You are here

Home

CAN33_34275-T1, CAN33_34275-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_34275-T1
Unique NameCAN33_34275-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000007.1:889496..890414+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_34275-T1 ID=CAN33_34275-T1|Name=CAN33_34275-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=919bp|location=Sequence derived from alignment at NKJJ01000007.1:889496..890414+ (Aspergillus niger FDAARGOS_311)
ATGTCCCGTCCAAGGGCTGTGCGTGATGATCTCTCGATTGAAGAGGACGC
CAAAGTCAATGTTGACTACCTCGCACATTCCTGGACGTATGATGAGATGT
GGGCTACTAGAAAACATGTTCGCCAAATAAACCAGCACAGTATTGTCAGA
TGTCGCTTCGAAAATGCTCTTTGGAGAGCATGGATGGCTTCAACTCGACA
GACTATTCGCATGCCAGCGGCTTTTATCTCGTGGTAAGTGCTATCTCGAT
TCCCACTTTCCCCGATCGCGATTATCTGACTTGGTGCAGGGACAAAGATA
GCGACATCACTTGGCTCTATGGCCCACTGAAGTCCAGCAGAAGCCCCAGC
CCAACACCTAGCGAAGCACCCTCGACTCAAGCCCCCAGGAAGCCTTCTTT
GAAGCGAAAGCCCAGCATTTGGGAGCTTCCAGAAGACCCTTCGACATCGA
ACGACTCTACAGATGGAAAGTCTCTGCTTGGCCGTTTCTGGAACATAACC
ATCCACTCAGTCCCTAGTGTAAGCTGAAAGCAGACCACATACTTCCTTCA
TCAATTCTGATTTTTCTTTTCGCACAGATAATCCTCAGCTCCCGCCAAGA
CTGGAACAAGCGGAGAAAATGCCGCGTCCGATTCGAAGAAGAGGTGCAGC
AATGCCAGTACGCTCGTGACGGAAACACAATATCGCAATACAGCTACAAC
TACAACTATCCGTTTTTCTTGGAAGAGGCTGGACTATATGAAAGCCATCA
GTGGCAGCAGACTATTGAACCGTTACCATCAACCTTTCTTAGTGGCTACG
AGACGCTTCCTCCAGCGGACTCGGGTCAGTTTTATTCGATGTCAAATTTC
CTGGAGGAGCTGGAGTATGTCTTCTCTGTCTTTGTTCATTGGCCTTCTCT
ACCGCCTCGAGTTACTTGA
back to top

Coding sequence (CDS) from alignment at NKJJ01000007.1:889496..890414+

>CAN33_34275-T1 ID=CAN33_34275-T1|Name=CAN33_34275-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2412bp|location=Sequence derived from alignment at NKJJ01000007.1:889496..890414+ (Aspergillus niger FDAARGOS_311)
ATGTCCCGTCCAAGGGCTGTGCGTGATGATCTCTCGATTGAAGAGGACGC
CAAAGTCAATGTTGACTACCTCGCACATTCCTGGACGTATGATGAGATGT
GGGCTACTAGAAAACATGTTCGCCAAATAAACCAGCACAGTATTGTCAGA
TGTCGCTTCGAAAATGCTCTTTGGAGAGCATGGATGGCTTCAACTCGACA
GACTATTCGCATGCCAGCGGCTTTTATCTCGTGGGACAAAGATAGCGACA
TCACTTGGCTCTATGGCCCACTGAAGTCCAGCAGAAGCCCCAGCCCAACA
CCTAGCGAAGCACCCTCGACTCAAGCCCCCAGGAAGCCTTCTTTGAAGCG
AAAGCCCAGCATTTGGGAGCTTCCAGAAGACCCTTCGACATCGAACGACT
CTACAGATGGAAAGTCTCTGCTTGGCCGTTTCTGGAACATAACCATCCAC
TCAGTCCCTAGTATAATCCTCAGCTCCCGCCAAGACTGGAACAAGCGGAG
AAAATGCCGCGTCCGATTCGAAGAAGAGGTGCAGCAATGCCAGTACGCTC
GTGACGGAAACACAATATCGCAATACAGCTACAACTACAACTATCCGTTT
TTCTTGGAAGAGGCTGGACTATATGAAAGCCATCAGTGGCAGCAGACTAT
TGAACCGTTACCATCAACCTTTCTTAGTGGCTACGAGACGCTTCCTCCAG
CGGACTCGGGTCAGTTTTATTCGATGTCAAATTTCCTGGAGGAGCTGGAG
TATGTCTTCTCTGTCTTTGTTCATTGGCCTTCTCTACCGCCTCGAGTTAC
TTGAATGTCCCGTCCAAGGGCTGTGCGTGATGATCTCTCGATTGAAGAGG
ACGCCAAAGTCAATGTTGACTACCTCGCACATTCCTGGACGTATGATGAG
ATGTGGGCTACTAGAAAACATGTTCGCCAAATAAACCAGCACAGTATTGT
CAGATGTCGCTTCGAAAATGCTCTTTGGAGAGCATGGATGGCTTCAACTC
GACAGACTATTCGCATGCCAGCGGCTTTTATCTCGTGGGACAAAGATAGC
GACATCACTTGGCTCTATGGCCCACTGAAGTCCAGCAGAAGCCCCAGCCC
AACACCTAGCGAAGCACCCTCGACTCAAGCCCCCAGGAAGCCTTCTTTGA
AGCGAAAGCCCAGCATTTGGGAGCTTCCAGAAGACCCTTCGACATCGAAC
GACTCTACAGATGGAAAGTCTCTGCTTGGCCGTTTCTGGAACATAACCAT
CCACTCAGTCCCTAGTATAATCCTCAGCTCCCGCCAAGACTGGAACAAGC
GGAGAAAATGCCGCGTCCGATTCGAAGAAGAGGTGCAGCAATGCCAGTAC
GCTCGTGACGGAAACACAATATCGCAATACAGCTACAACTACAACTATCC
GTTTTTCTTGGAAGAGGCTGGACTATATGAAAGCCATCAGTGGCAGCAGA
CTATTGAACCGTTACCATCAACCTTTCTTAGTGGCTACGAGACGCTTCCT
CCAGCGGACTCGGGTCAGTTTTATTCGATGTCAAATTTCCTGGAGGAGCT
GGAGTATGTCTTCTCTGTCTTTGTTCATTGGCCTTCTCTACCGCCTCGAG
TTACTTGAATGTCCCGTCCAAGGGCTGTGCGTGATGATCTCTCGATTGAA
GAGGACGCCAAAGTCAATGTTGACTACCTCGCACATTCCTGGACGTATGA
TGAGATGTGGGCTACTAGAAAACATGTTCGCCAAATAAACCAGCACAGTA
TTGTCAGATGTCGCTTCGAAAATGCTCTTTGGAGAGCATGGATGGCTTCA
ACTCGACAGACTATTCGCATGCCAGCGGCTTTTATCTCGTGGGACAAAGA
TAGCGACATCACTTGGCTCTATGGCCCACTGAAGTCCAGCAGAAGCCCCA
GCCCAACACCTAGCGAAGCACCCTCGACTCAAGCCCCCAGGAAGCCTTCT
TTGAAGCGAAAGCCCAGCATTTGGGAGCTTCCAGAAGACCCTTCGACATC
GAACGACTCTACAGATGGAAAGTCTCTGCTTGGCCGTTTCTGGAACATAA
CCATCCACTCAGTCCCTAGTATAATCCTCAGCTCCCGCCAAGACTGGAAC
AAGCGGAGAAAATGCCGCGTCCGATTCGAAGAAGAGGTGCAGCAATGCCA
GTACGCTCGTGACGGAAACACAATATCGCAATACAGCTACAACTACAACT
ATCCGTTTTTCTTGGAAGAGGCTGGACTATATGAAAGCCATCAGTGGCAG
CAGACTATTGAACCGTTACCATCAACCTTTCTTAGTGGCTACGAGACGCT
TCCTCCAGCGGACTCGGGTCAGTTTTATTCGATGTCAAATTTCCTGGAGG
AGCTGGAGTATGTCTTCTCTGTCTTTGTTCATTGGCCTTCTCTACCGCCT
CGAGTTACTTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_34275CAN33_34275Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_34275-T1.exon1CAN33_34275-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_34275-T1.exon2CAN33_34275-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_34275-T1.exon3CAN33_34275-T1.exon3Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_34275-T1.cdsCAN33_34275-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_34275-T1CAN33_34275-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000007.1supercontigNKJJ01000007.1:889496..890414 +
Powered by Drupal