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CAN33_3560-T1, CAN33_3560-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_3560-T1
Unique NameCAN33_3560-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000004.1:2280294..2281688-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_3560-T1 ID=CAN33_3560-T1|Name=CAN33_3560-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1395bp|location=Sequence derived from alignment at NKJJ01000004.1:2280294..2281688- (Aspergillus niger FDAARGOS_311)
ATGAACGACACCACGACCACCCCTTCTCCCACTCCGGGTCCCGCCACGAA
AGCATCTCCGACTTCGAAATCTCCCTCAGCCGTAGCCGGAACGAAGCGCA
AGCGCGCATCAGCGGCGAAATACTACGCCGTGAAGGCTGGCTATCAGCCC
GGTGTTTACTATGATTGGCATGATTGTCTGACCCAGGTCACCGGGTACAA
GGGAGCTGTCTGTAAGGTGACCCGCGGATAGGCCGCATCCTGTCTTCTGA
AGCTGACCTATTCTTTCAGTCCAGGCCTTCCCTTCTTACGAAGAAGCAAA
TGCCTTCCTTACCGGGACTCGTGTCCCCGCTGCGCGCGGCGGGACCCCCT
TGGATTCCGAACCCACGAGATTCTACGGTGTCCAGCGTGGTCGAATACCT
GGTGTTTATACGGACTGGGCAAAGGCGCAGGAGCAGATCAAAGGATTTCC
CAAACCGCGTTACAAGAAATTTTCGACAAGGGAGGAAGCAGAGGAGTTTG
CAAGGGAAGGTCAAGGGTCTGGCACTACGTTCGGAAAGACCCCGGAATCG
CAGAAGCTCGCCGGTGCACCGGGACTGATGAACGGGGTCCCTGCGGATGC
GCAGGGTATACCTTTTGAGGCGGGGAATGGCCCTCTGCCGACCGGAGCGG
AGGATGGGTTTGACCCCAACGTATTGTTGGATCCCAAAACAGGGAAAGTG
GTCTATAAATCACAGGACCAGAAGACCGCGACCAAGATGAAATCCACTGG
TCCACCGGGGATGCTGCGCATCTACACGGACGGTAGTTCTTTGAAAAATG
GCAAAGCGCTTGCCTCAGCGGGTGTCGGGGTTTACTTTGGACCTGGCGAC
TCACGGTTTGTCCCACCCCCCCCTGACACTCACCTTAGCGTTGTCGTGTG
TTCTTTATTCCCTGGGAGGGTTTGCCTTTGGCCTATACTGACGCCTGTTC
TCCCAGCAGAAATGTTTCAGAGCCCCTCAAAGGTAGTCGCCAGACCAATC
AGCGTGCCGAGCTGACGGCCATCCTCCGGGCGCTTGACATAGCTCCACGA
CACCGGGACGTGACCATATTTACAGATAGCCAATACGCGATCAACTGTGT
GACGGTGTGGTTTACAAAGTGGCGGCGCAACAACTGGATGACCGCTGGCA
ACAAGCCGGTGGACAACAAGGACTTGGTTGAATCCATTTTGTCGAAGATC
GAAGAACGCAATGAGCTGAAGGTGAAGACCTTGTTCGAATGGGTCAAGGG
ACATAGCTCCCACCCTGGGAATGAGGCCGCCGATCGTCTGGCGGTGAGTG
GTGCTCGACGAGGAGTTTCGGAGAAGGCTGCAGCATTGGAAGCAGTCAGA
GACATTCCGGACGAGGCTTTTGAGGATGATGACGACGACTTCTGA
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Coding sequence (CDS) from alignment at NKJJ01000004.1:2280294..2281688-

>CAN33_3560-T1 ID=CAN33_3560-T1|Name=CAN33_3560-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3699bp|location=Sequence derived from alignment at NKJJ01000004.1:2280294..2281688- (Aspergillus niger FDAARGOS_311)
AAATGTTTCAGAGCCCCTCAAAGGTAGTCGCCAGACCAATCAGCGTGCCG
AGCTGACGGCCATCCTCCGGGCGCTTGACATAGCTCCACGACACCGGGAC
GTGACCATATTTACAGATAGCCAATACGCGATCAACTGTGTGACGGTGTG
GTTTACAAAGTGGCGGCGCAACAACTGGATGACCGCTGGCAACAAGCCGG
TGGACAACAAGGACTTGGTTGAATCCATTTTGTCGAAGATCGAAGAACGC
AATGAGCTGAAGGTGAAGACCTTGTTCGAATGGGTCAAGGGACATAGCTC
CCACCCTGGGAATGAGGCCGCCGATCGTCTGGCGGTGAGTGGTGCTCGAC
GAGGAGTTTCGGAGAAGGCTGCAGCATTGGAAGCAGTCAGAGACATTCCG
GACGAGGCTTTTGAGGATGATGACGACGACTTCTGATCCAGGCCTTCCCT
TCTTACGAAGAAGCAAATGCCTTCCTTACCGGGACTCGTGTCCCCGCTGC
GCGCGGCGGGACCCCCTTGGATTCCGAACCCACGAGATTCTACGGTGTCC
AGCGTGGTCGAATACCTGGTGTTTATACGGACTGGGCAAAGGCGCAGGAG
CAGATCAAAGGATTTCCCAAACCGCGTTACAAGAAATTTTCGACAAGGGA
GGAAGCAGAGGAGTTTGCAAGGGAAGGTCAAGGGTCTGGCACTACGTTCG
GAAAGACCCCGGAATCGCAGAAGCTCGCCGGTGCACCGGGACTGATGAAC
GGGGTCCCTGCGGATGCGCAGGGTATACCTTTTGAGGCGGGGAATGGCCC
TCTGCCGACCGGAGCGGAGGATGGGTTTGACCCCAACGTATTGTTGGATC
CCAAAACAGGGAAAGTGGTCTATAAATCACAGGACCAGAAGACCGCGACC
AAGATGAAATCCACTGGTCCACCGGGGATGCTGCGCATCTACACGGACGG
TAGTTCTTTGAAAAATGGCAAAGCGCTTGCCTCAGCGGGTGTCGGGGTTT
ACTTTGGACCTGGCGACTCACGATGAACGACACCACGACCACCCCTTCTC
CCACTCCGGGTCCCGCCACGAAAGCATCTCCGACTTCGAAATCTCCCTCA
GCCGTAGCCGGAACGAAGCGCAAGCGCGCATCAGCGGCGAAATACTACGC
CGTGAAGGCTGGCTATCAGCCCGGTGTTTACTATGATTGGCATGATTGTC
TGACCCAGGTCACCGGGTACAAGGGAGCTGTCTAAATGTTTCAGAGCCCC
TCAAAGGTAGTCGCCAGACCAATCAGCGTGCCGAGCTGACGGCCATCCTC
CGGGCGCTTGACATAGCTCCACGACACCGGGACGTGACCATATTTACAGA
TAGCCAATACGCGATCAACTGTGTGACGGTGTGGTTTACAAAGTGGCGGC
GCAACAACTGGATGACCGCTGGCAACAAGCCGGTGGACAACAAGGACTTG
GTTGAATCCATTTTGTCGAAGATCGAAGAACGCAATGAGCTGAAGGTGAA
GACCTTGTTCGAATGGGTCAAGGGACATAGCTCCCACCCTGGGAATGAGG
CCGCCGATCGTCTGGCGGTGAGTGGTGCTCGACGAGGAGTTTCGGAGAAG
GCTGCAGCATTGGAAGCAGTCAGAGACATTCCGGACGAGGCTTTTGAGGA
TGATGACGACGACTTCTGATCCAGGCCTTCCCTTCTTACGAAGAAGCAAA
TGCCTTCCTTACCGGGACTCGTGTCCCCGCTGCGCGCGGCGGGACCCCCT
TGGATTCCGAACCCACGAGATTCTACGGTGTCCAGCGTGGTCGAATACCT
GGTGTTTATACGGACTGGGCAAAGGCGCAGGAGCAGATCAAAGGATTTCC
CAAACCGCGTTACAAGAAATTTTCGACAAGGGAGGAAGCAGAGGAGTTTG
CAAGGGAAGGTCAAGGGTCTGGCACTACGTTCGGAAAGACCCCGGAATCG
CAGAAGCTCGCCGGTGCACCGGGACTGATGAACGGGGTCCCTGCGGATGC
GCAGGGTATACCTTTTGAGGCGGGGAATGGCCCTCTGCCGACCGGAGCGG
AGGATGGGTTTGACCCCAACGTATTGTTGGATCCCAAAACAGGGAAAGTG
GTCTATAAATCACAGGACCAGAAGACCGCGACCAAGATGAAATCCACTGG
TCCACCGGGGATGCTGCGCATCTACACGGACGGTAGTTCTTTGAAAAATG
GCAAAGCGCTTGCCTCAGCGGGTGTCGGGGTTTACTTTGGACCTGGCGAC
TCACGATGAACGACACCACGACCACCCCTTCTCCCACTCCGGGTCCCGCC
ACGAAAGCATCTCCGACTTCGAAATCTCCCTCAGCCGTAGCCGGAACGAA
GCGCAAGCGCGCATCAGCGGCGAAATACTACGCCGTGAAGGCTGGCTATC
AGCCCGGTGTTTACTATGATTGGCATGATTGTCTGACCCAGGTCACCGGG
TACAAGGGAGCTGTCTAAATGTTTCAGAGCCCCTCAAAGGTAGTCGCCAG
ACCAATCAGCGTGCCGAGCTGACGGCCATCCTCCGGGCGCTTGACATAGC
TCCACGACACCGGGACGTGACCATATTTACAGATAGCCAATACGCGATCA
ACTGTGTGACGGTGTGGTTTACAAAGTGGCGGCGCAACAACTGGATGACC
GCTGGCAACAAGCCGGTGGACAACAAGGACTTGGTTGAATCCATTTTGTC
GAAGATCGAAGAACGCAATGAGCTGAAGGTGAAGACCTTGTTCGAATGGG
TCAAGGGACATAGCTCCCACCCTGGGAATGAGGCCGCCGATCGTCTGGCG
GTGAGTGGTGCTCGACGAGGAGTTTCGGAGAAGGCTGCAGCATTGGAAGC
AGTCAGAGACATTCCGGACGAGGCTTTTGAGGATGATGACGACGACTTCT
GATCCAGGCCTTCCCTTCTTACGAAGAAGCAAATGCCTTCCTTACCGGGA
CTCGTGTCCCCGCTGCGCGCGGCGGGACCCCCTTGGATTCCGAACCCACG
AGATTCTACGGTGTCCAGCGTGGTCGAATACCTGGTGTTTATACGGACTG
GGCAAAGGCGCAGGAGCAGATCAAAGGATTTCCCAAACCGCGTTACAAGA
AATTTTCGACAAGGGAGGAAGCAGAGGAGTTTGCAAGGGAAGGTCAAGGG
TCTGGCACTACGTTCGGAAAGACCCCGGAATCGCAGAAGCTCGCCGGTGC
ACCGGGACTGATGAACGGGGTCCCTGCGGATGCGCAGGGTATACCTTTTG
AGGCGGGGAATGGCCCTCTGCCGACCGGAGCGGAGGATGGGTTTGACCCC
AACGTATTGTTGGATCCCAAAACAGGGAAAGTGGTCTATAAATCACAGGA
CCAGAAGACCGCGACCAAGATGAAATCCACTGGTCCACCGGGGATGCTGC
GCATCTACACGGACGGTAGTTCTTTGAAAAATGGCAAAGCGCTTGCCTCA
GCGGGTGTCGGGGTTTACTTTGGACCTGGCGACTCACGATGAACGACACC
ACGACCACCCCTTCTCCCACTCCGGGTCCCGCCACGAAAGCATCTCCGAC
TTCGAAATCTCCCTCAGCCGTAGCCGGAACGAAGCGCAAGCGCGCATCAG
CGGCGAAATACTACGCCGTGAAGGCTGGCTATCAGCCCGGTGTTTACTAT
GATTGGCATGATTGTCTGACCCAGGTCACCGGGTACAAGGGAGCTGTCT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0004523RNA-DNA hybrid ribonuclease activity
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_3560CAN33_3560Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_3560-T1CAN33_3560-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_3560-T1.cdsCAN33_3560-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_3560-T1.exon3CAN33_3560-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_3560-T1.exon2CAN33_3560-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_3560-T1.exon1CAN33_3560-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR012337
DBxrefInterPro:IPR009027
DBxrefInterPro:IPR036397
DBxrefInterPro:IPR002156
DBxrefInterPro:IPR011320
DBxrefInterPro:IPR037056
DBxrefPFAM:PF00075
DBxrefPFAM:PF01693
ProductCaulimovirus viroplasmin family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000004.1supercontigNKJJ01000004.1:2280294..2281688 -
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