You are here

Home

CAN33_35175-T1, CAN33_35175-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_35175-T1
Unique NameCAN33_35175-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000007.1:1419396..1420642+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_35175-T1 ID=CAN33_35175-T1|Name=CAN33_35175-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1247bp|location=Sequence derived from alignment at NKJJ01000007.1:1419396..1420642+ (Aspergillus niger FDAARGOS_311)
ATGTGCCTTCGAACTCCGCTGGCTTGCGATGCGGCTCTTATTCGATTGTC
AAACGGTGCATTGGCTAACCTTGATGCTATCTTCACTCCATTAGTATCCT
CCGGCTTCGTACCCTCCAACTTCATATCCCCCGACTTCCTATCCACCACC
AGAGCACCAATACCCGCCTGCACCTGGGCAGTATCCGCCTCCGCCGAACA
TGGCAGCTATCCCCCTCCACAGTCGCAGGACCCCTACCGCATGGCACCCC
CTCCCGGCTCCTACCGCCCCCCAGACATGTACAGCGCACCCCCTCCGCCT
CAAGTAGTCTACCAAGCTGCTGCTCCCCGTCAGCGGACTGCCATCGCGTG
TCGTTATTGCCGGAGACGGAAGGTACGTTCTCGCGTCGATTCTGTCAAAT
GGCTCCCTTTATGGGACGCTCGTCTTATACTCGGTCGCAACTGACGCTTT
TCTTTCCGGAACCAATAGATTCGTTGCTCGGGATTTGAAAGCTCTCAGGA
TGGACGCTGCAGCAACTGCATCCGCTTCAACCAGGAGTGCATGTTCACGC
CAGTCTCATCCCAGGCGCAAGCCTTTGTACCTGCCCATGCCGCCTACCCG
CACCTACGGAATGCCCAAAACCAAGGCCGCGGACCGCCTCCTGGAGGAGT
GATGCTCTATGGTGCCCATGGCCAGCCTCTCCCACCACAGCAGCAGCCGG
AGAGTACACTTCCATCCGCGTACCCTCCTCAATACGCAAACGCTCCTCCT
CTACCCAATGGAGCTCAGGATCATGTGAGTAGCACGAGCTTCTTATTGCG
ATCCAACTGGTTCTCTCTTTACTAATCTTCTTTGATCAGAGGCCTGTCGG
TCGTCGAGGATCAAGCTCCGGTTTTGAATATCCCGATCCCACAAATCTCG
CCCCGGTAACACCCGCTTCATCTGCCTCTGGCTATCAGACGTATAGTGCG
ACGAGTCCATACTACCCGCCGCCTCCTCAGCATGAGCGACGTACCTCTCC
GCAATCTAGTTACCCCTATGATGGTCGCCATTCCTCGTCTCCTCACAGCT
CCCCGTATCCCCCTGTTCACCCCAACCAAGGGGCGATGACTCCTCCCCCT
ACTTCCACCCCGGGTGTTTCATCTCGCGGTGGACTGAACGTGCGAGATAT
GTTGAACCCTGGAGAAGGTCAGAACCCGGGCCAAGGTCGTTCTAGCACCG
ATAGTGACATGCTCAATGCATTGAACCGTCGGGGCCTAGGCCAATAG
back to top

Coding sequence (CDS) from alignment at NKJJ01000007.1:1419396..1420642+

>CAN33_35175-T1 ID=CAN33_35175-T1|Name=CAN33_35175-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3258bp|location=Sequence derived from alignment at NKJJ01000007.1:1419396..1420642+ (Aspergillus niger FDAARGOS_311)
ATGTGCCTTCGAACTCCGCTGGCTTGCGATGCGGCTCTTATTCGATTGTC
AAACGGTGCATTGGCTAACCTTGATGCTATCTTCACTCCATTAGTATCCT
CCGGCTTCGTACCCTCCAACTTCATATCCCCCGACTTCCTATCCACCACC
AGAGCACCAATACCCGCCTGCACCTGGGCAGTATCCGCCTCCGCCGAACA
TGGCAGCTATCCCCCTCCACAGTCGCAGGACCCCTACCGCATGGCACCCC
CTCCCGGCTCCTACCGCCCCCCAGACATGTACAGCGCACCCCCTCCGCCT
CAAGTAGTCTACCAAGCTGCTGCTCCCCGTCAGCGGACTGCCATCGCGTG
TCGTTATTGCCGGAGACGGAAGATTCGTTGCTCGGGATTTGAAAGCTCTC
AGGATGGACGCTGCAGCAACTGCATCCGCTTCAACCAGGAGTGCATGTTC
ACGCCAGTCTCATCCCAGGCGCAAGCCTTTGTACCTGCCCATGCCGCCTA
CCCGCACCTACGGAATGCCCAAAACCAAGGCCGCGGACCGCCTCCTGGAG
GAGTGATGCTCTATGGTGCCCATGGCCAGCCTCTCCCACCACAGCAGCAG
CCGGAGAGTACACTTCCATCCGCGTACCCTCCTCAATACGCAAACGCTCC
TCCTCTACCCAATGGAGCTCAGGATCATAGGCCTGTCGGTCGTCGAGGAT
CAAGCTCCGGTTTTGAATATCCCGATCCCACAAATCTCGCCCCGGTAACA
CCCGCTTCATCTGCCTCTGGCTATCAGACGTATAGTGCGACGAGTCCATA
CTACCCGCCGCCTCCTCAGCATGAGCGACGTACCTCTCCGCAATCTAGTT
ACCCCTATGATGGTCGCCATTCCTCGTCTCCTCACAGCTCCCCGTATCCC
CCTGTTCACCCCAACCAAGGGGCGATGACTCCTCCCCCTACTTCCACCCC
GGGTGTTTCATCTCGCGGTGGACTGAACGTGCGAGATATGTTGAACCCTG
GAGAAGGTCAGAACCCGGGCCAAGGTCGTTCTAGCACCGATAGTGACATG
CTCAATGCATTGAACCGTCGGGGCCTAGGCCAATAGATGTGCCTTCGAAC
TCCGCTGGCTTGCGATGCGGCTCTTATTCGATTGTCAAACGGTGCATTGG
CTAACCTTGATGCTATCTTCACTCCATTAGTATCCTCCGGCTTCGTACCC
TCCAACTTCATATCCCCCGACTTCCTATCCACCACCAGAGCACCAATACC
CGCCTGCACCTGGGCAGTATCCGCCTCCGCCGAACATGGCAGCTATCCCC
CTCCACAGTCGCAGGACCCCTACCGCATGGCACCCCCTCCCGGCTCCTAC
CGCCCCCCAGACATGTACAGCGCACCCCCTCCGCCTCAAGTAGTCTACCA
AGCTGCTGCTCCCCGTCAGCGGACTGCCATCGCGTGTCGTTATTGCCGGA
GACGGAAGATTCGTTGCTCGGGATTTGAAAGCTCTCAGGATGGACGCTGC
AGCAACTGCATCCGCTTCAACCAGGAGTGCATGTTCACGCCAGTCTCATC
CCAGGCGCAAGCCTTTGTACCTGCCCATGCCGCCTACCCGCACCTACGGA
ATGCCCAAAACCAAGGCCGCGGACCGCCTCCTGGAGGAGTGATGCTCTAT
GGTGCCCATGGCCAGCCTCTCCCACCACAGCAGCAGCCGGAGAGTACACT
TCCATCCGCGTACCCTCCTCAATACGCAAACGCTCCTCCTCTACCCAATG
GAGCTCAGGATCATAGGCCTGTCGGTCGTCGAGGATCAAGCTCCGGTTTT
GAATATCCCGATCCCACAAATCTCGCCCCGGTAACACCCGCTTCATCTGC
CTCTGGCTATCAGACGTATAGTGCGACGAGTCCATACTACCCGCCGCCTC
CTCAGCATGAGCGACGTACCTCTCCGCAATCTAGTTACCCCTATGATGGT
CGCCATTCCTCGTCTCCTCACAGCTCCCCGTATCCCCCTGTTCACCCCAA
CCAAGGGGCGATGACTCCTCCCCCTACTTCCACCCCGGGTGTTTCATCTC
GCGGTGGACTGAACGTGCGAGATATGTTGAACCCTGGAGAAGGTCAGAAC
CCGGGCCAAGGTCGTTCTAGCACCGATAGTGACATGCTCAATGCATTGAA
CCGTCGGGGCCTAGGCCAATAGATGTGCCTTCGAACTCCGCTGGCTTGCG
ATGCGGCTCTTATTCGATTGTCAAACGGTGCATTGGCTAACCTTGATGCT
ATCTTCACTCCATTAGTATCCTCCGGCTTCGTACCCTCCAACTTCATATC
CCCCGACTTCCTATCCACCACCAGAGCACCAATACCCGCCTGCACCTGGG
CAGTATCCGCCTCCGCCGAACATGGCAGCTATCCCCCTCCACAGTCGCAG
GACCCCTACCGCATGGCACCCCCTCCCGGCTCCTACCGCCCCCCAGACAT
GTACAGCGCACCCCCTCCGCCTCAAGTAGTCTACCAAGCTGCTGCTCCCC
GTCAGCGGACTGCCATCGCGTGTCGTTATTGCCGGAGACGGAAGATTCGT
TGCTCGGGATTTGAAAGCTCTCAGGATGGACGCTGCAGCAACTGCATCCG
CTTCAACCAGGAGTGCATGTTCACGCCAGTCTCATCCCAGGCGCAAGCCT
TTGTACCTGCCCATGCCGCCTACCCGCACCTACGGAATGCCCAAAACCAA
GGCCGCGGACCGCCTCCTGGAGGAGTGATGCTCTATGGTGCCCATGGCCA
GCCTCTCCCACCACAGCAGCAGCCGGAGAGTACACTTCCATCCGCGTACC
CTCCTCAATACGCAAACGCTCCTCCTCTACCCAATGGAGCTCAGGATCAT
AGGCCTGTCGGTCGTCGAGGATCAAGCTCCGGTTTTGAATATCCCGATCC
CACAAATCTCGCCCCGGTAACACCCGCTTCATCTGCCTCTGGCTATCAGA
CGTATAGTGCGACGAGTCCATACTACCCGCCGCCTCCTCAGCATGAGCGA
CGTACCTCTCCGCAATCTAGTTACCCCTATGATGGTCGCCATTCCTCGTC
TCCTCACAGCTCCCCGTATCCCCCTGTTCACCCCAACCAAGGGGCGATGA
CTCCTCCCCCTACTTCCACCCCGGGTGTTTCATCTCGCGGTGGACTGAAC
GTGCGAGATATGTTGAACCCTGGAGAAGGTCAGAACCCGGGCCAAGGTCG
TTCTAGCACCGATAGTGACATGCTCAATGCATTGAACCGTCGGGGCCTAG
GCCAATAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0008270zinc ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_35175CAN33_35175Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_35175-T1.exon1CAN33_35175-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_35175-T1.exon2CAN33_35175-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_35175-T1.exon3CAN33_35175-T1.exon3Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_35175-T1.cdsCAN33_35175-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_35175-T1CAN33_35175-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
ProductFungal Zn(2)-Cys(6) binuclear cluster domain family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000007.1supercontigNKJJ01000007.1:1419396..1420642 +
Powered by Drupal