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CAN33_34230-T1, CAN33_34230-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_34230-T1
Unique NameCAN33_34230-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000007.1:871544..873395+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_34230-T1 ID=CAN33_34230-T1|Name=CAN33_34230-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1852bp|location=Sequence derived from alignment at NKJJ01000007.1:871544..873395+ (Aspergillus niger FDAARGOS_311)
ATGCGTGCTCCTCCCTCCACCCATGCGAGGGATGCGGTAATTGGTCCCCT
GAGATCGCGGCGGGGTTGCAAAACCTGCAAGTAGGTGCTTCGAATCCATA
TCTCTGCGGCGCAAGCTTATAGGTATCATCTCAAGGGCCCGGAGAGTCAA
GTGTGGACAGGAAAAGCCAAGCTGTCTTCGATGCAGCAAGACAGGCCGTA
AGTGCGAGTATGAAGGCCCAAATTTAGGCACGTTTTCCTCCACACCTGCG
ACACTTTCAATTCTCGACAAGCCCCTGTCCTCGGCACCGGATACAGTCTG
GAAGGAGCGTCGCGCATTTGCCTACTACTTCCAACATATTGCCCTGTTTA
TCGGCGGGGGTCTGGAAGTTGACTTCTGGAGTACCATCGTTCCGCAGATT
TGCCGCAGCGAACCCGCTGTGTGGGATGCCATCATCTCCCTGAGTACCCT
GTTCGAAAGCCCCGAGCCATGTCCAGACATAGCTTTTCTACGCCAGAGAG
ATGTCCTTCTCCTTAACCAGTACCACCGAGACGCCATCAGCTGGTATTCC
CGCTCAATGTCCCAAGTCCGTCAGCGACTAGAGCGCGGTGACGGGGATGT
CTTGGTCGGACTGGTAAGCTGTATACTCTTTATGTGCATTGAAGGTTTCC
AGGGTGGTGCGGCACAAGCTACTCGGCTTTACTGTCAAGGCGTGCAACTC
ATTGTCACCTTGCGTGGTCAGATCGCTTCCGGGGCCGTATCGTCATCGAA
AGCTGCATGGTTGGAGGATATTATCGTTCCGATATTTATCCGTCTCGGGG
CGACAGCGCTCAATTTCTCCACTGTTCCAGTCGGCGCTTTACTACCCGAT
GTTCAGCATGTATTAACACAGGGGTTTACTTCCCTCAAATCGGCTCGCGA
GGCAATTGTTCTCTTACACACAGAGACTCAGCTTTTTCAGCGTATTTGCC
TACCACACTTGCTGAAGTCCGATGGCTTCCAGCCACCTCCTGAGCTAGTC
AATCAACGACTCGCTCTATTTGGTAGACTAAAGGTGTGGCACGCTGCGTT
CACGGACTTGATGGAAACCTTGCGCATGAAAGGGGCTTTATCACCGCAGC
AAATAAGCACTGGCGCCCTTCTTCTCGCTTATCACGAGATGCTATACGTA
ACGATCGGAACGTCCACATGTCAGTTGGAGACCGCAAACGACGCATACCT
TCTGCAATTCCAGAACATAGTGGATCAGTCTAAGTTCGCGCTAGGTGCTT
CGGCTCGATCAGACGGATCCCAACCTCCACTCACGCTTGAACTCGGTATC
TCAATACCCCTGTGGTTCACTAGTCTAAAATGCCGAGAACCCAAGCTTCG
ACAAACAGCACTAAGCCTAGCAGGTCAAGCACCTGCAGTGCAGGCGTTCT
ATAAAGTGAATACTGGGGCAAGGTGGTCACACACCATAATTACAATAGAA
GAAGTGTGCGCAGTGGCTATGAAGTCATCTGAAGGACTACCGGAGTCAAC
GAATCAACTCCAATACTCGCATTGTGAAGACTCTGGTATTAGCGTATTCG
GTTCAGATCTTGGAAGTCAACCCAGCACTCCAGGGCTGGAATTTGTGCCA
AGCCCATATTCCGTGGATTCGGATGTGGACGCCGGAACAGCGGTTACAGA
ACTCGTCCCAGAAGAGGCACGCATCAGACCCATAAATCTCTTCCGCGTCC
AAGACGGCTTCCCTCCGGGAACAACAGATGAAGAGATTGCAAGGTGGAGT
CCTTACCGTGAACAAAGCTTTCTGCATTATTTGCGAAATGAGCGTGATCC
AATCAGTGGTGCTTGGAAGATAGCCCATGGATTTACTCCAATCGATTATT
GA
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Coding sequence (CDS) from alignment at NKJJ01000007.1:871544..873395+

>CAN33_34230-T1 ID=CAN33_34230-T1|Name=CAN33_34230-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3594bp|location=Sequence derived from alignment at NKJJ01000007.1:871544..873395+ (Aspergillus niger FDAARGOS_311)
ATGCGTGCTCCTCCCTCCACCCATGCGAGGGATGCGGTAATTGGTCCCCT
GAGATCGCGGCGGGGTTGCAAAACCTGCAAGGCCCGGAGAGTCAAGTGTG
GACAGGAAAAGCCAAGCTGTCTTCGATGCAGCAAGACAGGCCGTAAGTGC
GAGTATGAAGGCCCAAATTTAGGCACGTTTTCCTCCACACCTGCGACACT
TTCAATTCTCGACAAGCCCCTGTCCTCGGCACCGGATACAGTCTGGAAGG
AGCGTCGCGCATTTGCCTACTACTTCCAACATATTGCCCTGTTTATCGGC
GGGGGTCTGGAAGTTGACTTCTGGAGTACCATCGTTCCGCAGATTTGCCG
CAGCGAACCCGCTGTGTGGGATGCCATCATCTCCCTGAGTACCCTGTTCG
AAAGCCCCGAGCCATGTCCAGACATAGCTTTTCTACGCCAGAGAGATGTC
CTTCTCCTTAACCAGTACCACCGAGACGCCATCAGCTGGTATTCCCGCTC
AATGTCCCAAGTCCGTCAGCGACTAGAGCGCGGTGACGGGGATGTCTTGG
TCGGACTGGTAAGCTGTATACTCTTTATGTGCATTGAAGGTTTCCAGGGT
GGTGCGGCACAAGCTACTCGGCTTTACTGTCAAGGCGTGCAACTCATTGT
CACCTTGCGTGGTCAGATCGCTTCCGGGGCCGTATCGTCATCGAAAGCTG
CATGGTTGGAGGATATTATCGTTCCGATATTTATCCGTCTCGGGGCGACA
GCGCTCAATTTCTCCACTGTTCCAGTCGGCGCTTTACTACCCGATGTTCA
GCATGTATTAACACAGGGGTTTACTTCCCTCAAATCGGCTCGCGAGGCAA
TTGTTCTCTTACACACAGAGACTCAGCTTTTTCAGCGTATTTGCCTACCA
CACTTGCTGAAGTCCGATGGCTTCCAGCCACCTCCTGAGCTAGTCAATCA
ACGACTCGCTCTATTTGGTAGACTAAAGGTGTGGCACGCTGCGTTCACGG
ACTTGATGGAAACCTTGCGCATGAAAGGGGCTTTATCACCGCAGCAAATA
AGCACTGGCGCCCTTCTTCTCGCTTATCACGAGATGCTATACGTAACGAT
CGGAACGTCCACATGTCAGTTGGAGACCGCAAACGACGCATACCTTCTGC
AATTCCAGAACATAGTGGATCAGTCTAAGTTCGCGCTAGGTGCTTCGGCT
CGATCAGACGGATCCCAACCTCCACTCACGCTTGAACTCGGTATCTCAAT
ACCCCTGTGGTTCACTAGTCTAAAATGCCGAGAACCCAAGCTTCGACAAA
CAGCACTAAGCCTAGCAGGTCAAGCACCTGCAGTGCAGGCGTTCTATAAA
GTGAATACTGGGGCAAGGTGGTCACACACCATAATTACAATAGAAGAAGT
GTGCGCAGTGGCTATGAAGTCATCTGAAGGACTACCGGAGTCAACGAATC
AACTCCAATACTCGCATTGTGAAGACTCTGGTATTAGCGTATTCGGTTCA
GATCTTGGAAGTCAACCCAGCACTCCAGGGCTGGAATTTGTGCCAAGCCC
ATATTCCGTGGATTCGGATGTGGACGCCGGAACAGCGGTTACAGAACTCG
TCCCAGAAGAGGCACGCATCAGACCCATAAATCTCTTCCGCGTCCAAGAC
GGCTTCCCTCCGGGAACAACAGATGAAGAGATTGCAAGGTGGAGTCCTTA
CCGTGAACAAAGCTTTCTGCATTATTTGCGAAATGAGCGTGATCCAATCA
GTGGTGCTTGGAAGATAGCCCATGGATTTACTCCAATCGATTATTGAATG
CGTGCTCCTCCCTCCACCCATGCGAGGGATGCGGTAATTGGTCCCCTGAG
ATCGCGGCGGGGTTGCAAAACCTGCAAGGCCCGGAGAGTCAAGTGTGGAC
AGGAAAAGCCAAGCTGTCTTCGATGCAGCAAGACAGGCCGTAAGTGCGAG
TATGAAGGCCCAAATTTAGGCACGTTTTCCTCCACACCTGCGACACTTTC
AATTCTCGACAAGCCCCTGTCCTCGGCACCGGATACAGTCTGGAAGGAGC
GTCGCGCATTTGCCTACTACTTCCAACATATTGCCCTGTTTATCGGCGGG
GGTCTGGAAGTTGACTTCTGGAGTACCATCGTTCCGCAGATTTGCCGCAG
CGAACCCGCTGTGTGGGATGCCATCATCTCCCTGAGTACCCTGTTCGAAA
GCCCCGAGCCATGTCCAGACATAGCTTTTCTACGCCAGAGAGATGTCCTT
CTCCTTAACCAGTACCACCGAGACGCCATCAGCTGGTATTCCCGCTCAAT
GTCCCAAGTCCGTCAGCGACTAGAGCGCGGTGACGGGGATGTCTTGGTCG
GACTGGTAAGCTGTATACTCTTTATGTGCATTGAAGGTTTCCAGGGTGGT
GCGGCACAAGCTACTCGGCTTTACTGTCAAGGCGTGCAACTCATTGTCAC
CTTGCGTGGTCAGATCGCTTCCGGGGCCGTATCGTCATCGAAAGCTGCAT
GGTTGGAGGATATTATCGTTCCGATATTTATCCGTCTCGGGGCGACAGCG
CTCAATTTCTCCACTGTTCCAGTCGGCGCTTTACTACCCGATGTTCAGCA
TGTATTAACACAGGGGTTTACTTCCCTCAAATCGGCTCGCGAGGCAATTG
TTCTCTTACACACAGAGACTCAGCTTTTTCAGCGTATTTGCCTACCACAC
TTGCTGAAGTCCGATGGCTTCCAGCCACCTCCTGAGCTAGTCAATCAACG
ACTCGCTCTATTTGGTAGACTAAAGGTGTGGCACGCTGCGTTCACGGACT
TGATGGAAACCTTGCGCATGAAAGGGGCTTTATCACCGCAGCAAATAAGC
ACTGGCGCCCTTCTTCTCGCTTATCACGAGATGCTATACGTAACGATCGG
AACGTCCACATGTCAGTTGGAGACCGCAAACGACGCATACCTTCTGCAAT
TCCAGAACATAGTGGATCAGTCTAAGTTCGCGCTAGGTGCTTCGGCTCGA
TCAGACGGATCCCAACCTCCACTCACGCTTGAACTCGGTATCTCAATACC
CCTGTGGTTCACTAGTCTAAAATGCCGAGAACCCAAGCTTCGACAAACAG
CACTAAGCCTAGCAGGTCAAGCACCTGCAGTGCAGGCGTTCTATAAAGTG
AATACTGGGGCAAGGTGGTCACACACCATAATTACAATAGAAGAAGTGTG
CGCAGTGGCTATGAAGTCATCTGAAGGACTACCGGAGTCAACGAATCAAC
TCCAATACTCGCATTGTGAAGACTCTGGTATTAGCGTATTCGGTTCAGAT
CTTGGAAGTCAACCCAGCACTCCAGGGCTGGAATTTGTGCCAAGCCCATA
TTCCGTGGATTCGGATGTGGACGCCGGAACAGCGGTTACAGAACTCGTCC
CAGAAGAGGCACGCATCAGACCCATAAATCTCTTCCGCGTCCAAGACGGC
TTCCCTCCGGGAACAACAGATGAAGAGATTGCAAGGTGGAGTCCTTACCG
TGAACAAAGCTTTCTGCATTATTTGCGAAATGAGCGTGATCCAATCAGTG
GTGCTTGGAAGATAGCCCATGGATTTACTCCAATCGATTATTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0008270zinc ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_34230CAN33_34230Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_34230-T1.exon1CAN33_34230-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_34230-T1.exon2CAN33_34230-T1.exon2Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_34230-T1.cdsCAN33_34230-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_34230-T1CAN33_34230-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR021858
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
ProductFungal Zn(2)-Cys(6) binuclear cluster domain family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000007.1supercontigNKJJ01000007.1:871544..873395 +
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