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CAN33_3435-T1, CAN33_3435-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_3435-T1
Unique NameCAN33_3435-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000004.1:2189606..2190614+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_3435-T1 ID=CAN33_3435-T1|Name=CAN33_3435-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1009bp|location=Sequence derived from alignment at NKJJ01000004.1:2189606..2190614+ (Aspergillus niger FDAARGOS_311)
ATGGAATCGAAAGCCACTCTGGGAAGTATCCAGAAAGCCGTCTGGGCCGG
AAAGCTGCCCTTACATATCACTCTGGCCCCATCAGAGAGCCGTACATTTG
ACCAGACAGATCCATACCTAGTACGTCCTCTTCTAGTACCTGATGAACTA
GAGCTAACTTACTCAGATCTCCTGTCCTCGCATATCATACTTACCATCGC
TTCTCCCGAGGCTGAGAGCTTTTTTCGCTTCCTCCTTAATTGACCCCAGT
TCCCGCCCGCACGAAGGCTGGTTCTCCTTCGAGGGCGTTCCGTTGAAATG
GCACTACCCAGTTGGCCTCCTTTATGACCTTTATGCGGGAGCAGATCCTG
CCTCTAAAGGAGGTGCTGAAACTGACTTGTTATCCACAACGGATGAAGAC
CCGTTACCATGGCGTCTAGTCGTGCATTTCAGCGACTGGCCTGATGAAGA
GCTCGTCCGACTTGATGCAGAAGGGATAGTGATGCACGATGCTTTTATCA
ATAGTGTCAAAGAAGCAGATTTCCTGAGGAATGGTACCGCCAAAGGAATC
ATGACCCTTTCCAGGGAGGATTCGGCGGGGCTTTGGGAGTCAGTGAGAGA
TGGTACGTTATTCCATTTACATGGACTTGAACAAAGAGGGAAGTGCTAAC
CACGCACCCAGTGGACCTTCCAAACTTCCAGCGAATATCCAACATTCTCC
TACCACCCCAGTCACAACCGTTCCGCAACATTCCTGTCCGGTTCTTTCTC
CCCCTCCCCCCAGACTCAGACTCGCCCTCTCTCAAAGTAGTCCAGTCTCC
TATTCCACCAACCATTCAACCAACTCCCGGAAACAGCGCCAGTGTCATGG
CAAGCCAATCCATATTGAGTACGTCCAGGGGTCCTCAACCACAGACCATA
GGGTCAGCACTACACTCACTACTACCACATCTATTTCCAAGTCGAAGGAC
ACCTGTCCTGGCGAAACCAGTACTGCATGGTGCCGCTGTGCCCATGGGGG
CACCACTAG
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Coding sequence (CDS) from alignment at NKJJ01000004.1:2189606..2190614+

>CAN33_3435-T1 ID=CAN33_3435-T1|Name=CAN33_3435-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3324bp|location=Sequence derived from alignment at NKJJ01000004.1:2189606..2190614+ (Aspergillus niger FDAARGOS_311)
ATGGAATCGAAAGCCACTCTGGGAAGTATCCAGAAAGCCGTCTGGGCCGG
AAAGCTGCCCTTACATATCACTCTGGCCCCATCAGAGAGCCGTACATTTG
ACCAGACAGATCCATACCTAATCTCCTGTCCTCGCATATCATACTTACCA
TCGCTTCTCCCGAGGCTGAGAGCTTTTTTCGCTTCCTCCTTAATTGACCC
CAGTTCCCGCCCGCACGAAGGCTGGTTCTCCTTCGAGGGCGTTCCGTTGA
AATGGCACTACCCAGTTGGCCTCCTTTATGACCTTTATGCGGGAGCAGAT
CCTGCCTCTAAAGGAGGTGCTGAAACTGACTTGTTATCCACAACGGATGA
AGACCCGTTACCATGGCGTCTAGTCGTGCATTTCAGCGACTGGCCTGATG
AAGAGCTCGTCCGACTTGATGCAGAAGGGATAGTGATGCACGATGCTTTT
ATCAATAGTGTCAAAGAAGCAGATTTCCTGAGGAATGGTACCGCCAAAGG
AATCATGACCCTTTCCAGGGAGGATTCGGCGGGGCTTTGGGAGTCAGTGA
GAGATGTGGACCTTCCAAACTTCCAGCGAATATCCAACATTCTCCTACCA
CCCCAGTCACAACCGTTCCGCAACATTCCTGTCCGGTTCTTTCTCCCCCT
CCCCCCAGACTCAGACTCGCCCTCTCTCAAAGTAGTCCAGTCTCCTATTC
CACCAACCATTCAACCAACTCCCGGAAACAGCGCCAGTGTCATGGCAAGC
CAATCCATATTGATCGAAGGACACCTGTCCTGGCGAAACCAGTACTGCAT
GGTGCCGCTGTGCCCATGGGGGCACCACTAGATGGAATCGAAAGCCACTC
TGGGAAGTATCCAGAAAGCCGTCTGGGCCGGAAAGCTGCCCTTACATATC
ACTCTGGCCCCATCAGAGAGCCGTACATTTGACCAGACAGATCCATACCT
AATCTCCTGTCCTCGCATATCATACTTACCATCGCTTCTCCCGAGGCTGA
GAGCTTTTTTCGCTTCCTCCTTAATTGACCCCAGTTCCCGCCCGCACGAA
GGCTGGTTCTCCTTCGAGGGCGTTCCGTTGAAATGGCACTACCCAGTTGG
CCTCCTTTATGACCTTTATGCGGGAGCAGATCCTGCCTCTAAAGGAGGTG
CTGAAACTGACTTGTTATCCACAACGGATGAAGACCCGTTACCATGGCGT
CTAGTCGTGCATTTCAGCGACTGGCCTGATGAAGAGCTCGTCCGACTTGA
TGCAGAAGGGATAGTGATGCACGATGCTTTTATCAATAGTGTCAAAGAAG
CAGATTTCCTGAGGAATGGTACCGCCAAAGGAATCATGACCCTTTCCAGG
GAGGATTCGGCGGGGCTTTGGGAGTCAGTGAGAGATGTGGACCTTCCAAA
CTTCCAGCGAATATCCAACATTCTCCTACCACCCCAGTCACAACCGTTCC
GCAACATTCCTGTCCGGTTCTTTCTCCCCCTCCCCCCAGACTCAGACTCG
CCCTCTCTCAAAGTAGTCCAGTCTCCTATTCCACCAACCATTCAACCAAC
TCCCGGAAACAGCGCCAGTGTCATGGCAAGCCAATCCATATTGATCGAAG
GACACCTGTCCTGGCGAAACCAGTACTGCATGGTGCCGCTGTGCCCATGG
GGGCACCACTAGATGGAATCGAAAGCCACTCTGGGAAGTATCCAGAAAGC
CGTCTGGGCCGGAAAGCTGCCCTTACATATCACTCTGGCCCCATCAGAGA
GCCGTACATTTGACCAGACAGATCCATACCTAATCTCCTGTCCTCGCATA
TCATACTTACCATCGCTTCTCCCGAGGCTGAGAGCTTTTTTCGCTTCCTC
CTTAATTGACCCCAGTTCCCGCCCGCACGAAGGCTGGTTCTCCTTCGAGG
GCGTTCCGTTGAAATGGCACTACCCAGTTGGCCTCCTTTATGACCTTTAT
GCGGGAGCAGATCCTGCCTCTAAAGGAGGTGCTGAAACTGACTTGTTATC
CACAACGGATGAAGACCCGTTACCATGGCGTCTAGTCGTGCATTTCAGCG
ACTGGCCTGATGAAGAGCTCGTCCGACTTGATGCAGAAGGGATAGTGATG
CACGATGCTTTTATCAATAGTGTCAAAGAAGCAGATTTCCTGAGGAATGG
TACCGCCAAAGGAATCATGACCCTTTCCAGGGAGGATTCGGCGGGGCTTT
GGGAGTCAGTGAGAGATGTGGACCTTCCAAACTTCCAGCGAATATCCAAC
ATTCTCCTACCACCCCAGTCACAACCGTTCCGCAACATTCCTGTCCGGTT
CTTTCTCCCCCTCCCCCCAGACTCAGACTCGCCCTCTCTCAAAGTAGTCC
AGTCTCCTATTCCACCAACCATTCAACCAACTCCCGGAAACAGCGCCAGT
GTCATGGCAAGCCAATCCATATTGATCGAAGGACACCTGTCCTGGCGAAA
CCAGTACTGCATGGTGCCGCTGTGCCCATGGGGGCACCACTAGATGGAAT
CGAAAGCCACTCTGGGAAGTATCCAGAAAGCCGTCTGGGCCGGAAAGCTG
CCCTTACATATCACTCTGGCCCCATCAGAGAGCCGTACATTTGACCAGAC
AGATCCATACCTAATCTCCTGTCCTCGCATATCATACTTACCATCGCTTC
TCCCGAGGCTGAGAGCTTTTTTCGCTTCCTCCTTAATTGACCCCAGTTCC
CGCCCGCACGAAGGCTGGTTCTCCTTCGAGGGCGTTCCGTTGAAATGGCA
CTACCCAGTTGGCCTCCTTTATGACCTTTATGCGGGAGCAGATCCTGCCT
CTAAAGGAGGTGCTGAAACTGACTTGTTATCCACAACGGATGAAGACCCG
TTACCATGGCGTCTAGTCGTGCATTTCAGCGACTGGCCTGATGAAGAGCT
CGTCCGACTTGATGCAGAAGGGATAGTGATGCACGATGCTTTTATCAATA
GTGTCAAAGAAGCAGATTTCCTGAGGAATGGTACCGCCAAAGGAATCATG
ACCCTTTCCAGGGAGGATTCGGCGGGGCTTTGGGAGTCAGTGAGAGATGT
GGACCTTCCAAACTTCCAGCGAATATCCAACATTCTCCTACCACCCCAGT
CACAACCGTTCCGCAACATTCCTGTCCGGTTCTTTCTCCCCCTCCCCCCA
GACTCAGACTCGCCCTCTCTCAAAGTAGTCCAGTCTCCTATTCCACCAAC
CATTCAACCAACTCCCGGAAACAGCGCCAGTGTCATGGCAAGCCAATCCA
TATTGATCGAAGGACACCTGTCCTGGCGAAACCAGTACTGCATGGTGCCG
CTGTGCCCATGGGGGCACCACTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Biological Process
TermDefinition
GO:0006914autophagy
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATG5CAN33_3435Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_3435-T1.exon1CAN33_3435-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_3435-T1.exon2CAN33_3435-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_3435-T1.exon3CAN33_3435-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_3435-T1.exon4CAN33_3435-T1.exon4Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_3435-T1.cdsCAN33_3435-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_3435-T1CAN33_3435-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR042527
DBxrefInterPro:IPR042526
DBxrefInterPro:IPR007239
DBxrefPFAM:PF04106
Productautophagy protein 5
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000004.1supercontigNKJJ01000004.1:2189606..2190614 +
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