You are here

Home

CAN33_34955-T1, CAN33_34955-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_34955-T1
Unique NameCAN33_34955-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000007.1:1273488..1276649+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_34955-T1 ID=CAN33_34955-T1|Name=CAN33_34955-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=3162bp|location=Sequence derived from alignment at NKJJ01000007.1:1273488..1276649+ (Aspergillus niger FDAARGOS_311)
ATGGCATCTATTGTCAATTTCATCTCGAATGTGCTCCTCCGCCCTGTGGA
GTCCTACTGCAGCTTCGGTCCGACGGTGAGTGAAATCACCTTTGGACAGC
TGGGGTACTCCTTCAATCCCGAACGCGACATCAATGATCTGTCAGGGAAG
GTTGTCTTCGTCACTGGAGGTATGTCATCTCTATACCTTGGGCTGTCTAT
CTCAGTGCGCTAACTTCTCCGCTTGTTTCGTAGGAAATGCCGGTCTAGGA
AAAGAAACCATCCTCCAACTCGCCCATCACCGCCCATCTCGCATCTACCT
TGGTGCACGGAATGCGATCAAAGCCGAAGATGCCATCGCTTCAATCCGGG
AGCAGGTTCCATCCGCCGATATCAGACACATATCCCTCGACCTGTCCTCA
TTCAAGTCGATCCGTGCCGCTGCCGAGCAGTTCACGTCAGAATGCGATCG
CCTGGACCTCTTGATCCTTAACGCGGGAATCATGAACTGCCCGCCTGCCC
TGACAGAGGAAGGATTCGAGATACAATTCGGGACGAATCATATCGGGCAT
TTCCTACTTACCCAGCTACTACTACCCACACTGCAACGAACGGTTGATCT
TTCCAGGGATGTTCGTGTAGTAACGTTGTCCTCTGCCGCGAATGTCGCCG
CGCCTCCCTTCGAAGTCATGACTTCTACGCCGGCTTTACTAGCGGATCAC
ACATTGGCCCGATACTGTTCATCAAAGGCAGCGAATATCCTTTTTGCGTC
GGAGCTGGCTCGTCGCCATCCGGAGATTCTGTCTGTCGCGGTACATCCCG
GCTCCGTCGTGAGCGACCTATGGGATCATTCGATCAAGACGAGTGTCGTC
GCCAAATACAGTATCGGCGCTCTTCTGGCGTTCAGTCGGGGCATACGGAG
CGGAGCACTCAACCAACTCTGGGCCGCAGGGGCGAGAAGAGAATTGCTGA
CCAACGGAGCTTATTATGTTCCCATTGGGGTACACGCTACGGGCAACCGG
TACGCAAGGGACGCCGATATGGCACGGCGACTGTGGGAGTGGACTGAGCA
GCAGATTGCGGACAAATCGTAACCTTATCCGGTTCCAATGATGTTTTGGT
CTTCCCCCACCTCAGCCCCTGTATCTAGAGATCGACGAATTAGCCCAGGA
TATGCGTGGCTATGTCTTGGAAACAACACTGTGACTGTCATAATAAAGCA
AATAATCGAAACCTATGGAATAACATGATGCGATACTGGACGTTGCTTCA
GGGTCCGGATCGCGGGGTTGATGACGGGTAAACTCGCAGATTACCGGATT
CGGTATGAGATGCCGGAAAGCGGGTGGTGAGCGTCAATCCCGGCGAGACT
CATTGGCGGCCACAAACTGTCCCAAGGTGCCAAACAACCTCTCAAGAAAA
AGGGACCAACCTACTCCCCATAGAAAAAAATATTCCTAGTTCAACGTCCC
AGCCACTTTCACTATCCCTCTATGACATTTTGAAAGTTGCCGATCTCCCT
CCATGGACGCCAGTCTAGAAAGTCAGCAGCGGCAGCGATCGTTAGGGTTT
AGCCGAGGAGCCTCCCTGTCCAGATTCCTCGTTTCGCCCACAACCAACTT
CACCCAGCAGGTCCACGAAGCGCCTTTCCAATGAAAATTGTAATCCCATA
GCCAGAAAGCACATATTATAACCATAGTATATAGAACAATAATCTAATTA
CTACTGAGCGAGCTACACTGTGTAGAAAATAATATTAATGTCGTAGAAGT
ACTGAGAACGCAAAGTCGGCTTTGCATGCTCTGCTCCCCACACAAACCCG
TCCGAAGCGCATCATCGAACTTGACTATCCTCATCCTCATCCTCCCACTT
CACCTCCCTCCTCTTTCTCTCTCCAGCACCAAATCTCTCCCCCATCATCT
CCTTTAGGTACGTATTATACCCCGTTATTCCTACCTCTAGAACCCGTTTT
CCCTTGGAACATTTCGGAATCTTTTTATCTGTCGCCCATCGACGAGTCAT
CCGCGAAACTCTGTCCCGAATTTATTCGTTCCAATTTCAATTCGATCCGG
TCGCGCGAATTCGACGCTCAACGCTCCGCTTCCTCCGTTTACGCGAGAAT
GACACAGCACAATTTCCACAATACACTCAAAATTTTACGAGGACAGACAT
CTGACCGTCTTTGGATTTTTTTCACAGGTTGAAAGCACTCAAGCTTCAAT
ACTCCCGTCAAAATGGATCAGGCAAAGTTGGCTAGAATGCAGCAGAGCGT
GCGGATTGGTATGTACCTCTATATTCTTTTCGTGTTTTCTTGTTAAGCTC
TCTTGTGTTATTGCTATTGCTCCGTTCGCATCCGATTTATAATCAATACC
CATGGGAGCGAGATTGGTGGGGGTGAGCGAGGGAAGCTATCCGGTGGTAT
TATGGGATCGATCTCGATCCGATTCTGCAAGGAACGAAAGGGGAGGTGGA
GCAAAACAGCTGGGCTTGAAAGATCAAGACCATGTCGGATTGCTTTATAT
TGTTGCGTTGCGTGTTATTGTTGTTTTTAAACGAAGTTATGACGAACAGC
TAAAGCTAACATATCTTTCTCAACCTCACAGGGTACGTATAATGACACAG
TCGCATCCCACGAGACACAAATCGAGATCAGAACCTACGAATCGAAACTA
ACAACTCAACAGAGGCAAGGGTACTCCCCGCCGCAAGGTCAAGAAGGTCC
ACAAGTCCTCCGGTGCCGACGACAAGAAGCTCCAGGCCACCCTGAAGAAG
ATGAACGTCCAGCCCATCCAGGCCATCGAGGAGGTTAACATGTTCAAGGA
GGACGGAAACGTCATCCACTTTGGTGCTCCTAAGGGTATATAGTCCCCAC
ACCTTTACCCAACATCTCACATAAGGAATTCCCCAGACCACTGACATGAT
TTCGGTTGGTATAGTCCACGCCTCCGTCCCCTCCAACACCTTCGCCCTCT
ACGGCAACGGCGAGGAGAAGGAGCTCACCGAGCTCGTCCCCGGTATCCTG
AACCAGCTTGGCCCCGACAGCCTTGCTTCCCTCCGCAAGCTTGCCGAGAG
CTACCAGAACATGCAGAAGAACCAGGCCGGCGCTGACGGCAAGAAGGACG
ATGAGGAGGATGATATCCCCGATCTCGTCGAGGGCGAGAACTTCGAGAGC
AACGTTGAGTAA
back to top

Coding sequence (CDS) from alignment at NKJJ01000007.1:1273488..1276649+

>CAN33_34955-T1 ID=CAN33_34955-T1|Name=CAN33_34955-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=5700bp|location=Sequence derived from alignment at NKJJ01000007.1:1273488..1276649+ (Aspergillus niger FDAARGOS_311)
ATGGCATCTATTGTCAATTTCATCTCGAATGTGCTCCTCCGCCCTGTGGA
GTCCTACTGCAGCTTCGGTCCGACGGTGAGTGAAATCACCTTTGGACAGC
TGGGGTACTCCTTCAATCCCGAACGCGACATCAATGATCTGTCAGGGAAG
GTTGTCTTCGTCACTGGAGGAAATGCCGGTCTAGGAAAAGAAACCATCCT
CCAACTCGCCCATCACCGCCCATCTCGCATCTACCTTGGTGCACGGAATG
CGATCAAAGCCGAAGATGCCATCGCTTCAATCCGGGAGCAGGTTCCATCC
GCCGATATCAGACACATATCCCTCGACCTGTCCTCATTCAAGTCGATCCG
TGCCGCTGCCGAGCAGTTCACGTCAGAATGCGATCGCCTGGACCTCTTGA
TCCTTAACGCGGGAATCATGAACTGCCCGCCTGCCCTGACAGAGGAAGGA
TTCGAGATACAATTCGGGACGAATCATATCGGGCATTTCCTACTTACCCA
GCTACTACTACCCACACTGCAACGAACGGTTGATCTTTCCAGGGATGTTC
GTGTAGTAACGTTGTCCTCTGCCGCGAATGTCGCCGCGCCTCCCTTCGAA
GTCATGACTTCTACGCCGGCTTTACTAGCGGATCACACATTGGCCCGATA
CTGTTCATCAAAGGCAGCGAATATCCTTTTTGCGTCGGAGCTGGCTCGTC
GCCATCCGGAGATTCTGTCTGTCGCGGTACATCCCGGCTCCGTCGTGAGC
GACCTATGGGATCATTCGATCAAGACGAGTGTCGTCGCCAAATACAGTAT
CGGCGCTCTTCTGGCGTTCAGTCGGGGCATACGGAGCGGAGCACTCAACC
AACTCTGGGCCGCAGGGGCGAGAAGAGAATTGCTGACCAACGGAGCTTAT
TATGTTCCCATTGGGGTACACGCTACGGGCAACCGGTACGCAAGGGACGC
CGATATGGCACGGCGACTGTGGGAGTGGACTGAGCAGCAGATTGCGGACA
AATCAGGCAAGGGTACTCCCCGCCGCAAGGTCAAGAAGGTCCACAAGTCC
TCCGGTGCCGACGACAAGAAGCTCCAGGCCACCCTGAAGAAGATGAACGT
CCAGCCCATCCAGGCCATCGAGGAGGTTAACATGTTCAAGGAGGACGGAA
ACGTCATCCACTTTGGTGCTCCTAAGGTCCACGCCTCCGTCCCCTCCAAC
ACCTTCGCCCTCTACGGCAACGGCGAGGAGAAGGAGCTCACCGAGCTCGT
CCCCGGTATCCTGAACCAGCTTGGCCCCGACAGCCTTGCTTCCCTCCGCA
AGCTTGCCGAGAGCTACCAGAACATGCAGAAGAACCAGGCCGGCGCTGAC
GGCAAGAAGGACGATGAGGAGGATGATATCCCCGATCTCGTCGAGGGCGA
GAACTTCGAGAGCAACGTTGAGTAAATGGCATCTATTGTCAATTTCATCT
CGAATGTGCTCCTCCGCCCTGTGGAGTCCTACTGCAGCTTCGGTCCGACG
GTGAGTGAAATCACCTTTGGACAGCTGGGGTACTCCTTCAATCCCGAACG
CGACATCAATGATCTGTCAGGGAAGGTTGTCTTCGTCACTGGAGGAAATG
CCGGTCTAGGAAAAGAAACCATCCTCCAACTCGCCCATCACCGCCCATCT
CGCATCTACCTTGGTGCACGGAATGCGATCAAAGCCGAAGATGCCATCGC
TTCAATCCGGGAGCAGGTTCCATCCGCCGATATCAGACACATATCCCTCG
ACCTGTCCTCATTCAAGTCGATCCGTGCCGCTGCCGAGCAGTTCACGTCA
GAATGCGATCGCCTGGACCTCTTGATCCTTAACGCGGGAATCATGAACTG
CCCGCCTGCCCTGACAGAGGAAGGATTCGAGATACAATTCGGGACGAATC
ATATCGGGCATTTCCTACTTACCCAGCTACTACTACCCACACTGCAACGA
ACGGTTGATCTTTCCAGGGATGTTCGTGTAGTAACGTTGTCCTCTGCCGC
GAATGTCGCCGCGCCTCCCTTCGAAGTCATGACTTCTACGCCGGCTTTAC
TAGCGGATCACACATTGGCCCGATACTGTTCATCAAAGGCAGCGAATATC
CTTTTTGCGTCGGAGCTGGCTCGTCGCCATCCGGAGATTCTGTCTGTCGC
GGTACATCCCGGCTCCGTCGTGAGCGACCTATGGGATCATTCGATCAAGA
CGAGTGTCGTCGCCAAATACAGTATCGGCGCTCTTCTGGCGTTCAGTCGG
GGCATACGGAGCGGAGCACTCAACCAACTCTGGGCCGCAGGGGCGAGAAG
AGAATTGCTGACCAACGGAGCTTATTATGTTCCCATTGGGGTACACGCTA
CGGGCAACCGGTACGCAAGGGACGCCGATATGGCACGGCGACTGTGGGAG
TGGACTGAGCAGCAGATTGCGGACAAATCAGGCAAGGGTACTCCCCGCCG
CAAGGTCAAGAAGGTCCACAAGTCCTCCGGTGCCGACGACAAGAAGCTCC
AGGCCACCCTGAAGAAGATGAACGTCCAGCCCATCCAGGCCATCGAGGAG
GTTAACATGTTCAAGGAGGACGGAAACGTCATCCACTTTGGTGCTCCTAA
GGTCCACGCCTCCGTCCCCTCCAACACCTTCGCCCTCTACGGCAACGGCG
AGGAGAAGGAGCTCACCGAGCTCGTCCCCGGTATCCTGAACCAGCTTGGC
CCCGACAGCCTTGCTTCCCTCCGCAAGCTTGCCGAGAGCTACCAGAACAT
GCAGAAGAACCAGGCCGGCGCTGACGGCAAGAAGGACGATGAGGAGGATG
ATATCCCCGATCTCGTCGAGGGCGAGAACTTCGAGAGCAACGTTGAGTAA
ATGGCATCTATTGTCAATTTCATCTCGAATGTGCTCCTCCGCCCTGTGGA
GTCCTACTGCAGCTTCGGTCCGACGGTGAGTGAAATCACCTTTGGACAGC
TGGGGTACTCCTTCAATCCCGAACGCGACATCAATGATCTGTCAGGGAAG
GTTGTCTTCGTCACTGGAGGAAATGCCGGTCTAGGAAAAGAAACCATCCT
CCAACTCGCCCATCACCGCCCATCTCGCATCTACCTTGGTGCACGGAATG
CGATCAAAGCCGAAGATGCCATCGCTTCAATCCGGGAGCAGGTTCCATCC
GCCGATATCAGACACATATCCCTCGACCTGTCCTCATTCAAGTCGATCCG
TGCCGCTGCCGAGCAGTTCACGTCAGAATGCGATCGCCTGGACCTCTTGA
TCCTTAACGCGGGAATCATGAACTGCCCGCCTGCCCTGACAGAGGAAGGA
TTCGAGATACAATTCGGGACGAATCATATCGGGCATTTCCTACTTACCCA
GCTACTACTACCCACACTGCAACGAACGGTTGATCTTTCCAGGGATGTTC
GTGTAGTAACGTTGTCCTCTGCCGCGAATGTCGCCGCGCCTCCCTTCGAA
GTCATGACTTCTACGCCGGCTTTACTAGCGGATCACACATTGGCCCGATA
CTGTTCATCAAAGGCAGCGAATATCCTTTTTGCGTCGGAGCTGGCTCGTC
GCCATCCGGAGATTCTGTCTGTCGCGGTACATCCCGGCTCCGTCGTGAGC
GACCTATGGGATCATTCGATCAAGACGAGTGTCGTCGCCAAATACAGTAT
CGGCGCTCTTCTGGCGTTCAGTCGGGGCATACGGAGCGGAGCACTCAACC
AACTCTGGGCCGCAGGGGCGAGAAGAGAATTGCTGACCAACGGAGCTTAT
TATGTTCCCATTGGGGTACACGCTACGGGCAACCGGTACGCAAGGGACGC
CGATATGGCACGGCGACTGTGGGAGTGGACTGAGCAGCAGATTGCGGACA
AATCAGGCAAGGGTACTCCCCGCCGCAAGGTCAAGAAGGTCCACAAGTCC
TCCGGTGCCGACGACAAGAAGCTCCAGGCCACCCTGAAGAAGATGAACGT
CCAGCCCATCCAGGCCATCGAGGAGGTTAACATGTTCAAGGAGGACGGAA
ACGTCATCCACTTTGGTGCTCCTAAGGTCCACGCCTCCGTCCCCTCCAAC
ACCTTCGCCCTCTACGGCAACGGCGAGGAGAAGGAGCTCACCGAGCTCGT
CCCCGGTATCCTGAACCAGCTTGGCCCCGACAGCCTTGCTTCCCTCCGCA
AGCTTGCCGAGAGCTACCAGAACATGCAGAAGAACCAGGCCGGCGCTGAC
GGCAAGAAGGACGATGAGGAGGATGATATCCCCGATCTCGTCGAGGGCGA
GAACTTCGAGAGCAACGTTGAGTAAATGGCATCTATTGTCAATTTCATCT
CGAATGTGCTCCTCCGCCCTGTGGAGTCCTACTGCAGCTTCGGTCCGACG
GTGAGTGAAATCACCTTTGGACAGCTGGGGTACTCCTTCAATCCCGAACG
CGACATCAATGATCTGTCAGGGAAGGTTGTCTTCGTCACTGGAGGAAATG
CCGGTCTAGGAAAAGAAACCATCCTCCAACTCGCCCATCACCGCCCATCT
CGCATCTACCTTGGTGCACGGAATGCGATCAAAGCCGAAGATGCCATCGC
TTCAATCCGGGAGCAGGTTCCATCCGCCGATATCAGACACATATCCCTCG
ACCTGTCCTCATTCAAGTCGATCCGTGCCGCTGCCGAGCAGTTCACGTCA
GAATGCGATCGCCTGGACCTCTTGATCCTTAACGCGGGAATCATGAACTG
CCCGCCTGCCCTGACAGAGGAAGGATTCGAGATACAATTCGGGACGAATC
ATATCGGGCATTTCCTACTTACCCAGCTACTACTACCCACACTGCAACGA
ACGGTTGATCTTTCCAGGGATGTTCGTGTAGTAACGTTGTCCTCTGCCGC
GAATGTCGCCGCGCCTCCCTTCGAAGTCATGACTTCTACGCCGGCTTTAC
TAGCGGATCACACATTGGCCCGATACTGTTCATCAAAGGCAGCGAATATC
CTTTTTGCGTCGGAGCTGGCTCGTCGCCATCCGGAGATTCTGTCTGTCGC
GGTACATCCCGGCTCCGTCGTGAGCGACCTATGGGATCATTCGATCAAGA
CGAGTGTCGTCGCCAAATACAGTATCGGCGCTCTTCTGGCGTTCAGTCGG
GGCATACGGAGCGGAGCACTCAACCAACTCTGGGCCGCAGGGGCGAGAAG
AGAATTGCTGACCAACGGAGCTTATTATGTTCCCATTGGGGTACACGCTA
CGGGCAACCGGTACGCAAGGGACGCCGATATGGCACGGCGACTGTGGGAG
TGGACTGAGCAGCAGATTGCGGACAAATCAGGCAAGGGTACTCCCCGCCG
CAAGGTCAAGAAGGTCCACAAGTCCTCCGGTGCCGACGACAAGAAGCTCC
AGGCCACCCTGAAGAAGATGAACGTCCAGCCCATCCAGGCCATCGAGGAG
GTTAACATGTTCAAGGAGGACGGAAACGTCATCCACTTTGGTGCTCCTAA
GGTCCACGCCTCCGTCCCCTCCAACACCTTCGCCCTCTACGGCAACGGCG
AGGAGAAGGAGCTCACCGAGCTCGTCCCCGGTATCCTGAACCAGCTTGGC
CCCGACAGCCTTGCTTCCCTCCGCAAGCTTGCCGAGAGCTACCAGAACAT
GCAGAAGAACCAGGCCGGCGCTGACGGCAAGAAGGACGATGAGGAGGATG
ATATCCCCGATCTCGTCGAGGGCGAGAACTTCGAGAGCAACGTTGAGTAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_34955CAN33_34955Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_34955-T1.exon1CAN33_34955-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_34955-T1.exon2CAN33_34955-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_34955-T1.exon3CAN33_34955-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_34955-T1.exon4CAN33_34955-T1.exon4Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_34955-T1.cdsCAN33_34955-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_34955-T1CAN33_34955-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteBUSCO:EOG092653SU
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR038187
DBxrefInterPro:IPR002715
DBxrefInterPro:IPR002347
DBxrefPFAM:PF01849
DBxrefPFAM:PF08659
DBxrefPFAM:PF13561
DBxrefPFAM:PF00106
ProductNAC domain family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000007.1supercontigNKJJ01000007.1:1273488..1276649 +
Powered by Drupal