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CAN33_35000-T1, CAN33_35000-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_35000-T1
Unique NameCAN33_35000-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000007.1:1296575..1297956-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_35000-T1 ID=CAN33_35000-T1|Name=CAN33_35000-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1382bp|location=Sequence derived from alignment at NKJJ01000007.1:1296575..1297956- (Aspergillus niger FDAARGOS_311)
ATGTTGGTCTCCTTGACAGTCGGCAAGGTAGACGCAGGAGTCGCTGTACT
CTTGACCCAGGACAACAGACTGGTGAGTTCAATTTCCATCCCCACACACT
TACAGCAAGCGATTGACGCACGAGCCTGCACGATATTGCCTCAAAATAAT
CCACTCTTCTTTCAGAGTAGCCCTGATACTCAACTAACCCGCCCCAGATC
GAATTTCCCTCCGTCCTTCTCCCCAGCAACATCACGTCCGGTAGTATCGT
CGACATCACCGTCGCGCGCAACCACACAGCCGAATCCGCCAGTGCCGCCA
ACTTCCAGTCGCTCCAAAAACGCATCCTCAATACCTACGGCATCAAGACC
CCCACACCCCCGGTTCTCCGTCTCCGCAACGCAACTCAAACTTCCCTCGT
CTTGGAATGGGAACCTATTGACCTAGCCACCGCATCCCTGAAATCACTCT
CCCTGTACCGCAATGGCTCTAAAGCCGGATCCATTCCCCGTCCGCTTGAG
ACGCGAAGCACCAAAATTAGCGGTCTAGCCATCCACACCGAATACACCTT
CCATCTCGTCCTGCGCACCACCGCCGGCACCTACCAGTCGGAGAAGCTGA
CTTGCCGCACGCACAAGATGACGGATCTCTCCGGTATCACGGTGACGGCG
GGTGTCCTTCCCCCGCAACAGAAGGATGCTCTTGCAGCTGCGTTGGATCG
CATCGGTGGAAAGCTGATCGACTCGGTCCGCATTGATACCACCCACTTTG
TCTGTACGGAGGGGAGAGGCCCGCTCTGGGAGAAGGCGGTTGAGATGAAT
ATTCCCGTGGTCGTTCCGGAGTGGGTGGATGCTTGCGAGGCCGAAGGCAC
TATTGTCAGTGTTCGCGGGTATTACCTGAATGCTGACCCCAAGGCAAGAC
AGCTGGGCCCGATTCACAGCTCTACGCAGCATCAGCGAACGGTTTCTACT
GCCACCTCGAACCTGGCGCCCCCGGCTGCGCAGGCTCAGACCCCATCACG
GCAGGCGGCGCAGGAAGACGAGCAGAACGTTGAGCCTCCGGTTACGCCGT
TCCCGGGAGCCGAGATGACCGGCCAGCCCATCGCGGAAGAGAAGGAGGTG
GGATCGGACGAGAGTACAGAGTCGCCGCCACCTCCACCTCCGAAGGATGA
AGAAAAGGAGGATGAAACTGCCGAGCAGAATGGTGATCACGAGACACCGC
CATCTCCGCCGGAGAAGGACGAGGACGAGGGCGAAGGCAAGGACGAGGAA
GAGAAGACCGAAGAGAACACGCGAGAGCAAGAAGAGGAAGAGGAAGAGGA
AGAGAAAGGCGACTCATCAAATACCAAAGAGCGCAAATCAAAGGAGGGTG
GAGAAGGGGACTTTAATGAAGTCCCTCTGTAA
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Coding sequence (CDS) from alignment at NKJJ01000007.1:1296575..1297956-

>CAN33_35000-T1 ID=CAN33_35000-T1|Name=CAN33_35000-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3330bp|location=Sequence derived from alignment at NKJJ01000007.1:1296575..1297956- (Aspergillus niger FDAARGOS_311)
AGCGCAAATCAAAGGAGGGTGGAGAAGGGGACTTTAATGAAGTCCCTCTG
TAAATCGAATTTCCCTCCGTCCTTCTCCCCAGCAACATCACGTCCGGTAG
TATCGTCGACATCACCGTCGCGCGCAACCACACAGCCGAATCCGCCAGTG
CCGCCAACTTCCAGTCGCTCCAAAAACGCATCCTCAATACCTACGGCATC
AAGACCCCCACACCCCCGGTTCTCCGTCTCCGCAACGCAACTCAAACTTC
CCTCGTCTTGGAATGGGAACCTATTGACCTAGCCACCGCATCCCTGAAAT
CACTCTCCCTGTACCGCAATGGCTCTAAAGCCGGATCCATTCCCCGTCCG
CTTGAGACGCGAAGCACCAAAATTAGCGGTCTAGCCATCCACACCGAATA
CACCTTCCATCTCGTCCTGCGCACCACCGCCGGCACCTACCAGTCGGAGA
AGCTGACTTGCCGCACGCACAAGATGACGGATCTCTCCGGTATCACGGTG
ACGGCGGGTGTCCTTCCCCCGCAACAGAAGGATGCTCTTGCAGCTGCGTT
GGATCGCATCGGTGGAAAGCTGATCGACTCGGTCCGCATTGATACCACCC
ACTTTGTCTGTACGGAGGGGAGAGGCCCGCTCTGGGAGAAGGCGGTTGAG
ATGAATATTCCCGTGGTCGTTCCGGAGTGGGTGGATGCTTGCGAGGCCGA
AGGCACTATTGTCAGTGTTCGCGGGTATTACCTGAATGCTGACCCCAAGG
CAAGACAGCTGGGCCCGATTCACAGCTCTACGCAGCATCAGCGAACGGTT
TCTACTGCCACCTCGAACCTGGCGCCCCCGGCTGCGCAGGCTCAGACCCC
ATCACGGCAGGCGGCGCAGGAAGACGAGCAGAACGTTGAGCCTCCGGTTA
CGCCGTTCCCGGGAGCCGAGATGACCGGCCAGCCCATCGCGGAAGAGAAG
GAGGTGGGATCGGACGAGAGTACAGAGTCGCCGCCACCTCCACCTCCGAA
GGATGAAGAAAAGGAGGATGAAACTGCCGAGCAGAATGATGTTGGTCTCC
TTGACAGTCGGCAAGGTAGACGCAGGAGTCGCTGTACTCTTGACCCAGGA
CAACAGACTGAGCGCAAATCAAAGGAGGGTGGAGAAGGGGACTTTAATGA
AGTCCCTCTGTAAATCGAATTTCCCTCCGTCCTTCTCCCCAGCAACATCA
CGTCCGGTAGTATCGTCGACATCACCGTCGCGCGCAACCACACAGCCGAA
TCCGCCAGTGCCGCCAACTTCCAGTCGCTCCAAAAACGCATCCTCAATAC
CTACGGCATCAAGACCCCCACACCCCCGGTTCTCCGTCTCCGCAACGCAA
CTCAAACTTCCCTCGTCTTGGAATGGGAACCTATTGACCTAGCCACCGCA
TCCCTGAAATCACTCTCCCTGTACCGCAATGGCTCTAAAGCCGGATCCAT
TCCCCGTCCGCTTGAGACGCGAAGCACCAAAATTAGCGGTCTAGCCATCC
ACACCGAATACACCTTCCATCTCGTCCTGCGCACCACCGCCGGCACCTAC
CAGTCGGAGAAGCTGACTTGCCGCACGCACAAGATGACGGATCTCTCCGG
TATCACGGTGACGGCGGGTGTCCTTCCCCCGCAACAGAAGGATGCTCTTG
CAGCTGCGTTGGATCGCATCGGTGGAAAGCTGATCGACTCGGTCCGCATT
GATACCACCCACTTTGTCTGTACGGAGGGGAGAGGCCCGCTCTGGGAGAA
GGCGGTTGAGATGAATATTCCCGTGGTCGTTCCGGAGTGGGTGGATGCTT
GCGAGGCCGAAGGCACTATTGTCAGTGTTCGCGGGTATTACCTGAATGCT
GACCCCAAGGCAAGACAGCTGGGCCCGATTCACAGCTCTACGCAGCATCA
GCGAACGGTTTCTACTGCCACCTCGAACCTGGCGCCCCCGGCTGCGCAGG
CTCAGACCCCATCACGGCAGGCGGCGCAGGAAGACGAGCAGAACGTTGAG
CCTCCGGTTACGCCGTTCCCGGGAGCCGAGATGACCGGCCAGCCCATCGC
GGAAGAGAAGGAGGTGGGATCGGACGAGAGTACAGAGTCGCCGCCACCTC
CACCTCCGAAGGATGAAGAAAAGGAGGATGAAACTGCCGAGCAGAATGAT
GTTGGTCTCCTTGACAGTCGGCAAGGTAGACGCAGGAGTCGCTGTACTCT
TGACCCAGGACAACAGACTGAGCGCAAATCAAAGGAGGGTGGAGAAGGGG
ACTTTAATGAAGTCCCTCTGTAAATCGAATTTCCCTCCGTCCTTCTCCCC
AGCAACATCACGTCCGGTAGTATCGTCGACATCACCGTCGCGCGCAACCA
CACAGCCGAATCCGCCAGTGCCGCCAACTTCCAGTCGCTCCAAAAACGCA
TCCTCAATACCTACGGCATCAAGACCCCCACACCCCCGGTTCTCCGTCTC
CGCAACGCAACTCAAACTTCCCTCGTCTTGGAATGGGAACCTATTGACCT
AGCCACCGCATCCCTGAAATCACTCTCCCTGTACCGCAATGGCTCTAAAG
CCGGATCCATTCCCCGTCCGCTTGAGACGCGAAGCACCAAAATTAGCGGT
CTAGCCATCCACACCGAATACACCTTCCATCTCGTCCTGCGCACCACCGC
CGGCACCTACCAGTCGGAGAAGCTGACTTGCCGCACGCACAAGATGACGG
ATCTCTCCGGTATCACGGTGACGGCGGGTGTCCTTCCCCCGCAACAGAAG
GATGCTCTTGCAGCTGCGTTGGATCGCATCGGTGGAAAGCTGATCGACTC
GGTCCGCATTGATACCACCCACTTTGTCTGTACGGAGGGGAGAGGCCCGC
TCTGGGAGAAGGCGGTTGAGATGAATATTCCCGTGGTCGTTCCGGAGTGG
GTGGATGCTTGCGAGGCCGAAGGCACTATTGTCAGTGTTCGCGGGTATTA
CCTGAATGCTGACCCCAAGGCAAGACAGCTGGGCCCGATTCACAGCTCTA
CGCAGCATCAGCGAACGGTTTCTACTGCCACCTCGAACCTGGCGCCCCCG
GCTGCGCAGGCTCAGACCCCATCACGGCAGGCGGCGCAGGAAGACGAGCA
GAACGTTGAGCCTCCGGTTACGCCGTTCCCGGGAGCCGAGATGACCGGCC
AGCCCATCGCGGAAGAGAAGGAGGTGGGATCGGACGAGAGTACAGAGTCG
CCGCCACCTCCACCTCCGAAGGATGAAGAAAAGGAGGATGAAACTGCCGA
GCAGAATGATGTTGGTCTCCTTGACAGTCGGCAAGGTAGACGCAGGAGTC
GCTGTACTCTTGACCCAGGACAACAGACTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0046983protein dimerization activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_35000CAN33_35000Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_35000-T1CAN33_35000-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_35000-T1.cdsCAN33_35000-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_35000-T1.exon3CAN33_35000-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_35000-T1.exon2CAN33_35000-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_35000-T1.exon1CAN33_35000-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteBUSCO:EOG092612CC
DBxrefInterPro:IPR036116
DBxrefInterPro:IPR003961
DBxrefInterPro:IPR036420
DBxrefInterPro:IPR031673
DBxrefInterPro:IPR013783
DBxrefInterPro:IPR031669
DBxrefInterPro:IPR001357
DBxrefPFAM:PF12738
DBxrefPFAM:PF16893
DBxrefPFAM:PF16892
DBxrefPFAM:PF00533
Producttwin BRCT domain family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000007.1supercontigNKJJ01000007.1:1296575..1297956 -
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