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CAN33_34865-T1, CAN33_34865-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_34865-T1
Unique NameCAN33_34865-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000007.1:1222539..1223166+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_34865-T1 ID=CAN33_34865-T1|Name=CAN33_34865-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=628bp|location=Sequence derived from alignment at NKJJ01000007.1:1222539..1223166+ (Aspergillus niger FDAARGOS_311)
ATGTCCGAGCAGCCCTATGATCCCTACATCCCCTCTGGCGCCAATGGGGC
TGGCGCCGGCGCCAGCGCTGCGCAAAATGGCGACCCCAGGACACGGGAAA
TCGACAAAGTAAGTTGCCGAAACGCCTCGCGGTCAACTTTTATCGTTCCA
CAAGGATATGTCGCCCAGGTTGAATAGGATGTGATGGCTTTCCAGTTTTC
ATTTGGACTTCCATCTGAGTTCAACTGGACTTGGAGGCCACCGGGTCTTT
TTGAATCTTATTAAGCTTGTGTCTATTATGGCATTTGTCGCAAAGTATTT
ACTAACGCTGTGTTTCTTCTCTGTCTAGAAAATCCAAGAAACCGTTGACA
CAATGCGCTCCAACATCTTTAAAGTTTCAGAACGTGGTGAACGTCTAGAT
TCCCTCCAGGACAAGACGGACAATTTGGCAACATCAGCGCAGGGATTCCG
CAGAGGTGCCAACCGCGTGAGGAAGCAAATGTGGTGGAAGGATATGAAGA
TGCGCGTGTGCCTAATCGTTTGTATCATTATTCTGCTCATTGTGATTATC
GTCCCTGCAGGTAAGATCAGCGCTATCCTCCAGCACTCCACCAAGCTGGA
CTCGGAAAAACATCCCGGAATGCGCTAA
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Coding sequence (CDS) from alignment at NKJJ01000007.1:1222539..1223166+

>CAN33_34865-T1 ID=CAN33_34865-T1|Name=CAN33_34865-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=816bp|location=Sequence derived from alignment at NKJJ01000007.1:1222539..1223166+ (Aspergillus niger FDAARGOS_311)
ATGTCCGAGCAGCCCTATGATCCCTACATCCCCTCTGGCGCCAATGGGGC
TGGCGCCGGCGCCAGCGCTGCGCAAAATGGCGACCCCAGGACACGGGAAA
TCGACAAAAAAATCCAAGAAACCGTTGACACAATGCGCTCCAACATCTTT
AAAGTTTCAGAACGTGGTGAACGTCTAGATTCCCTCCAGGACAAGACGGA
CAATTTGGCAACATCAGCGCAGGGATTCCGCAGAGGTGCCAACCGCGTGA
GGAAGCAAATGTGGTGGAAGGATATGAAGATGCGCGTGTGCCTAATCGTT
TGTATCATTATTCTGCTCATTGTGATTATCGTCCCTGCAGGTAAGATCAG
CGCTATCCTCCAGCACTCCACCAAGCTGGACTCGGAAAAACATCCCGGAA
TGCGCTAAATGTCCGAGCAGCCCTATGATCCCTACATCCCCTCTGGCGCC
AATGGGGCTGGCGCCGGCGCCAGCGCTGCGCAAAATGGCGACCCCAGGAC
ACGGGAAATCGACAAAAAAATCCAAGAAACCGTTGACACAATGCGCTCCA
ACATCTTTAAAGTTTCAGAACGTGGTGAACGTCTAGATTCCCTCCAGGAC
AAGACGGACAATTTGGCAACATCAGCGCAGGGATTCCGCAGAGGTGCCAA
CCGCGTGAGGAAGCAAATGTGGTGGAAGGATATGAAGATGCGCGTGTGCC
TAATCGTTTGTATCATTATTCTGCTCATTGTGATTATCGTCCCTGCAGGT
AAGATCAGCGCTATCCTCCAGCACTCCACCAAGCTGGACTCGGAAAAACA
TCCCGGAATGCGCTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0016192vesicle-mediated transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
SYB1CAN33_34865Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_34865-T1.exon1CAN33_34865-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_34865-T1.exon2CAN33_34865-T1.exon2Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_34865-T1.cdsCAN33_34865-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_34865-T1CAN33_34865-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR016444
DBxrefInterPro:IPR001388
DBxrefPFAM:PF00957
Product synaptobrevin
ProductSNAP receptor
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000007.1supercontigNKJJ01000007.1:1222539..1223166 +
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