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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000007.1:773064..775103- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_34075-T1 ID=CAN33_34075-T1|Name=CAN33_34075-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2040bp|location=Sequence derived from alignment at NKJJ01000007.1:773064..775103- (Aspergillus niger FDAARGOS_311)
ATGTCTCACGAGCTTCGAGTCCTGCCCCCAGGTGCGGGCTATGGAATCGT
CATCGGCATCGGTGGCATCTTCGCCCTATTCATGCTCGGTATCTCCTGGC
TACAGAATCGCTATACGCAGTTCTCCACCCATCGCGCCGAAGAATTCAAC
ACCGCCTCACGATCCGTCAAGCCGGGCTTGATCTCCGCTGGCATTGTCTC
CTCCTGGACATGGTCAGCTACACTCCTAACCAGTTCGACTTTTGCATATT
CCTATGGTGTCTGCGGACCCATGTGGTACGGTGCTATCGGCACCCTGCAG
ATCCTTCTGTTTGCCCTGATTGCGGTCAAAATCAAAGCCAATGCACCGGG
CGCACACACCATGCCGGAGATTGTCCTCGCTCGACACGGCAAGGTTGCTC
ATCTCACGTACTTGTACAATGGTCTGGCTACGAATATGCTGGTTAGTGCG
TGTTTGGTGCTAGGTGGCGCGCAGGTGGTGGCGGCACTCACGGGGATGAA
TGTGTATGCTGCCAATTTCCTTATTCCTGCCGTAGTCGCGGCGTATGTTA
TCGTCGGTGGATTGCGCGCGACTTTCATCGCGGATTATACTCATACCGTT
ATTCTGTTTATCGCGATATTGGTGTTTGGGTTTTCGGTCTCGGCTACCAG
TGACCTCATTGGAAGCCCTGGAAAGTTGTACGATTTGCTGCAGGAGGCGT
CGCGGAATATGCCGATTGATCGGAATACTGATGGGTCGTATCTTGCGTTT
CGGTCCGTTGGTGGTCTGATCTTCGCGGTTGACATATTTGTCTCTGGGTT
CAGTACTGTCTGGCTCGACCAAGCCTATTGGCAGCGAGCAATTGCGTCGC
GACCTGAATCTTCCGTGAAGGCATACATGCTAGGAGGTGTTGCATGGTAT
GGTGAGTACCAGGGTCTTCAAGAATTCCATGTCTTTTACTGGATACTGAT
AACCTTAGGCATTCCGTTCGGCTTTGCTACGGCCATGGGTCTCGGTTGTG
CGGCTCTTACCAACAACCCAGCCTTTCCCACATACCCCAACCCATTATCA
GCTTCTCAAGTCGACGCCGGACTTTCCGCCCCAGCAACCGCAATCACCCT
CCTAGGGAAAGGCGGCGCCGTGCTCATGCTCATCCTCCTGTTCATGGCAG
TGACTAGTTCCACATCCGCTGAACTCATCGCTGTCTCCTCCCTACTCACC
TTTGATGTGTACAAAACCTACATCCGCCCGAACACCGACTCTGCGACACT
CGTGCGCGTCAGCCACTGGGGCATTGTCATCTATGCCATTATCCTCGCCG
CGTTCTGCAGTATCCTCAATGCTGCAGGCGTCAGCCTCACCTGGTTACTA
ACAGTGCTGGGAGTCATCGTCGGCGGAGCAGCAATTCCCGTGGGACTTAT
TCTGCTCTGGGACCGCATGTCCACTGTTGCGGCTATTGCAGCTCCATGGA
TTGGATTTGGCTTGGGTATCATCGTCTGGTTCATCACTTCGTGGAAGCGA
TCGGGCGGCATCAGTGTTGCGACGACGGGCGATGCCACAAATGCCGTAGC
TGGAAACTTGGCCTCGTTTGGGGTGGGCACTATTTCCGCTGTGCTTTTGA
GCTTGATATTTCCAGGAAAGCGCAGACACGACACGTCGGCAACGAATAGT
ATCACAGGAGTCCCTGTCGAACCAGAGAAGACCTCGACAGAGGCATCAGC
CAAGAAGGATAATGATACCGAAATAGTCACAACAATGGCAACCCCGACTG
ACCCCATCACGCAGCCGAAGAACGATATAATTGAGTACCTCGAAACCGAG
ACCATTGAGCCCATGGATCCTGCTCTGGTTAAGAAGGCGGAGCGATTTGC
TTGGACAGCGAATGCTATTTTTATTGCGATTGCAGTGATACTTGTTCCTT
TCACTTTGTTCGGGACGAGGTATGTGTACAACAGAGAGTTCTTTACGGGG
TGGGTTGTCGTCTCCTTTATTTGGGTCTGGGCGAGTGTGCTCATCTGTGT
GATATATCCGGTGGTAAGTGGTCACGCTTTCGAGAAATGA back to topCoding sequence (CDS) from alignment at NKJJ01000007.1:773064..775103- >CAN33_34075-T1 ID=CAN33_34075-T1|Name=CAN33_34075-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3966bp|location=Sequence derived from alignment at NKJJ01000007.1:773064..775103- (Aspergillus niger FDAARGOS_311)
GCATTCCGTTCGGCTTTGCTACGGCCATGGGTCTCGGTTGTGCGGCTCTT
ACCAACAACCCAGCCTTTCCCACATACCCCAACCCATTATCAGCTTCTCA
AGTCGACGCCGGACTTTCCGCCCCAGCAACCGCAATCACCCTCCTAGGGA
AAGGCGGCGCCGTGCTCATGCTCATCCTCCTGTTCATGGCAGTGACTAGT
TCCACATCCGCTGAACTCATCGCTGTCTCCTCCCTACTCACCTTTGATGT
GTACAAAACCTACATCCGCCCGAACACCGACTCTGCGACACTCGTGCGCG
TCAGCCACTGGGGCATTGTCATCTATGCCATTATCCTCGCCGCGTTCTGC
AGTATCCTCAATGCTGCAGGCGTCAGCCTCACCTGGTTACTAACAGTGCT
GGGAGTCATCGTCGGCGGAGCAGCAATTCCCGTGGGACTTATTCTGCTCT
GGGACCGCATGTCCACTGTTGCGGCTATTGCAGCTCCATGGATTGGATTT
GGCTTGGGTATCATCGTCTGGTTCATCACTTCGTGGAAGCGATCGGGCGG
CATCAGTGTTGCGACGACGGGCGATGCCACAAATGCCGTAGCTGGAAACT
TGGCCTCGTTTGGGGTGGGCACTATTTCCGCTGTGCTTTTGAGCTTGATA
TTTCCAGGAAAGCGCAGACACGACACGTCGGCAACGAATAGTATCACAGG
AGTCCCTGTCGAACCAGAGAAGACCTCGACAGAGGCATCAGCCAAGAAGG
ATAATGATACCGAAATAGTCACAACAATGGCAACCCCGACTGACCCCATC
ACGCAGCCGAAGAACGATATAATTGAGTACCTCGAAACCGAGACCATTGA
GCCCATGGATCCTGCTCTGGTTAAGAAGGCGGAGCGATTTGCTTGGACAG
CGAATGCTATTTTTATTGCGATTGCAGTGATACTTGTTCCTTTCACTTTG
TTCGGGACGAGGTATGTGTACAACAGAGAGTTCTTTACGGGGTGGGTTGT
CGTCTCCTTTATTTGGGTCTGGGCGAGTGTGCTCATCTGTGTGATATATC
CGGTGGTAAGTGGTCACGCTTTCGAGAAATGAATGTCTCACGAGCTTCGA
GTCCTGCCCCCAGGTGCGGGCTATGGAATCGTCATCGGCATCGGTGGCAT
CTTCGCCCTATTCATGCTCGGTATCTCCTGGCTACAGAATCGCTATACGC
AGTTCTCCACCCATCGCGCCGAAGAATTCAACACCGCCTCACGATCCGTC
AAGCCGGGCTTGATCTCCGCTGGCATTGTCTCCTCCTGGACATGGTCAGC
TACACTCCTAACCAGTTCGACTTTTGCATATTCCTATGGTGTCTGCGGAC
CCATGTGGTACGGTGCTATCGGCACCCTGCAGATCCTTCTGTTTGCCCTG
ATTGCGGTCAAAATCAAAGCCAATGCACCGGGCGCACACACCATGCCGGA
GATTGTCCTCGCTCGACACGGCAAGGTTGCTCATCTCACGTACTTGTACA
ATGGTCTGGCTACGAATATGCTGGTTAGTGCGTGTTTGGTGCTAGGTGGC
GCGCAGGTGGTGGCGGCACTCACGGGGATGAATGTGTATGCTGCCAATTT
CCTTATTCCTGCCGTAGTCGCGGCGTATGTTATCGTCGGTGGATTGCGCG
CGACTTTCATCGCGGATTATACTCATACCGTTATTCTGTTTATCGCGATA
TTGGTGTTTGGGTTTTCGGTCTCGGCTACCAGTGACCTCATTGGAAGCCC
TGGAAAGTTGTACGATTTGCTGCAGGAGGCGTCGCGGAATATGCCGATTG
ATCGGAATACTGATGGGTCGTATCTTGCGTTTCGGTCCGTTGGTGGTCTG
ATCTTCGCGGTTGACATATTTGTCTCTGGGTTCAGTACTGTCTGGCTCGA
CCAAGCCTATTGGCAGCGAGCAATTGCGTCGCGACCTGAATCTTCCGTGA
AGGCATACATGCTAGGAGGTGTTGCATGGTATGGCATTCCGTTCGGCTTT
GCTACGGCCATGGGTCTCGGTTGTGCGGCTCTTACCAACAACCCAGCCTT
TCCCACATACCCCAACCCATTATCAGCTTCTCAAGTCGACGCCGGACTTT
CCGCCCCAGCAACCGCAATCACCCTCCTAGGGAAAGGCGGCGCCGTGCTC
ATGCTCATCCTCCTGTTCATGGCAGTGACTAGTTCCACATCCGCTGAACT
CATCGCTGTCTCCTCCCTACTCACCTTTGATGTGTACAAAACCTACATCC
GCCCGAACACCGACTCTGCGACACTCGTGCGCGTCAGCCACTGGGGCATT
GTCATCTATGCCATTATCCTCGCCGCGTTCTGCAGTATCCTCAATGCTGC
AGGCGTCAGCCTCACCTGGTTACTAACAGTGCTGGGAGTCATCGTCGGCG
GAGCAGCAATTCCCGTGGGACTTATTCTGCTCTGGGACCGCATGTCCACT
GTTGCGGCTATTGCAGCTCCATGGATTGGATTTGGCTTGGGTATCATCGT
CTGGTTCATCACTTCGTGGAAGCGATCGGGCGGCATCAGTGTTGCGACGA
CGGGCGATGCCACAAATGCCGTAGCTGGAAACTTGGCCTCGTTTGGGGTG
GGCACTATTTCCGCTGTGCTTTTGAGCTTGATATTTCCAGGAAAGCGCAG
ACACGACACGTCGGCAACGAATAGTATCACAGGAGTCCCTGTCGAACCAG
AGAAGACCTCGACAGAGGCATCAGCCAAGAAGGATAATGATACCGAAATA
GTCACAACAATGGCAACCCCGACTGACCCCATCACGCAGCCGAAGAACGA
TATAATTGAGTACCTCGAAACCGAGACCATTGAGCCCATGGATCCTGCTC
TGGTTAAGAAGGCGGAGCGATTTGCTTGGACAGCGAATGCTATTTTTATT
GCGATTGCAGTGATACTTGTTCCTTTCACTTTGTTCGGGACGAGGTATGT
GTACAACAGAGAGTTCTTTACGGGGTGGGTTGTCGTCTCCTTTATTTGGG
TCTGGGCGAGTGTGCTCATCTGTGTGATATATCCGGTGGTAAGTGGTCAC
GCTTTCGAGAAATGAATGTCTCACGAGCTTCGAGTCCTGCCCCCAGGTGC
GGGCTATGGAATCGTCATCGGCATCGGTGGCATCTTCGCCCTATTCATGC
TCGGTATCTCCTGGCTACAGAATCGCTATACGCAGTTCTCCACCCATCGC
GCCGAAGAATTCAACACCGCCTCACGATCCGTCAAGCCGGGCTTGATCTC
CGCTGGCATTGTCTCCTCCTGGACATGGTCAGCTACACTCCTAACCAGTT
CGACTTTTGCATATTCCTATGGTGTCTGCGGACCCATGTGGTACGGTGCT
ATCGGCACCCTGCAGATCCTTCTGTTTGCCCTGATTGCGGTCAAAATCAA
AGCCAATGCACCGGGCGCACACACCATGCCGGAGATTGTCCTCGCTCGAC
ACGGCAAGGTTGCTCATCTCACGTACTTGTACAATGGTCTGGCTACGAAT
ATGCTGGTTAGTGCGTGTTTGGTGCTAGGTGGCGCGCAGGTGGTGGCGGC
ACTCACGGGGATGAATGTGTATGCTGCCAATTTCCTTATTCCTGCCGTAG
TCGCGGCGTATGTTATCGTCGGTGGATTGCGCGCGACTTTCATCGCGGAT
TATACTCATACCGTTATTCTGTTTATCGCGATATTGGTGTTTGGGTTTTC
GGTCTCGGCTACCAGTGACCTCATTGGAAGCCCTGGAAAGTTGTACGATT
TGCTGCAGGAGGCGTCGCGGAATATGCCGATTGATCGGAATACTGATGGG
TCGTATCTTGCGTTTCGGTCCGTTGGTGGTCTGATCTTCGCGGTTGACAT
ATTTGTCTCTGGGTTCAGTACTGTCTGGCTCGACCAAGCCTATTGGCAGC
GAGCAATTGCGTCGCGACCTGAATCTTCCGTGAAGGCATACATGCTAGGA
GGTGTTGCATGGTATG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016020 | membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR038377 |
| DBxref | InterPro:IPR001734 |
| DBxref | PFAM:PF00474 |
| Product | transporter solute:sodium symporter (SSS) family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000007.1 | supercontig | NKJJ01000007.1:773064..775103 - |
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