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CAN33_3395-T1, CAN33_3395-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_3395-T1
Unique NameCAN33_3395-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000004.1:2172136..2173462+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_3395-T1 ID=CAN33_3395-T1|Name=CAN33_3395-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1327bp|location=Sequence derived from alignment at NKJJ01000004.1:2172136..2173462+ (Aspergillus niger FDAARGOS_311)
ATGTTCGACACCGTTTGCACCCTTCCGCTATCAGCGGACCTGTTCTCCCA
GGCCCTGCATCCCAAGGAGCCCGTCGTGTCCGTTGGTCTCTCCTCCGGGC
ATGTCCAGACGTTCCGACTCCCCACCGACGAAGCGGCCAGCGACGACGAC
GAGACATCAAATGCCTCGTCACGCAATGGCAGAGGACACATTGATACGAT
GTGGCGGACGAGACGCCATAAGGGTAGCTGCCGGTGCTTGACGTTTGGAA
TTGATGGCGAGACGCTCTATTCGGCCGGCACGGACGGGCTGATCAAGGCC
GCAAAGGCGGAGACGGGAGTCGTGGAAAACAAGATCGCTATTCCTACAGA
AAAGAATGGGTAGGAGATAAGCCCCTTTTATATGTGCTTGAAGGGAGGAG
AGGACTCAATGGCTCATTGTATTCGCTTTTAGATCCATCGATGCTCCCAC
CATCATTCATGCGCTTTCCCCTCAGACCCTCCTTCTTGCGACCGATTCCA
GCGCCCTCCACCTCTACGATCTCCGCATACCCTACTCCAAGGTTTCCGCG
AAGCCTGAACAATCTCATCACCCTCACGACGACTACGTTTCGTCGCTTAC
GCCTCTTCCGGCCTCTGATACTAGCACCTCGGGGTTCAGCAAGCAATGGG
TGACGACGGGTGGGACGACCCTGGCAGTTACAGATTTGCGACGGGGTGTG
CTTGTTCGCAGCGAGGATCAGGAAGAGGAGTTGATCAGTTCGACGTACAT
TGGCGGATTGGCGGCCAGTGGCACGAGTCGCGGCGAGAAGGTGCTTGTGG
GGGGTTCTGGCGGTGTCCTTACGCTTTGGGAGAAGGGCGCGTGGGATGAC
CAGGACGAGCGGATCTATGTGGAGCGTGGAGGAGGTGGTGGAGAGTCCCT
GGAGACCATGGCTGTTCTGCCGGATGAATTGGGTAAGGGCAAGGTGGTCG
CTGTTGGTCTGGGCAATGGTCGGGTCAAGTTTGTGCGGATCGGCGCTAAC
AAGGTTGCCGCGGAGGTTATGCATGATGAGACTGAGGGCGTGATTGGCCT
GGGCTTTGACGTTGAGGGGCGCATGGTTACTGGTGGTGGACAGGTGGTGA
AGGTTTGGCATGAGGCTGTTGTTGGCGCTGATAGGTACGGGGCGATGCCG
GGGGAGAAGCGCATGTACGGAGACAGTGACGATAGCGATGAAGGTGACGA
CAGTGATGATGACTCGGATGATAGCGATGCCGGTGGCCGCCAGGACAAGC
CGCAGAACAAGCGCAAGAAGACAAAAGCCAAGGGCAAGGGTGGGCAGCAA
ATTATGGCTTTCCATGACTTGGATTAA
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Coding sequence (CDS) from alignment at NKJJ01000004.1:2172136..2173462+

>CAN33_3395-T1 ID=CAN33_3395-T1|Name=CAN33_3395-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2508bp|location=Sequence derived from alignment at NKJJ01000004.1:2172136..2173462+ (Aspergillus niger FDAARGOS_311)
ATGTTCGACACCGTTTGCACCCTTCCGCTATCAGCGGACCTGTTCTCCCA
GGCCCTGCATCCCAAGGAGCCCGTCGTGTCCGTTGGTCTCTCCTCCGGGC
ATGTCCAGACGTTCCGACTCCCCACCGACGAAGCGGCCAGCGACGACGAC
GAGACATCAAATGCCTCGTCACGCAATGGCAGAGGACACATTGATACGAT
GTGGCGGACGAGACGCCATAAGGGTAGCTGCCGGTGCTTGACGTTTGGAA
TTGATGGCGAGACGCTCTATTCGGCCGGCACGGACGGGCTGATCAAGGCC
GCAAAGGCGGAGACGGGAGTCGTGGAAAACAAGATCGCTATTCCTACAGA
AAAGAATGGATCCATCGATGCTCCCACCATCATTCATGCGCTTTCCCCTC
AGACCCTCCTTCTTGCGACCGATTCCAGCGCCCTCCACCTCTACGATCTC
CGCATACCCTACTCCAAGGTTTCCGCGAAGCCTGAACAATCTCATCACCC
TCACGACGACTACGTTTCGTCGCTTACGCCTCTTCCGGCCTCTGATACTA
GCACCTCGGGGTTCAGCAAGCAATGGGTGACGACGGGTGGGACGACCCTG
GCAGTTACAGATTTGCGACGGGGTGTGCTTGTTCGCAGCGAGGATCAGGA
AGAGGAGTTGATCAGTTCGACGTACATTGGCGGATTGGCGGCCAGTGGCA
CGAGTCGCGGCGAGAAGGTGCTTGTGGGGGGTTCTGGCGGTGTCCTTACG
CTTTGGGAGAAGGGCGCGTGGGATGACCAGGACGAGCGGATCTATGTGGA
GCGTGGAGGAGGTGGTGGAGAGTCCCTGGAGACCATGGCTGTTCTGCCGG
ATGAATTGGGTAAGGGCAAGGTGGTCGCTGTTGGTCTGGGCAATGGTCGG
GTCAAGTTTGTGCGGATCGGCGCTAACAAGGTTGCCGCGGAGGTTATGCA
TGATGAGACTGAGGGCGTGATTGGCCTGGGCTTTGACGTTGAGGGGCGCA
TGGTTACTGGTGGTGGACAGGTGGTGAAGGTTTGGCATGAGGCTGTTGTT
GGCGCTGATAGGTACGGGGCGATGCCGGGGGAGAAGCGCATGTACGGAGA
CAGTGACGATAGCGATGAAGGTGACGACAGTGATGATGACTCGGATGATA
GCGATGCCGGTGGCCGCCAGGACAAGCCGCAGAACAAGCGCAAGAAGACA
AAAGCCAAGGGCAAGGGTGGGCAGCAAATTATGGCTTTCCATGACTTGGA
TTAAATGTTCGACACCGTTTGCACCCTTCCGCTATCAGCGGACCTGTTCT
CCCAGGCCCTGCATCCCAAGGAGCCCGTCGTGTCCGTTGGTCTCTCCTCC
GGGCATGTCCAGACGTTCCGACTCCCCACCGACGAAGCGGCCAGCGACGA
CGACGAGACATCAAATGCCTCGTCACGCAATGGCAGAGGACACATTGATA
CGATGTGGCGGACGAGACGCCATAAGGGTAGCTGCCGGTGCTTGACGTTT
GGAATTGATGGCGAGACGCTCTATTCGGCCGGCACGGACGGGCTGATCAA
GGCCGCAAAGGCGGAGACGGGAGTCGTGGAAAACAAGATCGCTATTCCTA
CAGAAAAGAATGGATCCATCGATGCTCCCACCATCATTCATGCGCTTTCC
CCTCAGACCCTCCTTCTTGCGACCGATTCCAGCGCCCTCCACCTCTACGA
TCTCCGCATACCCTACTCCAAGGTTTCCGCGAAGCCTGAACAATCTCATC
ACCCTCACGACGACTACGTTTCGTCGCTTACGCCTCTTCCGGCCTCTGAT
ACTAGCACCTCGGGGTTCAGCAAGCAATGGGTGACGACGGGTGGGACGAC
CCTGGCAGTTACAGATTTGCGACGGGGTGTGCTTGTTCGCAGCGAGGATC
AGGAAGAGGAGTTGATCAGTTCGACGTACATTGGCGGATTGGCGGCCAGT
GGCACGAGTCGCGGCGAGAAGGTGCTTGTGGGGGGTTCTGGCGGTGTCCT
TACGCTTTGGGAGAAGGGCGCGTGGGATGACCAGGACGAGCGGATCTATG
TGGAGCGTGGAGGAGGTGGTGGAGAGTCCCTGGAGACCATGGCTGTTCTG
CCGGATGAATTGGGTAAGGGCAAGGTGGTCGCTGTTGGTCTGGGCAATGG
TCGGGTCAAGTTTGTGCGGATCGGCGCTAACAAGGTTGCCGCGGAGGTTA
TGCATGATGAGACTGAGGGCGTGATTGGCCTGGGCTTTGACGTTGAGGGG
CGCATGGTTACTGGTGGTGGACAGGTGGTGAAGGTTTGGCATGAGGCTGT
TGTTGGCGCTGATAGGTACGGGGCGATGCCGGGGGAGAAGCGCATGTACG
GAGACAGTGACGATAGCGATGAAGGTGACGACAGTGATGATGACTCGGAT
GATAGCGATGCCGGTGGCCGCCAGGACAAGCCGCAGAACAAGCGCAAGAA
GACAAAAGCCAAGGGCAAGGGTGGGCAGCAAATTATGGCTTTCCATGACT
TGGATTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
JIP5CAN33_3395Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_3395-T1.exon1CAN33_3395-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_3395-T1.exon2CAN33_3395-T1.exon2Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_3395-T1.cdsCAN33_3395-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_3395-T1CAN33_3395-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036322
DBxrefInterPro:IPR015943
ProductWD repeat-containing protein jip5
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000004.1supercontigNKJJ01000004.1:2172136..2173462 +
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