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CAN33_35535-T1, CAN33_35535-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_35535-T1
Unique NameCAN33_35535-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000007.1:1687906..1689022+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_35535-T1 ID=CAN33_35535-T1|Name=CAN33_35535-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1117bp|location=Sequence derived from alignment at NKJJ01000007.1:1687906..1689022+ (Aspergillus niger FDAARGOS_311)
ATGCCCACTCTCAGCCAGGTCCGTCAGTCCAACACGGCCCTGGGCGCTCA
GCGCCAAAAGATGGTCGCCGTCTTCGTGGGAGGCACCAGCGGCATAGGAG
AAGCGACAGCCAAGCAGATGGCGCTCGCTGTAAAACAACCAACCATCCAC
CTGGTTGGCCGGAATCCTGCATCCGGTTCCAGAGTCCTAGAGGAGCTCCG
GGCTTCCAATCCAAACGGATCATATAACTTCATTCAATCGGATGTCTCAC
TTCTGCGCAGCGTCGACAAAGCCTGTGAGGAAATTACGGACAAGGAAAAG
CAAATTGATCTCCTCTTCATGTCCACCGGTCACCTATCTCTCTCCAAGAA
CGGTACGTAGCTGAAACAGCCTCATCCTGGTCAGTCGGAACGGCTTCAAA
CGCCACTGCGCCAACCCCAACACCCCTATACCTTACTAGTGCTGACAGGG
GGATCCGCACACAGAAACCGACGAGGGACTAGACGACAACCATGCCCTTC
GTTACTACTCCCGCATGCGCTTCGTGCAGAATCTCATGCCCTTGCTCAGT
GCCTCCCCTGGTCCAGCCAGGGTCGTATCCATCCTAGCAGGCGGCCAAGA
AGGCACCATGGAAGAAGACAATTTCGACCTGACGAAATCTTGGAGTTTTA
CGAAAGCAAACACATACGCCGCCACCTTAAACTCGCTAGCGATAGAGCAT
CTAGCCACCGCCCATCCGACCGTAAGCTTTCTACACGTCTTCCCGGGTAT
TGTACGGACTCCATTGATGAACGCCTCCTTCGGAAATTACGGCGGCGCCA
TCCTGAGCTTTCTTTCTCGTCCGATTTCAATGTCCCCAGAGGAGAGTGGC
GAGCGTAATTTGTTTCTCTCGACGTCGGCAGCCTATCCACCAGCCACGCC
GAAAGATCCATCCCAGCTGGGGGTTCCCTTGGTCAAAGGGGTGGACACGG
CGTCTGCATCAACTGGCAAAGTCGGCGGAGGTTCATATATTCTTAAATAC
GATGGGAGTAATGCAACCCGGGAGAAATTGATGGCTGATTATCGAGCCAG
GAGTTTCCCTAGCAAAGTTTGGGACCATACACTGGAGACATTCAAGCGGG
TGCTGCGGTCAGACTGA
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Coding sequence (CDS) from alignment at NKJJ01000007.1:1687906..1689022+

>CAN33_35535-T1 ID=CAN33_35535-T1|Name=CAN33_35535-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2010bp|location=Sequence derived from alignment at NKJJ01000007.1:1687906..1689022+ (Aspergillus niger FDAARGOS_311)
ATGCCCACTCTCAGCCAGGTCCGTCAGTCCAACACGGCCCTGGGCGCTCA
GCGCCAAAAGATGGTCGCCGTCTTCGTGGGAGGCACCAGCGGCATAGGAG
AAGCGACAGCCAAGCAGATGGCGCTCGCTGTAAAACAACCAACCATCCAC
CTGGTTGGCCGGAATCCTGCATCCGGTTCCAGAGTCCTAGAGGAGCTCCG
GGCTTCCAATCCAAACGGATCATATAACTTCATTCAATCGGATGTCTCAC
TTCTGCGCAGCGTCGACAAAGCCTGTGAGGAAATTACGGACAAGGAAAAG
CAAATTGATCTCCTCTTCATGTCCACCGGTCACCTATCTCTCTCCAAGAA
CGAAACCGACGAGGGACTAGACGACAACCATGCCCTTCGTTACTACTCCC
GCATGCGCTTCGTGCAGAATCTCATGCCCTTGCTCAGTGCCTCCCCTGGT
CCAGCCAGGGTCGTATCCATCCTAGCAGGCGGCCAAGAAGGCACCATGGA
AGAAGACAATTTCGACCTGACGAAATCTTGGAGTTTTACGAAAGCAAACA
CATACGCCGCCACCTTAAACTCGCTAGCGATAGAGCATCTAGCCACCGCC
CATCCGACCGTAAGCTTTCTACACGTCTTCCCGGGTATTGTACGGACTCC
ATTGATGAACGCCTCCTTCGGAAATTACGGCGGCGCCATCCTGAGCTTTC
TTTCTCGTCCGATTTCAATGTCCCCAGAGGAGAGTGGCGAGCGTAATTTG
TTTCTCTCGACGTCGGCAGCCTATCCACCAGCCACGCCGAAAGATCCATC
CCAGCTGGGGGTTCCCTTGGTCAAAGGGGTGGACACGGCGTCTGCATCAA
CTGGCAAAGTCGGCGGAGGTTCATATATTCTTAAATACGATGGGAGTAAT
GCAACCCGGGAGAAATTGATGGCTGATTATCGAGCCAGGAGTTTCCCTAG
CAAAGTTTGGGACCATACACTGGAGACATTCAAGCGGGTGCTGCGGTCAG
ACTGAATGCCCACTCTCAGCCAGGTCCGTCAGTCCAACACGGCCCTGGGC
GCTCAGCGCCAAAAGATGGTCGCCGTCTTCGTGGGAGGCACCAGCGGCAT
AGGAGAAGCGACAGCCAAGCAGATGGCGCTCGCTGTAAAACAACCAACCA
TCCACCTGGTTGGCCGGAATCCTGCATCCGGTTCCAGAGTCCTAGAGGAG
CTCCGGGCTTCCAATCCAAACGGATCATATAACTTCATTCAATCGGATGT
CTCACTTCTGCGCAGCGTCGACAAAGCCTGTGAGGAAATTACGGACAAGG
AAAAGCAAATTGATCTCCTCTTCATGTCCACCGGTCACCTATCTCTCTCC
AAGAACGAAACCGACGAGGGACTAGACGACAACCATGCCCTTCGTTACTA
CTCCCGCATGCGCTTCGTGCAGAATCTCATGCCCTTGCTCAGTGCCTCCC
CTGGTCCAGCCAGGGTCGTATCCATCCTAGCAGGCGGCCAAGAAGGCACC
ATGGAAGAAGACAATTTCGACCTGACGAAATCTTGGAGTTTTACGAAAGC
AAACACATACGCCGCCACCTTAAACTCGCTAGCGATAGAGCATCTAGCCA
CCGCCCATCCGACCGTAAGCTTTCTACACGTCTTCCCGGGTATTGTACGG
ACTCCATTGATGAACGCCTCCTTCGGAAATTACGGCGGCGCCATCCTGAG
CTTTCTTTCTCGTCCGATTTCAATGTCCCCAGAGGAGAGTGGCGAGCGTA
ATTTGTTTCTCTCGACGTCGGCAGCCTATCCACCAGCCACGCCGAAAGAT
CCATCCCAGCTGGGGGTTCCCTTGGTCAAAGGGGTGGACACGGCGTCTGC
ATCAACTGGCAAAGTCGGCGGAGGTTCATATATTCTTAAATACGATGGGA
GTAATGCAACCCGGGAGAAATTGATGGCTGATTATCGAGCCAGGAGTTTC
CCTAGCAAAGTTTGGGACCATACACTGGAGACATTCAAGCGGGTGCTGCG
GTCAGACTGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_35535CAN33_35535Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_35535-T1.exon1CAN33_35535-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_35535-T1.exon2CAN33_35535-T1.exon2Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_35535-T1.cdsCAN33_35535-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_35535-T1CAN33_35535-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR002347
DBxrefPFAM:PF13561
DBxrefPFAM:PF00106
Productshort chain dehydrogenase family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000007.1supercontigNKJJ01000007.1:1687906..1689022 +
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