You are here

CAN33_35265-T1, CAN33_35265-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_35265-T1
Unique NameCAN33_35265-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000007.1:1471905..1473470+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_35265-T1 ID=CAN33_35265-T1|Name=CAN33_35265-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1566bp|location=Sequence derived from alignment at NKJJ01000007.1:1471905..1473470+ (Aspergillus niger FDAARGOS_311)
ATGCCGATGTTCCGTATGAAAACGGTTTTCCCTCTGATCGCTCTCTTCTC GATTGGATTCTTCTTCTGGTGCGTTGAGCGCTTCGACCAGGCTGCTCTCC TGCGTTTCAAGCATCCAGCCGATCGCGTCGCTGGCTCAACCCCGCAAATC CAGTTGCAACCGACACCCCCATCCAAAGCCTGCGATGTGGACCCTGGTCT CCAGGCTCCTCTGCCCTTCAGCGAATGGCTTCCTCGCAAGAACTACACCC GTGCCTACTTCCGTCCTCACCATGTGAGCCCCAAGACCGAGTTCAACTCG CTTGAGGATATCGAAGTCCCGGTCCTCCCTCCGATGACCGTCATGGAGCG TGGTATGGTCGTGTCGCCCGAGAACGAGGAACCCATGCCTTGCCCTCCGA TAATCGACGTCAACGTCGCTGCTGATAACGATGTGGATGAGACCGACAAG CTCCTGTTTGGGCTGGCCACCACTGCTGACCGTCTGGACCGTTTGCTTCC TTCTCTGCTGTACTCCTACGGAAACACCAAGGCCGGCTTGATTGTGCTTG TTCCGGAATCGGACGACGACATTCCCAAGCAGGAGGCCTACTTCCGCAAC CGTGGCTTGGATTTGACCCTGATCCAGTCTCCTTTGGACTTCACCGCTCG TTACTTCGGTCTGGTTCAGGCTTTCGCAGAGACCATCCGGACCAAGCGCC CTCAGACTCAGTGGGTCAGCTTCATTGATGATGACACTTTCTTCCTGTCC CTGCCGACCATCGCTGAGGAATTGAAGCTCTTCGATGTGAGCAAGAAGCA TTACATTGGTGCCTTGTCTGAGGCTAGCTGGCAGGTGGATACTTTCGGCC ACATCGCTTTCGGTGGTGCTGGTGTTTTCGTCTCCAAGCCCCTTCTCGAT GTTCTGGAGGAATACTACGATGAGTGCCAGTCTTGGGGTGAGCAGCCCGG TGACCAGAAGCTCGGCCAGTGCATCCAGAGATACGGAGAGACCCCTCTTA CCCTCTGGCCCTCGCTGTACCAGATGGACATGAAGGGTGAGGTTGACGGT GTCTACGAGTCTGGCCGCAAGATTGAATCCCTGCACCACTGGAACAGCTG GTACACCAAGGATGTTGTTAAGATGACCACTGTGGCTGCCGCTGCGGGTC GCCGCTCCGTTCTGCGCCGCTGGGTCTTTGACCAGGAGGAGATCGTCAAC AACGCTACTGGTCGCTCCACCCGCACTTTCTGGGTGTTCACCAACGGATA CTCGCTCGTCAAGTACACCTACGATGAGAACACCCCCGATGATGCGATCA ACTTTGACCACACTGAGAAGACCTGGGAGGAGGATCCCCGTGGTTACGAG GCCCGCCTGGGACCCCTCCGCAACCGGGATCAGGATGGAGTCACCAAGGA TCGTTGGTTGTTGCGGGATGCCTTCGTTGTTGGCGACAATGTGCACCAGT GGTATGTGCGTGAAGAAGACGAAGGCCACAGCGTGATCGAGATCGTTTGG CTCGGCCCCAAGGGTGGTGGCGGTGCCGGCGTCCGGGACTTTGGAGTCCG CAGGCAACATCACTAA
back to top

Coding sequence (CDS) from alignment at NKJJ01000007.1:1471905..1473470+

>CAN33_35265-T1 ID=CAN33_35265-T1|Name=CAN33_35265-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1566bp|location=Sequence derived from alignment at NKJJ01000007.1:1471905..1473470+ (Aspergillus niger FDAARGOS_311)
ATGCCGATGTTCCGTATGAAAACGGTTTTCCCTCTGATCGCTCTCTTCTC
GATTGGATTCTTCTTCTGGTGCGTTGAGCGCTTCGACCAGGCTGCTCTCC
TGCGTTTCAAGCATCCAGCCGATCGCGTCGCTGGCTCAACCCCGCAAATC
CAGTTGCAACCGACACCCCCATCCAAAGCCTGCGATGTGGACCCTGGTCT
CCAGGCTCCTCTGCCCTTCAGCGAATGGCTTCCTCGCAAGAACTACACCC
GTGCCTACTTCCGTCCTCACCATGTGAGCCCCAAGACCGAGTTCAACTCG
CTTGAGGATATCGAAGTCCCGGTCCTCCCTCCGATGACCGTCATGGAGCG
TGGTATGGTCGTGTCGCCCGAGAACGAGGAACCCATGCCTTGCCCTCCGA
TAATCGACGTCAACGTCGCTGCTGATAACGATGTGGATGAGACCGACAAG
CTCCTGTTTGGGCTGGCCACCACTGCTGACCGTCTGGACCGTTTGCTTCC
TTCTCTGCTGTACTCCTACGGAAACACCAAGGCCGGCTTGATTGTGCTTG
TTCCGGAATCGGACGACGACATTCCCAAGCAGGAGGCCTACTTCCGCAAC
CGTGGCTTGGATTTGACCCTGATCCAGTCTCCTTTGGACTTCACCGCTCG
TTACTTCGGTCTGGTTCAGGCTTTCGCAGAGACCATCCGGACCAAGCGCC
CTCAGACTCAGTGGGTCAGCTTCATTGATGATGACACTTTCTTCCTGTCC
CTGCCGACCATCGCTGAGGAATTGAAGCTCTTCGATGTGAGCAAGAAGCA
TTACATTGGTGCCTTGTCTGAGGCTAGCTGGCAGGTGGATACTTTCGGCC
ACATCGCTTTCGGTGGTGCTGGTGTTTTCGTCTCCAAGCCCCTTCTCGAT
GTTCTGGAGGAATACTACGATGAGTGCCAGTCTTGGGGTGAGCAGCCCGG
TGACCAGAAGCTCGGCCAGTGCATCCAGAGATACGGAGAGACCCCTCTTA
CCCTCTGGCCCTCGCTGTACCAGATGGACATGAAGGGTGAGGTTGACGGT
GTCTACGAGTCTGGCCGCAAGATTGAATCCCTGCACCACTGGAACAGCTG
GTACACCAAGGATGTTGTTAAGATGACCACTGTGGCTGCCGCTGCGGGTC
GCCGCTCCGTTCTGCGCCGCTGGGTCTTTGACCAGGAGGAGATCGTCAAC
AACGCTACTGGTCGCTCCACCCGCACTTTCTGGGTGTTCACCAACGGATA
CTCGCTCGTCAAGTACACCTACGATGAGAACACCCCCGATGATGCGATCA
ACTTTGACCACACTGAGAAGACCTGGGAGGAGGATCCCCGTGGTTACGAG
GCCCGCCTGGGACCCCTCCGCAACCGGGATCAGGATGGAGTCACCAAGGA
TCGTTGGTTGTTGCGGGATGCCTTCGTTGTTGGCGACAATGTGCACCAGT
GGTATGTGCGTGAAGAAGACGAAGGCCACAGCGTGATCGAGATCGTTTGG
CTCGGCCCCAAGGGTGGTGGCGGTGCCGGCGTCCGGGACTTTGGAGTCCG
CAGGCAACATCACTAA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_35265CAN33_35265Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_35265-T1.exon1CAN33_35265-T1.exon1Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_35265-T1.cdsCAN33_35265-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_35265-T1CAN33_35265-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR006740
DBxrefPFAM:PF04646
ProductProtein of unknown function DUF604 family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000007.1supercontigNKJJ01000007.1:1471905..1473470 +