You are here

Home

CAN33_34185-T1, CAN33_34185-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_34185-T1
Unique NameCAN33_34185-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000007.1:841706..843747-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_34185-T1 ID=CAN33_34185-T1|Name=CAN33_34185-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2042bp|location=Sequence derived from alignment at NKJJ01000007.1:841706..843747- (Aspergillus niger FDAARGOS_311)
ATGACAGCCTCCATTGAAATACTGCAGTCCGATTATGATTTGAAATTTCA
ACCAGTGGATTCGTCCCTCCATGAGCGACTATCTGACTTTCTTAAGACCA
GGGCGAATCTGGTGGAGGAGAAGAAGTGGATGATACACCTAGGAACCCAT
ACCATCATCGTCCGGGACCAACTTACCAAGGCGTTCCAAAACATCCTGGC
AGTGAAAGATATTGTGACTACTGCGGCAAATGCAAGTCTCCCAGCCTCAC
TTGCCTGTGCTGGAATAATGGCCTGCTTTACGGTGAGCACTGGTTTAGTA
CTATTCCTGGCAACAAATGGCCTATTGTCTAACGATGTTTAGACGGTCAT
CCAAGCAGCAGAGCAGCATTCCCATCTCCTGCAAGGATTAGAATCTATTT
CTGAGTTAATTTGCCGATTGCATGTAATGGAGCGCCTTTATCTGCACTCG
GACACAAAACAGAACATTGGCCTCCTTGATGACCTTCGGAAAACTATGAT
TTCATTTTACTCAAAGATACTGGAATTCCAGGCCCGAGCGCTCTGCTATT
TACACAGACCTCGAGCATACCAATTCTGGAGAGATGTCCTTAACCGCGAC
GGCTGGGCTAACCTGCTGCAAGAATTTGAGAGATACCAGATCACACTAGG
TCGAACTACTTCCGTTATTGCAGATGCAGGATCAATGCAAAGATACGAAG
AGCTTCAGGACAAGTACAAAAGAATATTGGAGGCCTTACACAATCGCAAC
ATATGGACAGCTACATCCGATCGAGATGAGAAGGTGAAACGATTCCTCAA
CCTGCTCTACACCTGTCCCTATAAGGACCGAAAAGACCGAAACAGCAAGC
GTGTCCTTGGAACCTGTGAATGGTTCATAGGGCATGAGAAATTCCATGCC
TGGCAAGGGAGTTCAGGAAATGGCCTCTCAAGTCTACTATGGGTGTCGGC
TGATCCAGGATGTGGCAAGTCAGTCTTAACTCGATATCTGGTGGATGAGG
TTCTTGTCAGCAATGATAAGCGAACAGTCTGCTATTTCTTCTTTAAAGAT
GACTTTACCGACCAGAAGAGCGCAACAAGCGCGCTTTCAGTCATATTAAG
GCAGCTATTCATAGCGCAGCCTCACCTTTTGCACGACGCAATACTGGATA
AAGCGGACACTGACAGTAGCAAGCTTACTCAGTCATTCTCAGAGCTGTGG
AGTATACTCATGTCTGTTTCGACCGATCCAAAGGCGGCAGAAATATATTG
TCTCCTTGATGCCTTAGACGAATGCCATGACGAGGACCGGAGCCGGCTCA
TCAACGCTGTCAACGACTTTTATGCAAACACCCACAAGAATAGCAAACTG
AAGTTCTTGATTACAAGTAGACCATATGAGCATATACGGCGTGGATTCTC
CCCTCTTATCACAGAATCACCCACCATCCACTTAAGTGGTGACGACGGGG
AAGAGGCTGAGCAGATATCTCATGAAATAAATCTTGTCATCCGAAAAAGA
GTGCAGGACATCAGCAAGCAAAGATCGCTGATGAAGGAGGAATGCACAAT
GCTCATAGACAGGCTTACTGCGGTTCAAAATCGAACTTATCTGTGGGTGA
GTCTGATATTAGATGTCCTCGAGAATACCCCGGAGTTCTCAAAAGGTAAA
GTCCATCGGATACTGAGTGACCTACCCACCACCGTTGACTGTGCCTATGA
GAGAATCTTGGATCGAAGTCCAGATAAGGAAAAGGCTAAGATAACTCTCC
ATATTATTACGGCAGCTATGCGACCTCTTTCCTTGGAAGAACTATCTCTG
GCCCTAGCACTCAGCGCAGGCTATCAAGCCCCAACAGATATAGTTGATAA
CATGGAGCCAACGCATCGCTTCAAAAAGACCCTAAGAGACCTTTGCGGGC
TCTTTGTGATCATTCTGGATGACAAGGTCTATCTTCTGCATCAGACGGCG
AAAGAGTTTTTGGTTCGGGACAACAACTCTATCCTGGACAAAACCCTCTC
CCAACCCACAACAGGGTGGAAGTATTCACTCCTTCCAGGTGA
back to top

Coding sequence (CDS) from alignment at NKJJ01000007.1:841706..843747-

>CAN33_34185-T1 ID=CAN33_34185-T1|Name=CAN33_34185-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=5877bp|location=Sequence derived from alignment at NKJJ01000007.1:841706..843747- (Aspergillus niger FDAARGOS_311)
GTGAACGGTCATCCAAGCAGCAGAGCAGCATTCCCATCTCCTGCAAGGAT
TAGAATCTATTTCTGAGTTAATTTGCCGATTGCATGTAATGGAGCGCCTT
TATCTGCACTCGGACACAAAACAGAACATTGGCCTCCTTGATGACCTTCG
GAAAACTATGATTTCATTTTACTCAAAGATACTGGAATTCCAGGCCCGAG
CGCTCTGCTATTTACACAGACCTCGAGCATACCAATTCTGGAGAGATGTC
CTTAACCGCGACGGCTGGGCTAACCTGCTGCAAGAATTTGAGAGATACCA
GATCACACTAGGTCGAACTACTTCCGTTATTGCAGATGCAGGATCAATGC
AAAGATACGAAGAGCTTCAGGACAAGTACAAAAGAATATTGGAGGCCTTA
CACAATCGCAACATATGGACAGCTACATCCGATCGAGATGAGAAGGTGAA
ACGATTCCTCAACCTGCTCTACACCTGTCCCTATAAGGACCGAAAAGACC
GAAACAGCAAGCGTGTCCTTGGAACCTGTGAATGGTTCATAGGGCATGAG
AAATTCCATGCCTGGCAAGGGAGTTCAGGAAATGGCCTCTCAAGTCTACT
ATGGGTGTCGGCTGATCCAGGATGTGGCAAGTCAGTCTTAACTCGATATC
TGGTGGATGAGGTTCTTGTCAGCAATGATAAGCGAACAGTCTGCTATTTC
TTCTTTAAAGATGACTTTACCGACCAGAAGAGCGCAACAAGCGCGCTTTC
AGTCATATTAAGGCAGCTATTCATAGCGCAGCCTCACCTTTTGCACGACG
CAATACTGGATAAAGCGGACACTGACAGTAGCAAGCTTACTCAGTCATTC
TCAGAGCTGTGGAGTATACTCATGTCTGTTTCGACCGATCCAAAGGCGGC
AGAAATATATTGTCTCCTTGATGCCTTAGACGAATGCCATGACGAGGACC
GGAGCCGGCTCATCAACGCTGTCAACGACTTTTATGCAAACACCCACAAG
AATAGCAAACTGAAGTTCTTGATTACAAGTAGACCATATGAGCATATACG
GCGTGGATTCTCCCCTCTTATCACAGAATCACCCACCATCCACTTAAGTG
GTGACGACGGGGAAGAGGCTGAGCAGATATCTCATGAAATAAATCTTGTC
ATCCGAAAAAGAGTGCAGGACATCAGCAAGCAAAGATCGCTGATGAAGGA
GGAATGCACAATGCTCATAGACAGGCTTACTGCGGTTCAAAATCGAACTT
ATCTGTGGGTGAGTCTGATATTAGATGTCCTCGAGAATACCCCGGAGTTC
TCAAAAGGTAAAGTCCATCGGATACTGAGTGACCTACCCACCACCGTTGA
CTGTGCCTATGAGAGAATCTTGGATCGAAGTCCAGATAAGGAAAAGGCTA
AGATAACTCTCCATATTATTACGGCAGCTATGCGACCTCTTTCCTTGGAA
GAACTATCTCTGGCCCTAGCACTCAGCGCAGGCTATCAAGCCCCAACAGA
TATAGTTGATAACATGGAGCCAACGCATCGCTTCAAAAAGACCCTAAGAG
ACCTTTGCGGGCTCTTTGTGATCATTCTGGATGACAAGGTCTATCTTCTG
CATCAGACGGCGAAAGAGTTTTTGGTTCGGGACAACAACTCTATCCTGGA
CAAAACCCTCTCCCAACCCACAACAGGATGACAGCCTCCATTGAAATACT
GCAGTCCGATTATGATTTGAAATTTCAACCAGTGGATTCGTCCCTCCATG
AGCGACTATCTGACTTTCTTAAGACCAGGGCGAATCTGGTGGAGGAGAAG
AAGTGGATGATACACCTAGGAACCCATACCATCATCGTCCGGGACCAACT
TACCAAGGCGTTCCAAAACATCCTGGCAGTGAAAGATATTGTGACTACTG
CGGCAAATGCAAGTCTCCCAGCCTCACTTGCCTGTGCTGGAATAATGGCC
TGCTTTACGGTGAACGGTCATCCAAGCAGCAGAGCAGCATTCCCATCTCC
TGCAAGGATTAGAATCTATTTCTGAGTTAATTTGCCGATTGCATGTAATG
GAGCGCCTTTATCTGCACTCGGACACAAAACAGAACATTGGCCTCCTTGA
TGACCTTCGGAAAACTATGATTTCATTTTACTCAAAGATACTGGAATTCC
AGGCCCGAGCGCTCTGCTATTTACACAGACCTCGAGCATACCAATTCTGG
AGAGATGTCCTTAACCGCGACGGCTGGGCTAACCTGCTGCAAGAATTTGA
GAGATACCAGATCACACTAGGTCGAACTACTTCCGTTATTGCAGATGCAG
GATCAATGCAAAGATACGAAGAGCTTCAGGACAAGTACAAAAGAATATTG
GAGGCCTTACACAATCGCAACATATGGACAGCTACATCCGATCGAGATGA
GAAGGTGAAACGATTCCTCAACCTGCTCTACACCTGTCCCTATAAGGACC
GAAAAGACCGAAACAGCAAGCGTGTCCTTGGAACCTGTGAATGGTTCATA
GGGCATGAGAAATTCCATGCCTGGCAAGGGAGTTCAGGAAATGGCCTCTC
AAGTCTACTATGGGTGTCGGCTGATCCAGGATGTGGCAAGTCAGTCTTAA
CTCGATATCTGGTGGATGAGGTTCTTGTCAGCAATGATAAGCGAACAGTC
TGCTATTTCTTCTTTAAAGATGACTTTACCGACCAGAAGAGCGCAACAAG
CGCGCTTTCAGTCATATTAAGGCAGCTATTCATAGCGCAGCCTCACCTTT
TGCACGACGCAATACTGGATAAAGCGGACACTGACAGTAGCAAGCTTACT
CAGTCATTCTCAGAGCTGTGGAGTATACTCATGTCTGTTTCGACCGATCC
AAAGGCGGCAGAAATATATTGTCTCCTTGATGCCTTAGACGAATGCCATG
ACGAGGACCGGAGCCGGCTCATCAACGCTGTCAACGACTTTTATGCAAAC
ACCCACAAGAATAGCAAACTGAAGTTCTTGATTACAAGTAGACCATATGA
GCATATACGGCGTGGATTCTCCCCTCTTATCACAGAATCACCCACCATCC
ACTTAAGTGGTGACGACGGGGAAGAGGCTGAGCAGATATCTCATGAAATA
AATCTTGTCATCCGAAAAAGAGTGCAGGACATCAGCAAGCAAAGATCGCT
GATGAAGGAGGAATGCACAATGCTCATAGACAGGCTTACTGCGGTTCAAA
ATCGAACTTATCTGTGGGTGAGTCTGATATTAGATGTCCTCGAGAATACC
CCGGAGTTCTCAAAAGGTAAAGTCCATCGGATACTGAGTGACCTACCCAC
CACCGTTGACTGTGCCTATGAGAGAATCTTGGATCGAAGTCCAGATAAGG
AAAAGGCTAAGATAACTCTCCATATTATTACGGCAGCTATGCGACCTCTT
TCCTTGGAAGAACTATCTCTGGCCCTAGCACTCAGCGCAGGCTATCAAGC
CCCAACAGATATAGTTGATAACATGGAGCCAACGCATCGCTTCAAAAAGA
CCCTAAGAGACCTTTGCGGGCTCTTTGTGATCATTCTGGATGACAAGGTC
TATCTTCTGCATCAGACGGCGAAAGAGTTTTTGGTTCGGGACAACAACTC
TATCCTGGACAAAACCCTCTCCCAACCCACAACAGGATGACAGCCTCCAT
TGAAATACTGCAGTCCGATTATGATTTGAAATTTCAACCAGTGGATTCGT
CCCTCCATGAGCGACTATCTGACTTTCTTAAGACCAGGGCGAATCTGGTG
GAGGAGAAGAAGTGGATGATACACCTAGGAACCCATACCATCATCGTCCG
GGACCAACTTACCAAGGCGTTCCAAAACATCCTGGCAGTGAAAGATATTG
TGACTACTGCGGCAAATGCAAGTCTCCCAGCCTCACTTGCCTGTGCTGGA
ATAATGGCCTGCTTTACGGTGAACGGTCATCCAAGCAGCAGAGCAGCATT
CCCATCTCCTGCAAGGATTAGAATCTATTTCTGAGTTAATTTGCCGATTG
CATGTAATGGAGCGCCTTTATCTGCACTCGGACACAAAACAGAACATTGG
CCTCCTTGATGACCTTCGGAAAACTATGATTTCATTTTACTCAAAGATAC
TGGAATTCCAGGCCCGAGCGCTCTGCTATTTACACAGACCTCGAGCATAC
CAATTCTGGAGAGATGTCCTTAACCGCGACGGCTGGGCTAACCTGCTGCA
AGAATTTGAGAGATACCAGATCACACTAGGTCGAACTACTTCCGTTATTG
CAGATGCAGGATCAATGCAAAGATACGAAGAGCTTCAGGACAAGTACAAA
AGAATATTGGAGGCCTTACACAATCGCAACATATGGACAGCTACATCCGA
TCGAGATGAGAAGGTGAAACGATTCCTCAACCTGCTCTACACCTGTCCCT
ATAAGGACCGAAAAGACCGAAACAGCAAGCGTGTCCTTGGAACCTGTGAA
TGGTTCATAGGGCATGAGAAATTCCATGCCTGGCAAGGGAGTTCAGGAAA
TGGCCTCTCAAGTCTACTATGGGTGTCGGCTGATCCAGGATGTGGCAAGT
CAGTCTTAACTCGATATCTGGTGGATGAGGTTCTTGTCAGCAATGATAAG
CGAACAGTCTGCTATTTCTTCTTTAAAGATGACTTTACCGACCAGAAGAG
CGCAACAAGCGCGCTTTCAGTCATATTAAGGCAGCTATTCATAGCGCAGC
CTCACCTTTTGCACGACGCAATACTGGATAAAGCGGACACTGACAGTAGC
AAGCTTACTCAGTCATTCTCAGAGCTGTGGAGTATACTCATGTCTGTTTC
GACCGATCCAAAGGCGGCAGAAATATATTGTCTCCTTGATGCCTTAGACG
AATGCCATGACGAGGACCGGAGCCGGCTCATCAACGCTGTCAACGACTTT
TATGCAAACACCCACAAGAATAGCAAACTGAAGTTCTTGATTACAAGTAG
ACCATATGAGCATATACGGCGTGGATTCTCCCCTCTTATCACAGAATCAC
CCACCATCCACTTAAGTGGTGACGACGGGGAAGAGGCTGAGCAGATATCT
CATGAAATAAATCTTGTCATCCGAAAAAGAGTGCAGGACATCAGCAAGCA
AAGATCGCTGATGAAGGAGGAATGCACAATGCTCATAGACAGGCTTACTG
CGGTTCAAAATCGAACTTATCTGTGGGTGAGTCTGATATTAGATGTCCTC
GAGAATACCCCGGAGTTCTCAAAAGGTAAAGTCCATCGGATACTGAGTGA
CCTACCCACCACCGTTGACTGTGCCTATGAGAGAATCTTGGATCGAAGTC
CAGATAAGGAAAAGGCTAAGATAACTCTCCATATTATTACGGCAGCTATG
CGACCTCTTTCCTTGGAAGAACTATCTCTGGCCCTAGCACTCAGCGCAGG
CTATCAAGCCCCAACAGATATAGTTGATAACATGGAGCCAACGCATCGCT
TCAAAAAGACCCTAAGAGACCTTTGCGGGCTCTTTGTGATCATTCTGGAT
GACAAGGTCTATCTTCTGCATCAGACGGCGAAAGAGTTTTTGGTTCGGGA
CAACAACTCTATCCTGGACAAAACCCTCTCCCAACCCACAACAGGATGAC
AGCCTCCATTGAAATACTGCAGTCCGATTATGATTTGAAATTTCAACCAG
TGGATTCGTCCCTCCATGAGCGACTATCTGACTTTCTTAAGACCAGGGCG
AATCTGGTGGAGGAGAAGAAGTGGATGATACACCTAGGAACCCATACCAT
CATCGTCCGGGACCAACTTACCAAGGCGTTCCAAAACATCCTGGCAGTGA
AAGATATTGTGACTACTGCGGCAAATGCAAGTCTCCCAGCCTCACTTGCC
TGTGCTGGAATAATGGCCTGCTTTACG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_34185CAN33_34185Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_34185-T1CAN33_34185-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_34185-T1.cdsCAN33_34185-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_34185-T1.exon3CAN33_34185-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_34185-T1.exon2CAN33_34185-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_34185-T1.exon1CAN33_34185-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR031359
DBxrefPFAM:PF17100
ProductNACHT domain family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000007.1supercontigNKJJ01000007.1:841706..843747 -
Powered by Drupal