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CAN33_35340-T1, CAN33_35340-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_35340-T1
Unique NameCAN33_35340-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000007.1:1538074..1540809-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_35340-T1 ID=CAN33_35340-T1|Name=CAN33_35340-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2736bp|location=Sequence derived from alignment at NKJJ01000007.1:1538074..1540809- (Aspergillus niger FDAARGOS_311)
ATGTCCGGGTTGACCCTGGGGGGAGGAGGCAGTGGTGGTGTGCGACCGAC
GCAACCCGCGGCCTTTGCTTCTCTCCAGGATTCCGCCGACGCCGACCGCC
GCTCCTCCACCACCACCTCCAACAACCCCCTCCACTTCCCTCCGACTTCC
TCTCAACTCTCCGACGATTTCTCCTTTGGCTCCCCAATCAGCCCCGCCGA
TTCCTCGAATGCTCCCGACAGTCTGCTTCACGATTCCCTTTTTCCGGAAT
GGAAGGTCGGTACGCCTCGAGCCGGGTTTGATGGGCCCGATGAGATGCAG
CGAAAGGACCCTTTAGCGACCCAGATATGGAAGCTGTATTCTAGGACCAA
GGCTCAGTTACCCAACCAAGAGCGCATGGAGAACCTGACGTGGCGGATGA
TGGCAATGAGCTTGAAACGCAAGGAACGGGAACGTGCTCAGCAATCTCGG
TAGGTGGAGTGCCTCGTCAACCCTCTCTGTTCCTCTCCCTCACCCCCTGC
CGTCGCTCGATGGAATGCTGATCGAACCTCGTGCGTCAATAGTAGTGCCT
CCGCTAGAAACAGCGTTTCCGGCCCCAGTGGCATTGCTCAACTACGTCTC
ACTGATCGCGAGCCGACCGCGGCAAATCCGTCTCTCTCCACCGACCTGAC
CTCTGATCCTATGAACCTCGACGATTTCATTGTTCCCTTCGAATCTCCGT
CCGATCACCCATCTCCTCAACTCACGAAAGGCGAGGCGACGTCGGCAGCC
ATCCCGATCAAGTCCCGCAAGGACCAGGTGGCTGAGTCCACACCCGTGCC
CGCATCGTTCCCCCACCCACCCCAGGACCAGCGAAAGAACAGTGAGTTTG
GCTACGTGCCCCGTCGGGTGCGCAAGACGAGCATCGACGACCGCCAGTTC
TTCAACCTCCAGGTGCCCACCCGGAAACGCCCGGCCGAGGCGTCGCCCCA
GGTGCCGCCCGTGTCGAACGCCATGTTGGCTCAGGATCCGGACTTGTCGG
GCGGTGTGCCGGACTACGCCCTGGATGCGTCGTCGGCCTTTGCGTTGCAT
CATAATAACCATTCTTCGTCCCACCACAACCACACTTCGCCGGGCATGCC
GTTTGGTCTGGATACCTACGGCCTGGGTGAAGATCCGATCCTTACTTCCG
CCGGTCCCTACCAGACCCAGTTTACTTTCTCTCCCACTGAGTCCCCCATG
ACGTCAGGCAACCCCTTTGCCAACCTGTATGCGCACACGCCGGTGGCCTC
GTCCCTCAACTCGACCGATTTCTTCTCCCCGCCGCAGTCGGGATACCAGT
CGACAGCCTCGACGCCGCAGCCCGCGTATGACGGTGAGCATTCGATGTTC
TTCGATATGCCGTCGGTGGATGCGCGCACGCAGCGCCGGGTTCCCAACTA
CGTCTCGCACCGCACGTCGAACCTGTCTGCTTCGCTGCAACCGCGATATA
TGTTCAACCAGAACCAAGATCAGTCGCACCACACCGGCAACCATTCGTCG
TCGATGCACTCGCCGGGCTATCCCATCCCTCAGCCCCAGCACGTTGATCC
CACCCAGGTGCTCAACCCCAACGATTTCTCGACCGGGGCTTCTCATGCGG
CCATGTTCAGCTTTGGCGCTGATTCGGATAACGAGGACGACGACGGTAAC
CAGTTCTCCGACCGTGCGGGATTGACGATGCCTGGCGATCTGGATGATGG
TGCGGATATGAACGGTGGCATGCAGTGGGATGCTCAGTTCCCTGGGTCCT
TCCACTCGCTGCCAGGATTCACCGCACAGCACCGTAAGCATGTGACGATC
GGGTCCGCCGACATGATGGACACCCCCAGCGAATGGGCTCAAAGCGGCAG
TCTGGGACGCACGCATGGATCGGCCGCCTCGGTCAGCGAGGTGCGCAACC
GCGAGCAAGATCCCCGGCGGCAGAAGATTGCGCGTACGACGTCGACGCCT
AATACGGCACAGCTGCTGCGGCAGAGCATGAACGCCAACACTTCACACAC
GTCACCCAACACACCGCCAGAGTCGGGCTTGAGCAGTGCCGTGCCATCTC
GGCCGGCCAGTCCGGGTGGCTCGAAGAACGGTGAGCAGAGCAGTGGCCCG
ACCACATGTACCAACTGCTTCACGCAGACCACCCCGTTGTGGCGGCGTAA
TCCTGAGGGCCAGCCGCTGTGTAACGCCTGCGGGCTGTTCCTGAAGCTGC
ACGGGGTGGTGCGGCCACTGTCGCTCAAGACGGACGTGATCAAGAAGCGC
AACCGCAGCAGCGCCAACAGCCTGGCGGTGGGCACTTCGCGCGCGTCGAA
GAAGTCGGCACGCAAGAACTCGGTGCAGCAGACGACGGTCACCACGCCGA
CGTCGAGCCGGGCGCAGAGTGGTGCGACGTCGTCGGAGTCGCCGCCCGCG
GTGCCGGGTGGCAGTTCGTCGGGCAGAGCCGCAGGCGTGGTCCCCATCGC
GGCGGCGCCTCCAAAGGCGAACCCGACGACGAGTTCTCCAGGACAGAGTC
GGGGAACCTCGTCCGTGCAGATGGCGCCGAAGCGTCAGCGTCGGCTGGAA
AAGGCCACGGACGCGGAGGCAGGCGGCGACGAAGCCAGCAAATCGAGCAC
GGCGAGCGGAGGACGGTCCAAGGTGGTGCCTCTGGCGCCGGCAATGCCCC
CGGCGGCAGCCAATCCGGCCAACCACAGCATTGCAGGCGGGCAAGGAGCC
AGCCAAGAGTGGGAATGGCTGACTATGAGTCTGTAA
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Coding sequence (CDS) from alignment at NKJJ01000007.1:1538074..1540809-

>CAN33_35340-T1 ID=CAN33_35340-T1|Name=CAN33_35340-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=5286bp|location=Sequence derived from alignment at NKJJ01000007.1:1538074..1540809- (Aspergillus niger FDAARGOS_311)
TAGTGCCTCCGCTAGAAACAGCGTTTCCGGCCCCAGTGGCATTGCTCAAC
TACGTCTCACTGATCGCGAGCCGACCGCGGCAAATCCGTCTCTCTCCACC
GACCTGACCTCTGATCCTATGAACCTCGACGATTTCATTGTTCCCTTCGA
ATCTCCGTCCGATCACCCATCTCCTCAACTCACGAAAGGCGAGGCGACGT
CGGCAGCCATCCCGATCAAGTCCCGCAAGGACCAGGTGGCTGAGTCCACA
CCCGTGCCCGCATCGTTCCCCCACCCACCCCAGGACCAGCGAAAGAACAG
TGAGTTTGGCTACGTGCCCCGTCGGGTGCGCAAGACGAGCATCGACGACC
GCCAGTTCTTCAACCTCCAGGTGCCCACCCGGAAACGCCCGGCCGAGGCG
TCGCCCCAGGTGCCGCCCGTGTCGAACGCCATGTTGGCTCAGGATCCGGA
CTTGTCGGGCGGTGTGCCGGACTACGCCCTGGATGCGTCGTCGGCCTTTG
CGTTGCATCATAATAACCATTCTTCGTCCCACCACAACCACACTTCGCCG
GGCATGCCGTTTGGTCTGGATACCTACGGCCTGGGTGAAGATCCGATCCT
TACTTCCGCCGGTCCCTACCAGACCCAGTTTACTTTCTCTCCCACTGAGT
CCCCCATGACGTCAGGCAACCCCTTTGCCAACCTGTATGCGCACACGCCG
GTGGCCTCGTCCCTCAACTCGACCGATTTCTTCTCCCCGCCGCAGTCGGG
ATACCAGTCGACAGCCTCGACGCCGCAGCCCGCGTATGACGGTGAGCATT
CGATGTTCTTCGATATGCCGTCGGTGGATGCGCGCACGCAGCGCCGGGTT
CCCAACTACGTCTCGCACCGCACGTCGAACCTGTCTGCTTCGCTGCAACC
GCGATATATGTTCAACCAGAACCAAGATCAGTCGCACCACACCGGCAACC
ATTCGTCGTCGATGCACTCGCCGGGCTATCCCATCCCTCAGCCCCAGCAC
GTTGATCCCACCCAGGTGCTCAACCCCAACGATTTCTCGACCGGGGCTTC
TCATGCGGCCATGTTCAGCTTTGGCGCTGATTCGGATAACGAGGACGACG
ACGGTAACCAGTTCTCCGACCGTGCGGGATTGACGATGCCTGGCGATCTG
GATGATGGTGCGGATATGAACGGTGGCATGCAGTGGGATGCTCAGTTCCC
TGGGTCCTTCCACTCGCTGCCAGGATTCACCGCACAGCACCGTAAGCATG
TGACGATCGGGTCCGCCGACATGATGGACACCCCCAGCGAATGGGCTCAA
AGCGGCAGTCTGGGACGCACGCATGGATCGGCCGCCTCGGTCAGCGAGGT
GCGCAACCGCGAGCAAGATCCCCGGCGGCAGAAGATTGCGCGTACGACGT
CGACGCCTAATACGGCACAGCTGCTGCGGCAGAGCATGAACGCCAACACT
TCACACACGTCACCCAACACACCGCCAGAGTCGGGCTTGAGCAGTGCCGT
GCCATCTCGGCCGGCCAGTCCGGGTGGCTCGAAGAACGGTGAGCAGAGCA
GTGGCCCGACCACATGTACCAACTGCTTCACGCAGACCACCCCGTTGTGG
CGGCGTAATCCTGAGGGCCAGCCGCTGTGTAACGCCTGCGGGCTGTTCCT
GAAGCTGCACGGGGTGGTGCGGCCACTGTCGCTCAAGACGGACGTGATCA
AGAAGCGCAACCGCAGCAGCGCCAACAGCCTGGCGGTGGGCACTTCGCGC
GCGTCGAAGAAGTCGGCACGCAAGAACTCGGTGCAGCAGACGACGGTCAC
CACGCCGACGTCGAGCCGGGCGCAGAGTGGTGCGACGTCGTCGGAGTCGC
CGCCCGCGGTGCCGGGTGGCAGTTCGTCGGGCAGAGCCGCAGGCGTGGTC
CCCATCGCGGCGGCGCCTCCAAAGGCGAACCCGACGACGAGTTCTCCAGG
ACAGAGTCGGGGAACCTCGTCCGTGCAGATGGCGCCGAAGCGTCAGCGTC
GGCTGGAAAAGGCCACGGACGCGGAGGCAGGCGGCGACGAAGCCAGCAAA
TCGAGCACGGCGAGCGGAGGACGGTCCAAGGTGGTGCCTCTGGCGCCGGC
AATGCCCCCGGCGGCAGCCAATCCGGCCAACCACAGCATTGCAGGCGGGC
AAGGAGCCAGCCAAGAGTGGGAATGGCTGACTATGAGTCTGTAAATGTCC
GGGTTGACCCTGGGGGGAGGAGGCAGTGGTGGTGTGCGACCGACGCAACC
CGCGGCCTTTGCTTCTCTCCAGGATTCCGCCGACGCCGACCGCCGCTCCT
CCACCACCACCTCCAACAACCCCCTCCACTTCCCTCCGACTTCCTCTCAA
CTCTCCGACGATTTCTCCTTTGGCTCCCCAATCAGCCCCGCCGATTCCTC
GAATGCTCCCGACAGTCTGCTTCACGATTCCCTTTTTCCGGAATGGAAGG
TCGGTACGCCTCGAGCCGGGTTTGATGGGCCCGATGAGATGCAGCGAAAG
GACCCTTTAGCGACCCAGATATGGAAGCTGTATTCTAGGACCAAGGCTCA
GTTACCCAACCAAGAGCGCATGGAGAACCTGACGTGGCGGATGATGGCAA
TGAGCTTGAAACGCAAGGAACGGGAACGTGCTCAGCAATCTCGTAGTGCC
TCCGCTAGAAACAGCGTTTCCGGCCCCAGTGGCATTGCTCAACTACGTCT
CACTGATCGCGAGCCGACCGCGGCAAATCCGTCTCTCTCCACCGACCTGA
CCTCTGATCCTATGAACCTCGACGATTTCATTGTTCCCTTCGAATCTCCG
TCCGATCACCCATCTCCTCAACTCACGAAAGGCGAGGCGACGTCGGCAGC
CATCCCGATCAAGTCCCGCAAGGACCAGGTGGCTGAGTCCACACCCGTGC
CCGCATCGTTCCCCCACCCACCCCAGGACCAGCGAAAGAACAGTGAGTTT
GGCTACGTGCCCCGTCGGGTGCGCAAGACGAGCATCGACGACCGCCAGTT
CTTCAACCTCCAGGTGCCCACCCGGAAACGCCCGGCCGAGGCGTCGCCCC
AGGTGCCGCCCGTGTCGAACGCCATGTTGGCTCAGGATCCGGACTTGTCG
GGCGGTGTGCCGGACTACGCCCTGGATGCGTCGTCGGCCTTTGCGTTGCA
TCATAATAACCATTCTTCGTCCCACCACAACCACACTTCGCCGGGCATGC
CGTTTGGTCTGGATACCTACGGCCTGGGTGAAGATCCGATCCTTACTTCC
GCCGGTCCCTACCAGACCCAGTTTACTTTCTCTCCCACTGAGTCCCCCAT
GACGTCAGGCAACCCCTTTGCCAACCTGTATGCGCACACGCCGGTGGCCT
CGTCCCTCAACTCGACCGATTTCTTCTCCCCGCCGCAGTCGGGATACCAG
TCGACAGCCTCGACGCCGCAGCCCGCGTATGACGGTGAGCATTCGATGTT
CTTCGATATGCCGTCGGTGGATGCGCGCACGCAGCGCCGGGTTCCCAACT
ACGTCTCGCACCGCACGTCGAACCTGTCTGCTTCGCTGCAACCGCGATAT
ATGTTCAACCAGAACCAAGATCAGTCGCACCACACCGGCAACCATTCGTC
GTCGATGCACTCGCCGGGCTATCCCATCCCTCAGCCCCAGCACGTTGATC
CCACCCAGGTGCTCAACCCCAACGATTTCTCGACCGGGGCTTCTCATGCG
GCCATGTTCAGCTTTGGCGCTGATTCGGATAACGAGGACGACGACGGTAA
CCAGTTCTCCGACCGTGCGGGATTGACGATGCCTGGCGATCTGGATGATG
GTGCGGATATGAACGGTGGCATGCAGTGGGATGCTCAGTTCCCTGGGTCC
TTCCACTCGCTGCCAGGATTCACCGCACAGCACCGTAAGCATGTGACGAT
CGGGTCCGCCGACATGATGGACACCCCCAGCGAATGGGCTCAAAGCGGCA
GTCTGGGACGCACGCATGGATCGGCCGCCTCGGTCAGCGAGGTGCGCAAC
CGCGAGCAAGATCCCCGGCGGCAGAAGATTGCGCGTACGACGTCGACGCC
TAATACGGCACAGCTGCTGCGGCAGAGCATGAACGCCAACACTTCACACA
CGTCACCCAACACACCGCCAGAGTCGGGCTTGAGCAGTGCCGTGCCATCT
CGGCCGGCCAGTCCGGGTGGCTCGAAGAACGGTGAGCAGAGCAGTGGCCC
GACCACATGTACCAACTGCTTCACGCAGACCACCCCGTTGTGGCGGCGTA
ATCCTGAGGGCCAGCCGCTGTGTAACGCCTGCGGGCTGTTCCTGAAGCTG
CACGGGGTGGTGCGGCCACTGTCGCTCAAGACGGACGTGATCAAGAAGCG
CAACCGCAGCAGCGCCAACAGCCTGGCGGTGGGCACTTCGCGCGCGTCGA
AGAAGTCGGCACGCAAGAACTCGGTGCAGCAGACGACGGTCACCACGCCG
ACGTCGAGCCGGGCGCAGAGTGGTGCGACGTCGTCGGAGTCGCCGCCCGC
GGTGCCGGGTGGCAGTTCGTCGGGCAGAGCCGCAGGCGTGGTCCCCATCG
CGGCGGCGCCTCCAAAGGCGAACCCGACGACGAGTTCTCCAGGACAGAGT
CGGGGAACCTCGTCCGTGCAGATGGCGCCGAAGCGTCAGCGTCGGCTGGA
AAAGGCCACGGACGCGGAGGCAGGCGGCGACGAAGCCAGCAAATCGAGCA
CGGCGAGCGGAGGACGGTCCAAGGTGGTGCCTCTGGCGCCGGCAATGCCC
CCGGCGGCAGCCAATCCGGCCAACCACAGCATTGCAGGCGGGCAAGGAGC
CAGCCAAGAGTGGGAATGGCTGACTATGAGTCTGTAAATGTCCGGGTTGA
CCCTGGGGGGAGGAGGCAGTGGTGGTGTGCGACCGACGCAACCCGCGGCC
TTTGCTTCTCTCCAGGATTCCGCCGACGCCGACCGCCGCTCCTCCACCAC
CACCTCCAACAACCCCCTCCACTTCCCTCCGACTTCCTCTCAACTCTCCG
ACGATTTCTCCTTTGGCTCCCCAATCAGCCCCGCCGATTCCTCGAATGCT
CCCGACAGTCTGCTTCACGATTCCCTTTTTCCGGAATGGAAGGTCGGTAC
GCCTCGAGCCGGGTTTGATGGGCCCGATGAGATGCAGCGAAAGGACCCTT
TAGCGACCCAGATATGGAAGCTGTATTCTAGGACCAAGGCTCAGTTACCC
AACCAAGAGCGCATGGAGAACCTGACGTGGCGGATGATGGCAATGAGCTT
GAAACGCAAGGAACGGGAACGTGCTCAGCAATCTCG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0043565sequence-specific DNA binding
GO:0008270zinc ion binding
Vocabulary: Biological Process
TermDefinition
GO:0042128nitrate assimilation
GO:0006355regulation of transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_35340CAN33_35340Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_35340-T1CAN33_35340-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_35340-T1.cdsCAN33_35340-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_35340-T1.exon2CAN33_35340-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_35340-T1.exon1CAN33_35340-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR013860
DBxrefInterPro:IPR013088
DBxrefInterPro:IPR011420
DBxrefInterPro:IPR000679
DBxrefPFAM:PF00320
DBxrefPFAM:PF08550
DBxrefPFAM:PF07573
ProductNitrogen regulatory protein AreA N terminus family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000007.1supercontigNKJJ01000007.1:1538074..1540809 -
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