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CAN33_35335-T1, CAN33_35335-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_35335-T1
Unique NameCAN33_35335-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000007.1:1535744..1536904-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_35335-T1 ID=CAN33_35335-T1|Name=CAN33_35335-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1161bp|location=Sequence derived from alignment at NKJJ01000007.1:1535744..1536904- (Aspergillus niger FDAARGOS_311)
ATGGGCTCCAGCTCCAAAAAGAAGAAGGAGAAGCAGAAGGACTTCCAGGT
ACCCCACCCATCCCATACCCACCACCACCACCGCCAGACCCAACATAACT
AACTTCCACCACCAGAAACCCAAGCTCAAAGTCGGCAAAGCCAAAGCCAA
ACCCGACAATTTCACTGACACGAGCTTCAAATCCAAGAGTAAACACCCCC
CAAGAATCCCCACCACCCACCACACTCCGTGGTTAACATAAGAGACAAAA
ACCAGGTATAACCCTAACCCAACAATCCCTAACCCTGCACGCCCCCAGCA
CCACCCACCAATTCACCCACCACGTCTCCCTCCTCAACTCCAAATCCGAC
ACCCAGCGCCGAGACTCCCTCGCGCATCTAACCACCCATCTCACCTCCGC
CCCCACCACCCAACCCCTCCCCATCCCCGTAAGCACCCTCCTCCCCACCC
TCTCCCCCTAATCCTCGACGCCAGCACAACCGTGCGCACCCAGCTCCTCA
AGCTCCTCCGCACCCTGCCCCCAGCCGACGTGGAAGACCACGTCGCCAGC
CTAATGCCCTACGTGCGCGCCGGCATGACCCACCTGGCCGCCGACATCCG
CGTCACCGCCGTGGATGTCCTCTCGTGGCTGGTCGAGATCGCCGGCGAGG
CCGTGGTCTCGTGCGCCGGCGGCTGGATCAAGACCCTGAATTGCTTTCTC
TCCGTGCTGGGTTGGCATACTGAGGAGAGCTCCAAGTGGTCGAGTAATCG
GGCAGCGTTTGGGAAGGCCGGCGCGAAGGGGAAGCCCATGGTGAAGGTTT
TGGGGGTGCTGGCGGAGTTTTTGGAGGCTGGGATTGGGGAGGATGGTGAT
GAGATGGAGGTGGATGAGGGTGGTGGGAGTGGGACTGGTGTTGGGTTCCC
GATTGTGCAGACGGAGGTGCATATGGTGCCTAAGTCGGCGCAGCCCTATG
TGTATTTGAATTTGTTTGGGGCGCCGAGGGATGAGGAAGGGGAGATGTAT
GAGACCAGGGAGGAGAGGTTCCGTGTGTTTAAGGGACGGTTTTTGGTTCC
TGTTGAGCGCGGGTTGGAGAGTGCGAGGCAGGATGGCGGGGAGGTTGGAC
GGGCGTCGTCGGCTGTGAGTAAGGTGTTGAAGGAGGCTAGGGGGTGGATT
GGGAGGGTTAA
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Coding sequence (CDS) from alignment at NKJJ01000007.1:1535744..1536904-

>CAN33_35335-T1 ID=CAN33_35335-T1|Name=CAN33_35335-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2610bp|location=Sequence derived from alignment at NKJJ01000007.1:1535744..1536904- (Aspergillus niger FDAARGOS_311)
GGTTAACACCACCCACCAATTCACCCACCACGTCTCCCTCCTCAACTCCA
AATCCGACACCCAGCGCCGAGACTCCCTCGCGCATCTAACCACCCATCTC
ACCTCCGCCCCCACCACCCAACCCCTCCCCATCCCCGTAAGCACCCTCCT
CCCCACCCTCTCCCCCTAATCCTCGACGCCAGCACAACCGTGCGCACCCA
GCTCCTCAAGCTCCTCCGCACCCTGCCCCCAGCCGACGTGGAAGACCACG
TCGCCAGCCTAATGCCCTACGTGCGCGCCGGCATGACCCACCTGGCCGCC
GACATCCGCGTCACCGCCGTGGATGTCCTCTCGTGGCTGGTCGAGATCGC
CGGCGAGGCCGTGGTCTCGTGCGCCGGCGGCTGGATCAAGACCCTGAATT
GCTTTCTCTCCGTGCTGGGTTGGCATACTGAGGAGAGCTCCAAGTGGTCG
AGTAATCGGGCAGCGTTTGGGAAGGCCGGCGCGAAGGGGAAGCCCATGGT
GAAGGTTTTGGGGGTGCTGGCGGAGTTTTTGGAGGCTGGGATTGGGGAGG
ATGGTGATGAGATGGAGGTGGATGAGGGTGGTGGGAGTGGGACTGGTGTT
GGGTTCCCGATTGTGCAGACGGAGGTGCATATGGTGCCTAAGTCGGCGCA
GCCCTATGTGTATTTGAATTTGTTTGGGGCGCCGAGGGATGAGGAAGGGG
AGATGTATGAGACCAGGGAGGAGAGGTTCCGTGTGTTTAAGGGACGGTTT
TTGGTTCCTGTTGAGCGCGGGTTGGAGAGTGCGAGGCAGGATGGCGGGGA
GGTTGGACGGGCGTCGTCGGCTATGGGCTCCAGCTCCAAAAAGAAGAAGG
AGAAGCAGAAGGACTTCCAGGGTTAACACCACCCACCAATTCACCCACCA
CGTCTCCCTCCTCAACTCCAAATCCGACACCCAGCGCCGAGACTCCCTCG
CGCATCTAACCACCCATCTCACCTCCGCCCCCACCACCCAACCCCTCCCC
ATCCCCGTAAGCACCCTCCTCCCCACCCTCTCCCCCTAATCCTCGACGCC
AGCACAACCGTGCGCACCCAGCTCCTCAAGCTCCTCCGCACCCTGCCCCC
AGCCGACGTGGAAGACCACGTCGCCAGCCTAATGCCCTACGTGCGCGCCG
GCATGACCCACCTGGCCGCCGACATCCGCGTCACCGCCGTGGATGTCCTC
TCGTGGCTGGTCGAGATCGCCGGCGAGGCCGTGGTCTCGTGCGCCGGCGG
CTGGATCAAGACCCTGAATTGCTTTCTCTCCGTGCTGGGTTGGCATACTG
AGGAGAGCTCCAAGTGGTCGAGTAATCGGGCAGCGTTTGGGAAGGCCGGC
GCGAAGGGGAAGCCCATGGTGAAGGTTTTGGGGGTGCTGGCGGAGTTTTT
GGAGGCTGGGATTGGGGAGGATGGTGATGAGATGGAGGTGGATGAGGGTG
GTGGGAGTGGGACTGGTGTTGGGTTCCCGATTGTGCAGACGGAGGTGCAT
ATGGTGCCTAAGTCGGCGCAGCCCTATGTGTATTTGAATTTGTTTGGGGC
GCCGAGGGATGAGGAAGGGGAGATGTATGAGACCAGGGAGGAGAGGTTCC
GTGTGTTTAAGGGACGGTTTTTGGTTCCTGTTGAGCGCGGGTTGGAGAGT
GCGAGGCAGGATGGCGGGGAGGTTGGACGGGCGTCGTCGGCTATGGGCTC
CAGCTCCAAAAAGAAGAAGGAGAAGCAGAAGGACTTCCAGGGTTAACACC
ACCCACCAATTCACCCACCACGTCTCCCTCCTCAACTCCAAATCCGACAC
CCAGCGCCGAGACTCCCTCGCGCATCTAACCACCCATCTCACCTCCGCCC
CCACCACCCAACCCCTCCCCATCCCCGTAAGCACCCTCCTCCCCACCCTC
TCCCCCTAATCCTCGACGCCAGCACAACCGTGCGCACCCAGCTCCTCAAG
CTCCTCCGCACCCTGCCCCCAGCCGACGTGGAAGACCACGTCGCCAGCCT
AATGCCCTACGTGCGCGCCGGCATGACCCACCTGGCCGCCGACATCCGCG
TCACCGCCGTGGATGTCCTCTCGTGGCTGGTCGAGATCGCCGGCGAGGCC
GTGGTCTCGTGCGCCGGCGGCTGGATCAAGACCCTGAATTGCTTTCTCTC
CGTGCTGGGTTGGCATACTGAGGAGAGCTCCAAGTGGTCGAGTAATCGGG
CAGCGTTTGGGAAGGCCGGCGCGAAGGGGAAGCCCATGGTGAAGGTTTTG
GGGGTGCTGGCGGAGTTTTTGGAGGCTGGGATTGGGGAGGATGGTGATGA
GATGGAGGTGGATGAGGGTGGTGGGAGTGGGACTGGTGTTGGGTTCCCGA
TTGTGCAGACGGAGGTGCATATGGTGCCTAAGTCGGCGCAGCCCTATGTG
TATTTGAATTTGTTTGGGGCGCCGAGGGATGAGGAAGGGGAGATGTATGA
GACCAGGGAGGAGAGGTTCCGTGTGTTTAAGGGACGGTTTTTGGTTCCTG
TTGAGCGCGGGTTGGAGAGTGCGAGGCAGGATGGCGGGGAGGTTGGACGG
GCGTCGTCGGCTATGGGCTCCAGCTCCAAAAAGAAGAAGGAGAAGCAGAA
GGACTTCCAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
IPI1CAN33_35335Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_35335-T1CAN33_35335-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_35335-T1.cdsCAN33_35335-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_35335-T1.exon3CAN33_35335-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_35335-T1.exon2CAN33_35335-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_35335-T1.exon1CAN33_35335-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR024679
DBxrefPFAM:PF12333
ProductrRNA processing protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000007.1supercontigNKJJ01000007.1:1535744..1536904 -
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