|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000017.1:98932..100749- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_36280-T1 ID=CAN33_36280-T1|Name=CAN33_36280-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1818bp|location=Sequence derived from alignment at NKJJ01000017.1:98932..100749- (Aspergillus niger FDAARGOS_311)
ATGCAGACTCTCCTTGTGAGCTCGCTTGTGGTCTCCCTCGCTGCGGCCCT
GCCACACTACATCAGGAGCAATGGCATTGAAGCCAGCCTCCTGACTGATC
CCAAGGATGTCTCCGGCCGCACGGTCGACTACATCATCGCTGGTGGAGGT
CTGACTGGACTCACCACCGCTGCTCGTCTGACGGAGAACCCCAACATCAG
TGTGCTCGTCATCGAAAGTGGCTCCTACGAGTCGGACAGAGGTCCTATCA
TTGAGGACCTGAACGCCTACGGCGACATCTTTGGCAGCAGTGTAGACCAC
GCCTACGAGACCGTGGAGCTCGCTACCAACAATCAAACCGCGCTGATCCG
CTCCGGAAATGGTCTCGGTGGCTCTACTCTAGTGAATGGTGGCACCTGGA
CTCGCCCCCACAAGGCACAGGTTGACTCTTGGGAGACTGTCTTTGGAAAT
GAGGGCTGGAACTGGGACAATGTGGCCGCCTACTCCCTCCAGGCTGAGCG
TGCTCGCGCACCAAATGCCAAACAGATCGCTGCTGGCCACTACTTCAACG
CATCCTGCCATGGTGTTAATGGTACTGTCCATGCCGGACCCCGCGACACC
GGCGATGACTATTCTCCCATCGTCAAGGCTCTCATGAGCGCTGTCGAAGA
CCGGGGCGTTCCCACCAAGAAAGACTTCGGATGCGGTGACCCCCATGGTG
TGTCCATGTTCCCCAACACCTTGCACGAAGACCAAGTGCGCTCCGATGCC
GCTCGCGAATGGCTACTTCCCAACTACCAACGTCCCAACCTGCAAGTCCT
GACCGGACAGTATGTTGGTAAGGTGCTCCTTAGCCAGAACGGCACCACCC
CTCGTGCCGTTGGCGTGGAATTCGGCACCCACAAGGGCAACACCCACAAC
GTTTACGCTAAGCACGAGGTCCTCCTGGCCGCGGGCTCCGCTGTCTCTCC
CACAATCCTCGAATATTCCGGTATCGGAATGAAGTCCATCCTGGAGCCCC
TTGGTATCGACACCGTCGTTGACCTGCCCGTCGGCTTGAACCTGCAGGAC
CAGACCACCGCTACCGTCCGCTCCCGCATCACCTCTGCTGGTGCAGGACA
GGGACAGGCCGCTTGGTTCGCCACCTTCAACGAGACCTTTGGTGACTATT
CCGAAAAGGCACACGAGCTGCTCAACACCAAGCTGGAGCAGTGGGCCGAA
GAGGCCGTCGCCCGTGGCGGATTCCACAACACCACCGCCTTGCTCATCCA
GTACGAGAACTACCGCGACTGGATTGTCAACCACAACGTCGCGTACTCGG
AACTCTTCCTCGACACTGCCGGAGTAGCCAGCTTCGATGTGTGGGACCTT
CTGCCCTTCACCCGAGGATACGTTCACATCCTCGACAAGGACCCCTACCT
TCACCACTTCGCCTACGACCCTCAGTACTTCCTCAACGAGCTGGACCTGC
TCGGTCAGGCTGCCGCTACTCAACTGGCCCGCAACATCTCCAACTCCGGT
GCCATGCAGACCTACTTCGCTGGGGAGACTATCCCCGGTGATAACCTCGC
GTATGATGCCGATTTGAGCGCCTGGACTGAGTACATCCCGTACCACTTCC
GTCCTAACTACCATGGCGTGGGTACTTGCTCCATGATGCCGAAGGAGATG
GGCGGTGTTGTTGATAATGCTGCCCGTGTGTATGGTGTGCAGGGACTGCG
TGTCATTGATGGTTCTATTCCTCCTACGCAAATGTCGTCCCATGTCATGA
CGGTGTTCTATGCCATGGCGCTAAAAATTTCGGATGCTATCTTGGAAGAT
TATGCTTCCATGCAGTGA back to topCoding sequence (CDS) from alignment at NKJJ01000017.1:98932..100749- >CAN33_36280-T1 ID=CAN33_36280-T1|Name=CAN33_36280-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1818bp|location=Sequence derived from alignment at NKJJ01000017.1:98932..100749- (Aspergillus niger FDAARGOS_311)
ATGCAGACTCTCCTTGTGAGCTCGCTTGTGGTCTCCCTCGCTGCGGCCCT
GCCACACTACATCAGGAGCAATGGCATTGAAGCCAGCCTCCTGACTGATC
CCAAGGATGTCTCCGGCCGCACGGTCGACTACATCATCGCTGGTGGAGGT
CTGACTGGACTCACCACCGCTGCTCGTCTGACGGAGAACCCCAACATCAG
TGTGCTCGTCATCGAAAGTGGCTCCTACGAGTCGGACAGAGGTCCTATCA
TTGAGGACCTGAACGCCTACGGCGACATCTTTGGCAGCAGTGTAGACCAC
GCCTACGAGACCGTGGAGCTCGCTACCAACAATCAAACCGCGCTGATCCG
CTCCGGAAATGGTCTCGGTGGCTCTACTCTAGTGAATGGTGGCACCTGGA
CTCGCCCCCACAAGGCACAGGTTGACTCTTGGGAGACTGTCTTTGGAAAT
GAGGGCTGGAACTGGGACAATGTGGCCGCCTACTCCCTCCAGGCTGAGCG
TGCTCGCGCACCAAATGCCAAACAGATCGCTGCTGGCCACTACTTCAACG
CATCCTGCCATGGTGTTAATGGTACTGTCCATGCCGGACCCCGCGACACC
GGCGATGACTATTCTCCCATCGTCAAGGCTCTCATGAGCGCTGTCGAAGA
CCGGGGCGTTCCCACCAAGAAAGACTTCGGATGCGGTGACCCCCATGGTG
TGTCCATGTTCCCCAACACCTTGCACGAAGACCAAGTGCGCTCCGATGCC
GCTCGCGAATGGCTACTTCCCAACTACCAACGTCCCAACCTGCAAGTCCT
GACCGGACAGTATGTTGGTAAGGTGCTCCTTAGCCAGAACGGCACCACCC
CTCGTGCCGTTGGCGTGGAATTCGGCACCCACAAGGGCAACACCCACAAC
GTTTACGCTAAGCACGAGGTCCTCCTGGCCGCGGGCTCCGCTGTCTCTCC
CACAATCCTCGAATATTCCGGTATCGGAATGAAGTCCATCCTGGAGCCCC
TTGGTATCGACACCGTCGTTGACCTGCCCGTCGGCTTGAACCTGCAGGAC
CAGACCACCGCTACCGTCCGCTCCCGCATCACCTCTGCTGGTGCAGGACA
GGGACAGGCCGCTTGGTTCGCCACCTTCAACGAGACCTTTGGTGACTATT
CCGAAAAGGCACACGAGCTGCTCAACACCAAGCTGGAGCAGTGGGCCGAA
GAGGCCGTCGCCCGTGGCGGATTCCACAACACCACCGCCTTGCTCATCCA
GTACGAGAACTACCGCGACTGGATTGTCAACCACAACGTCGCGTACTCGG
AACTCTTCCTCGACACTGCCGGAGTAGCCAGCTTCGATGTGTGGGACCTT
CTGCCCTTCACCCGAGGATACGTTCACATCCTCGACAAGGACCCCTACCT
TCACCACTTCGCCTACGACCCTCAGTACTTCCTCAACGAGCTGGACCTGC
TCGGTCAGGCTGCCGCTACTCAACTGGCCCGCAACATCTCCAACTCCGGT
GCCATGCAGACCTACTTCGCTGGGGAGACTATCCCCGGTGATAACCTCGC
GTATGATGCCGATTTGAGCGCCTGGACTGAGTACATCCCGTACCACTTCC
GTCCTAACTACCATGGCGTGGGTACTTGCTCCATGATGCCGAAGGAGATG
GGCGGTGTTGTTGATAATGCTGCCCGTGTGTATGGTGTGCAGGGACTGCG
TGTCATTGATGGTTCTATTCCTCCTACGCAAATGTCGTCCCATGTCATGA
CGGTGTTCTATGCCATGGCGCTAAAAATTTCGGATGCTATCTTGGAAGAT
TATGCTTCCATGCAGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0050660 | flavin adenine dinucleotide binding |
| GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| Note | SECRETED:SignalP(1-16) |
| Note | CAZy:AA3_3 |
| Note | CAZy:AA3 |
| Note | CAZy:AA3_2 |
| DBxref | InterPro:IPR027424 |
| DBxref | InterPro:IPR036188 |
| DBxref | InterPro:IPR012132 |
| DBxref | InterPro:IPR000172 |
| DBxref | InterPro:IPR007867 |
| DBxref | PFAM:PF00732 |
| DBxref | PFAM:PF05199 |
| Product | GMC oxidoreductase family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000017.1 | supercontig | NKJJ01000017.1:98932..100749 - |
|
