007.1:696072..697928+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_33935-T1 ID=CAN33_33935-T1|Name=CAN33_33935-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1857bp|location=Sequence derived from alignment at NKJJ01000007.1:696072..697928+ (Aspergillus niger FDAARGOS_311)
ATGACTTCCTACCAGCCATTCCAATGCATGGTTTGTCTACGCCGTTTCAC
TCGACATGAGAACCTCAAACGACACGCAGCACTTCATTCCCGCTCTCGAA
AGGAAATCACCTTGCCGTGTGACTTGTGCCAGGCTACCTTTTCGCGTCCG
GACTTGCGCCATCGCCATATGAAGAGGAAACATGCAGAGCACGAGCAAAG
ACGAGCGACGAAGAGGCCAAAGCAAAGGGATAGCTATGCTACCCTATGCC
AGGATACTGGCCAGCATCGTGGGCAACTGCAGAATGTCGATGACCTGCAG
TTAGATAGGTCTTGTTGGACGTCTGATCTTTCGCAAATACACTACGAGGA
TGGACATGACCCAGATGCAGGAGGAACCAGCACTGCGTCCAGCACATCAC
CCATAGAAAACAGCGATCGTATCCAGTCTGTTCCAGGTAATCCGACGCAA
CATATACCAATGGACGAGTCTCGTTTGCTAGATGCGTTAGAACTGGAGCG
TAGCCTGTTACGCGAAACATCACTTCCCCAACCAACCGATCAACTCAGCA
CCCAGCCGCTCGCGATATCCAATCTACAGTCTCCGTCGGACATTGACCTC
GGCGACCTCAGCTTTCCCAAAGATCTCTCTGTTATCCCTATTGCGCCCGA
GAGCACCCAGCCCCAAAACAGCTGGTTTCCTTCCGCCTCACAAATCCGCG
AGGGCTGCAGCTTATTCTTCACCCATGTCTCGCACTTTCTTCCATTTCTA
CACCACCCAACATTCGACCCCAGTGCCATACCCTCCCACCTCCTCCTCGC
CATGCTCTCCCTCTCATACCAATACGGCGAAGACCCGGAATGCGATGCCC
GCACGGGCACGGGCACAAGCCTCTCCACCCGCTGCTACCTCCGCGCCCGC
TCCAGCCTCTCCTCCAGCAACCACCCTAACTCTACCATCACCGACCACCT
CTCCCTAGTGCAAACCTACCTCCTCCTCCAAATCTGCGCCATGATGTACC
TCTGCGGCTCCGACTCGACCCAAGGCCTCCAAATGCACGCGACCATGATA
TCCCTCGCGCGCTCCACAGGCCTCATGCAGCCCATAACCACCGAATGTGC
ACACACCTTGGACCTCGACTCCCTGTGGAAAGAATTCATCAAAGCCGAAT
CCCACAAACGGACCCTCTTCGCCGTTCACCAAATCGACGCACTCTGGTAC
CAACTCCTCTCCATCCCACGCGCCATCTCCCACCTCGAAATCAAACACGA
TCTGCCCTGTCCAGAAACCCACTGGACCGCCCCCTCCGCCGCCCAATGGG
CCCATCTCCAACTCATCTCCCAACAACAACATCATAAACACCCAACCAGT
ATGCGCTACGACGACGCAGTCCGGCACTTCCTCTCCTCATCTACAGATTC
CACATCTTCGATCCCCCCCTTCGACCCCTACGGCGCCATCAACATCACCC
ACTTCCTGATCTCCAGCGCGCGCGAAATCTCCGGCTGGTCTACCATGACC
GGCATGCTGAGCATGGAACGGTTCTCCGCTCTACGGTCGTCTCTCCTGTC
TTTGGGAGTGTTTCTTTCCCCAACACCAACACCAACACCGACGCCCTCTA
CTACCTATAACGCTAAATCCGCCCACACCACCGCAACCTGGCAAACAGCC
ATGATCGAGCTACAGATGTGGTCTCCCAGCCACACAGGCGGCATCGTCAA
AGCCAGTATCGACACCATGCTCCAGCAGGCGACGGAGTTGGCGCCCTCGG
CGTGTGAGTTCCTGTGTGAGGAGACAGCGAAGGCGTTCCAGCCGCATGTG
GATTGGTTTCTGACCTATTTGGAGGAGGGGATGTGGAGGGAGAGGCGCCG
TGGGTGA back to topCoding sequence (CDS) from alignment at NKJJ01000007.1:696072..697928+ >CAN33_33935-T1 ID=CAN33_33935-T1|Name=CAN33_33935-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1857bp|location=Sequence derived from alignment at NKJJ01000007.1:696072..697928+ (Aspergillus niger FDAARGOS_311)
ATGACTTCCTACCAGCCATTCCAATGCATGGTTTGTCTACGCCGTTTCAC
TCGACATGAGAACCTCAAACGACACGCAGCACTTCATTCCCGCTCTCGAA
AGGAAATCACCTTGCCGTGTGACTTGTGCCAGGCTACCTTTTCGCGTCCG
GACTTGCGCCATCGCCATATGAAGAGGAAACATGCAGAGCACGAGCAAAG
ACGAGCGACGAAGAGGCCAAAGCAAAGGGATAGCTATGCTACCCTATGCC
AGGATACTGGCCAGCATCGTGGGCAACTGCAGAATGTCGATGACCTGCAG
TTAGATAGGTCTTGTTGGACGTCTGATCTTTCGCAAATACACTACGAGGA
TGGACATGACCCAGATGCAGGAGGAACCAGCACTGCGTCCAGCACATCAC
CCATAGAAAACAGCGATCGTATCCAGTCTGTTCCAGGTAATCCGACGCAA
CATATACCAATGGACGAGTCTCGTTTGCTAGATGCGTTAGAACTGGAGCG
TAGCCTGTTACGCGAAACATCACTTCCCCAACCAACCGATCAACTCAGCA
CCCAGCCGCTCGCGATATCCAATCTACAGTCTCCGTCGGACATTGACCTC
GGCGACCTCAGCTTTCCCAAAGATCTCTCTGTTATCCCTATTGCGCCCGA
GAGCACCCAGCCCCAAAACAGCTGGTTTCCTTCCGCCTCACAAATCCGCG
AGGGCTGCAGCTTATTCTTCACCCATGTCTCGCACTTTCTTCCATTTCTA
CACCACCCAACATTCGACCCCAGTGCCATACCCTCCCACCTCCTCCTCGC
CATGCTCTCCCTCTCATACCAATACGGCGAAGACCCGGAATGCGATGCCC
GCACGGGCACGGGCACAAGCCTCTCCACCCGCTGCTACCTCCGCGCCCGC
TCCAGCCTCTCCTCCAGCAACCACCCTAACTCTACCATCACCGACCACCT
CTCCCTAGTGCAAACCTACCTCCTCCTCCAAATCTGCGCCATGATGTACC
TCTGCGGCTCCGACTCGACCCAAGGCCTCCAAATGCACGCGACCATGATA
TCCCTCGCGCGCTCCACAGGCCTCATGCAGCCCATAACCACCGAATGTGC
ACACACCTTGGACCTCGACTCCCTGTGGAAAGAATTCATCAAAGCCGAAT
CCCACAAACGGACCCTCTTCGCCGTTCACCAAATCGACGCACTCTGGTAC
CAACTCCTCTCCATCCCACGCGCCATCTCCCACCTCGAAATCAAACACGA
TCTGCCCTGTCCAGAAACCCACTGGACCGCCCCCTCCGCCGCCCAATGGG
CCCATCTCCAACTCATCTCCCAACAACAACATCATAAACACCCAACCAGT
ATGCGCTACGACGACGCAGTCCGGCACTTCCTCTCCTCATCTACAGATTC
CACATCTTCGATCCCCCCCTTCGACCCCTACGGCGCCATCAACATCACCC
ACTTCCTGATCTCCAGCGCGCGCGAAATCTCCGGCTGGTCTACCATGACC
GGCATGCTGAGCATGGAACGGTTCTCCGCTCTACGGTCGTCTCTCCTGTC
TTTGGGAGTGTTTCTTTCCCCAACACCAACACCAACACCGACGCCCTCTA
CTACCTATAACGCTAAATCCGCCCACACCACCGCAACCTGGCAAACAGCC
ATGATCGAGCTACAGATGTGGTCTCCCAGCCACACAGGCGGCATCGTCAA
AGCCAGTATCGACACCATGCTCCAGCAGGCGACGGAGTTGGCGCCCTCGG
CGTGTGAGTTCCTGTGTGAGGAGACAGCGAAGGCGTTCCAGCCGCATGTG
GATTGGTTTCTGACCTATTTGGAGGAGGGGATGTGGAGGGAGAGGCGCCG
TGGGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006351 | transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003677 | DNA binding |
| GO:0008270 | zinc ion binding |
| GO:0003676 | nucleic acid binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036236 |
| DBxref | InterPro:IPR007219 |
| DBxref | InterPro:IPR013087 |
| DBxref | PFAM:PF04082 |
| Product | Fungal specific transcription factor domain family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000007.1 | supercontig | NKJJ01000007.1:696072..697928 + |
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