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CAN33_34885-T1, CAN33_34885-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_34885-T1
Unique NameCAN33_34885-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000007.1:1236760..1238100-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_34885-T1 ID=CAN33_34885-T1|Name=CAN33_34885-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1341bp|location=Sequence derived from alignment at NKJJ01000007.1:1236760..1238100- (Aspergillus niger FDAARGOS_311)
ATGAATCGCCTTCCGGACGAGATTCTCCTCCTTATTGTTGACAACATCGT
CTTGTTCAAACATAAATACCAGTTTCTCCAGGTTTGTCGCCGTTGGCGGT
CAGTCCTATTCAAGGCGGTCTACGACTATGTCTGGATAGAGGGACATCAG
ATTCGCCCTCTTCTCTTGGCCATCCAGCAGAACCCCGCGATAGGATCTTC
CATCAAATATTTCAGGTTGCACTGGTGGTCCTGCTATACATGGGATAAGG
AGAATCACGATATCACTTCTGTTCTACCGCTTGTGAATCGGATTAGCCAA
TCAGAGGAGGAAACGAAAGAATGGGAGGAAGCTTTGATAGAGGGCAATCA
GGATGCATGGCTTGGCCTACTGCTCTTGCACATGGAGAACATGACAAGCT
TGTTAATGCATTATACAAGGCAACCCAAATTTCTCCGTCGAGTTATCTCA
CGCGCCGCAATACGTGAGAAGCCATTTGACACGATGCCAATTCTACAGCA
ACTGGTCGATGTCGGGATTGACTCCTCGGACGACAATAAAGCATGGTTCC
ACAAGACTGAATTTCTCCCCTTCTTCCATCTTCCGGCTCTGCGGTCCGTG
AGCCTGGACTCCGTGGTTGAGTCAATGGGTGTTCAAATTGACCACCCGGC
TTTCAAGCCTGCCAAGGGTACCTCTCCAGTTGTCGAACTCGAGTTTGGTG
CACACCCTAATGGCAGTAAGGGCATGGCGGACTTTATTACATCATGTGCG
AACCTCGAGAAATTCAAATATCAACACTCAAATCAGGTGATATGGGGAGA
ACGATATATGAACTTCCGTCCTCGGGCATTCTACTCTGCGCTTTGTACGC
AAAAGCACAGCTTGCAGGTCCTTCATTTGAACGACGGAGGGGAGACGCAG
CAATCTCTTGACGACGACGACGATGATGATGATGATGACGCGAGCGTTCC
CCCAACCGACTGGTTCGGGTCATTGGCGGATTTCACTAAGCTATGGGATC
TCCGGATTCCTGCCTCCACATTGTTGAATTTCCACTTGAGTGATGACAAA
CCAAAAGTATCGTCGCTCAAAGAGATCTTGCCGTCTAGTTTGAAATGGCT
TTGTCTGTCGCATTATGAAGACTCCCTGAGGGATCAAGTCATATCCAATC
TGCTGGAGGTGGTGGCTTGTCGGAAAGAGAAGTTTCCGTATCTCGAGGAA
GTGGAGATCCAGTCATATTGGCAGAATACTCGTGAGAGTTTATCTGCCAA
GCAGGCTTTTACGCCACTGATTCAAGCTGGTGAAGATGTGGGGATCGATA
TCCTTGTATTTCCTTCATTCTACAGACAAAGGAGAGCGTAG
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Coding sequence (CDS) from alignment at NKJJ01000007.1:1236760..1238100-

>CAN33_34885-T1 ID=CAN33_34885-T1|Name=CAN33_34885-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2256bp|location=Sequence derived from alignment at NKJJ01000007.1:1236760..1238100- (Aspergillus niger FDAARGOS_311)
TATCGTCGCTCAAAGAGATCTTGCCGTCTAGTTTGAAATGGCTTTGTCTG
TCGCATTATGAAGACTCCCTGAGGGATCAAGTCATATCCAATCTGCTGGA
GGTGGTGGCTTGTCGGAAAGAGAAGTTTCCGTATCTCGAGGAAGTGGAGA
TCCAGTCATATTGGCAGAATACTCGTGAGAGTTTATCTGCCAAGCAGGCT
TTTACGCCACTGATTCAAGCTGGTGAAGATGTGGGGATCGATATCCTTGT
ATTTCCTTCATTCTACAGACAAAGGAGAGCGTAGATGAATCGCCTTCCGG
ACGAGATTCTCCTCCTTATTGTTGACAACATCGTCTTGTTCAAACATAAA
TACCAGTTTCTCCAGGTTTGTCGCCGTTGGCGGTCAGTCCTATTCAAGGC
GGTCTACGACTATGTCTGGATAGAGGGACATCAGATTCGCCCTCTTCTCT
TGGCCATCCAGCAGAACCCCGCGATAGGATCTTCCATCAAATATTTCAGG
TTGCACTGGTGGTCCTGCTATACATGGGATAAGGAGAATCACGATATCAC
TTCTGTTCTACCGCTTGTGAATCGGATTAGCCAATCAGAGGAGGAAACGA
AAGAATGGGAGGAAGCTTTGATAGAGGGCAATCAGGATGCATGGCTTGGC
CTACTGCTCTTGCACATGGAGAACATGACAAGCTTGTTAATGCATTATAC
AAGGCAACCCAAATTTCTCCGTCGAGTTATCTCACGCGCCGCAATACGTG
AGAAGCCATTTGACACGATGCCAATTCTACAGCAACTGGTCGATGTCGGG
ATTGACTCCTCGGACGACAATAAAGCATGGTTCCACAAGACTGAATTTCT
CCCCTTCTTCCATCTTCCGGCTCTGCGGTCCGTGAGCCTGGACTCCGTGG
TTGAGTCAATGGGTGTTCAAATTGACCACCCGGCTTTCAAGCCTGCCAAG
GGTACCTCTCCAGTTGTCGAACTCGAGTTTGGTGCACACCCTAATGGCAG
TAAGGGCATGGCGGACTTTATTACATCATGTGCGAACCTCGAGAAATTCA
AATATCAACACTCAAATCAGGTGATATGGGGAGAACGATATATGAACTTC
CGTCCTCGGGCATTCTACTCTGCGCTTTTATCGTCGCTCAAAGAGATCTT
GCCGTCTAGTTTGAAATGGCTTTGTCTGTCGCATTATGAAGACTCCCTGA
GGGATCAAGTCATATCCAATCTGCTGGAGGTGGTGGCTTGTCGGAAAGAG
AAGTTTCCGTATCTCGAGGAAGTGGAGATCCAGTCATATTGGCAGAATAC
TCGTGAGAGTTTATCTGCCAAGCAGGCTTTTACGCCACTGATTCAAGCTG
GTGAAGATGTGGGGATCGATATCCTTGTATTTCCTTCATTCTACAGACAA
AGGAGAGCGTAGATGAATCGCCTTCCGGACGAGATTCTCCTCCTTATTGT
TGACAACATCGTCTTGTTCAAACATAAATACCAGTTTCTCCAGGTTTGTC
GCCGTTGGCGGTCAGTCCTATTCAAGGCGGTCTACGACTATGTCTGGATA
GAGGGACATCAGATTCGCCCTCTTCTCTTGGCCATCCAGCAGAACCCCGC
GATAGGATCTTCCATCAAATATTTCAGGTTGCACTGGTGGTCCTGCTATA
CATGGGATAAGGAGAATCACGATATCACTTCTGTTCTACCGCTTGTGAAT
CGGATTAGCCAATCAGAGGAGGAAACGAAAGAATGGGAGGAAGCTTTGAT
AGAGGGCAATCAGGATGCATGGCTTGGCCTACTGCTCTTGCACATGGAGA
ACATGACAAGCTTGTTAATGCATTATACAAGGCAACCCAAATTTCTCCGT
CGAGTTATCTCACGCGCCGCAATACGTGAGAAGCCATTTGACACGATGCC
AATTCTACAGCAACTGGTCGATGTCGGGATTGACTCCTCGGACGACAATA
AAGCATGGTTCCACAAGACTGAATTTCTCCCCTTCTTCCATCTTCCGGCT
CTGCGGTCCGTGAGCCTGGACTCCGTGGTTGAGTCAATGGGTGTTCAAAT
TGACCACCCGGCTTTCAAGCCTGCCAAGGGTACCTCTCCAGTTGTCGAAC
TCGAGTTTGGTGCACACCCTAATGGCAGTAAGGGCATGGCGGACTTTATT
ACATCATGTGCGAACCTCGAGAAATTCAAATATCAACACTCAAATCAGGT
GATATGGGGAGAACGATATATGAACTTCCGTCCTCGGGCATTCTACTCTG
CGCTTT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_34885CAN33_34885Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_34885-T1CAN33_34885-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_34885-T1.cdsCAN33_34885-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_34885-T1.exon2CAN33_34885-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_34885-T1.exon1CAN33_34885-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR001810
DBxrefPFAM:PF12937
ProductF-box-like family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000007.1supercontigNKJJ01000007.1:1236760..1238100 -
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