|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000017.1:129299..131008- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_36335-T1 ID=CAN33_36335-T1|Name=CAN33_36335-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1710bp|location=Sequence derived from alignment at NKJJ01000017.1:129299..131008- (Aspergillus niger FDAARGOS_311)
ATGCGTCTTTGGAAACATGACTTTCGGGGCAGGGCCCTGATCATCGCCAT
CACCATGGCCTCCTGTCAGGCCTTCCTCTTGCTGGGGTTTGACCAAGGTT
GGTAGTTTTCTTCACGGTCTCCCGGGATAGAGGATGATGATGGCTGACAA
GACGGGAATGATAGGTGTCATGTCCGGCATTGTGGGTGCGGATAATCGCT
TCGCCCGCGACTTCAATAACCCCGACGCGGCGATGCAGGGCAACATTACC
GGTCTCTACGATATCGGTTGCGTGATCGGATCCATCATTTGCTACTTCAT
CGGCGAGCGAATGGGTCGTCGAACCATGCTGATGATGGGCGGGTTCATCA
TGATCATCGGAACCGTCATCCTCGCTTCCTCCTACACAATAGCACAGCTG
CTGGTCGGCCGAATCGTTACCGGGCTGGGTAACGGAATGAACTCCTCCAC
CGCCCCCGTCTATCAGAGTGAATGTTCTCCAGCAGCATACCGTGGTGCAC
TCCTCACCCTTCAAGGAACCGTCACTATCCTGGGCGTGGTGATCGCCTAC
TGGTGAGTTCGACCCATGTTACCACACATTTACCGATGTACTAACGGAGC
AATTCTCCATAGGATGGACTACGGCACCAGCTTTACTGATTCCTCCTACG
AATGGCGGCTTCCCCTCGCCTTTCAGGCTGTCTTCGCCATCTGTCTCATC
TTGCAGGTGGTCGGTCTCCCAGAAACCCCCCGTTGGCTGGTCCAGCACGA
CCGTCATGAGGAAGCCCGCGCTGTCGTGGCTGCCATCGAAGACACCACTA
TCGATGATCCCAACGTCACCAAAACCATCATGGACATCCAATTCGTGCTG
GAGGAGGAACAAAAGGACGGTCCGTTCCGCGTCAAGGAGCTCTTTACCTG
GGGCGAAGTGCAGAACCTCCGACGTCTATTCATCACCATCACCATTGAGC
TGGGCCAACAATTCACGGGATCAAATATGATAAATTATTACGGGCCGGTG
ATGTTCCAGGAGACCATGAATATGAGCCGCAACTTGTCACTGATCCTGGG
TGGGGCCATGCAGTGTACCTACCTGGTGGGTTCGGCAATCCCGGTGTTCT
TGATGGACCGGTATGGACGGCGTACCTTACTAATGGTGTGCTCGGCCGGC
TTATGCCTGTGCTTCGTGATGGTGTCGATTCTGCTCTCCCTGGACCGCGA
GGACTGTGCCTACGGCGCGACCGTCTTCATCTTCATCTTCCAGATCTTCT
ACGGCGTGGGCTGGCTGCCCGTCCCATGGTTCTACCCAGCCGAGCTGAAC
ACAACGCGGGTTCGGACGCGGATGCAGGCCATCGCGTCCGGATGGAACTG
GATGGCCGTGTTTGCCGTGGTGAAGATCACTCCAATTGCATTTGGTGGGT
TTTGCTGCGCTTGATGAATCAGGAAGAATGACATACTGACATATGATGTA
TAGACAACATCGGCTGGCGCACCTTTGTCATCTTCGCGGTATTGAACGCC
GTATTTATCCCGATGGTGTACTTCTTTTACCCGGAGACGAAGGGACTCGA
GCTCGAGGACATCCCCTTGCTTTTCCACAAGGGTGGAATCACCGGAGGAG
TCTTCACCTCGAAGGGTGGACGCACCGTCACACCCGGCCAGCACGCGCTG
GAAGCCCGCGTGGACCAAAAGGTCGAGGGCACGGTACAGCAAGTGGAGCA
TATCGGATGA back to topCoding sequence (CDS) from alignment at NKJJ01000017.1:129299..131008- >CAN33_36335-T1 ID=CAN33_36335-T1|Name=CAN33_36335-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=6096bp|location=Sequence derived from alignment at NKJJ01000017.1:129299..131008- (Aspergillus niger FDAARGOS_311)
ACAACATCGGCTGGCGCACCTTTGTCATCTTCGCGGTATTGAACGCCGTA
TTTATCCCGATGGTGTACTTCTTTTACCCGGAGACGAAGGGACTCGAGCT
CGAGGACATCCCCTTGCTTTTCCACAAGGGTGGAATCACCGGAGGAGTCT
TCACCTCGAAGGGTGGACGCACCGTCACACCCGGCCAGCACGCGCTGGAA
GCCCGCGTGGACCAAAAGGTCGAGGGCACGGTACAGCAAGTGGAGCATAT
CGGATGAGATGGACTACGGCACCAGCTTTACTGATTCCTCCTACGAATGG
CGGCTTCCCCTCGCCTTTCAGGCTGTCTTCGCCATCTGTCTCATCTTGCA
GGTGGTCGGTCTCCCAGAAACCCCCCGTTGGCTGGTCCAGCACGACCGTC
ATGAGGAAGCCCGCGCTGTCGTGGCTGCCATCGAAGACACCACTATCGAT
GATCCCAACGTCACCAAAACCATCATGGACATCCAATTCGTGCTGGAGGA
GGAACAAAAGGACGGTCCGTTCCGCGTCAAGGAGCTCTTTACCTGGGGCG
AAGTGCAGAACCTCCGACGTCTATTCATCACCATCACCATTGAGCTGGGC
CAACAATTCACGGGATCAAATATGATAAATTATTACGGGCCGGTGATGTT
CCAGGAGACCATGAATATGAGCCGCAACTTGTCACTGATCCTGGGTGGGG
CCATGCAGTGTACCTACCTGGTGGGTTCGGCAATCCCGGTGTTCTTGATG
GACCGGTATGGACGGCGTACCTTACTAATGGTGTGCTCGGCCGGCTTATG
CCTGTGCTTCGTGATGGTGTCGATTCTGCTCTCCCTGGACCGCGAGGACT
GTGCCTACGGCGCGACCGTCTTCATCTTCATCTTCCAGATCTTCTACGGC
GTGGGCTGGCTGCCCGTCCCATGGTTCTACCCAGCCGAGCTGAACACAAC
GCGGGTTCGGACGCGGATGCAGGCCATCGCGTCCGGATGGAACTGGATGG
CCGTGTTTGCCGTGGTGAAGATCACTCCAATTGCATTTGGTGTCATGTCC
GGCATTGTGGGTGCGGATAATCGCTTCGCCCGCGACTTCAATAACCCCGA
CGCGGCGATGCAGGGCAACATTACCGGTCTCTACGATATCGGTTGCGTGA
TCGGATCCATCATTTGCTACTTCATCGGCGAGCGAATGGGTCGTCGAACC
ATGCTGATGATGGGCGGGTTCATCATGATCATCGGAACCGTCATCCTCGC
TTCCTCCTACACAATAGCACAGCTGCTGGTCGGCCGAATCGTTACCGGGC
TGGGTAACGGAATGAACTCCTCCACCGCCCCCGTCTATCAGAGTGAATGT
TCTCCAGCAGCATACCGTGGTGCACTCCTCACCCTTCAAGGAACCGTCAC
TATCCTGGGCGTGGTGATCGCCTACTGATGCGTCTTTGGAAACATGACTT
TCGGGGCAGGGCCCTGATCATCGCCATCACCATGGCCTCCTGTCAGGCCT
TCCTCTTGCTGGGGTTTGACCAAGACAACATCGGCTGGCGCACCTTTGTC
ATCTTCGCGGTATTGAACGCCGTATTTATCCCGATGGTGTACTTCTTTTA
CCCGGAGACGAAGGGACTCGAGCTCGAGGACATCCCCTTGCTTTTCCACA
AGGGTGGAATCACCGGAGGAGTCTTCACCTCGAAGGGTGGACGCACCGTC
ACACCCGGCCAGCACGCGCTGGAAGCCCGCGTGGACCAAAAGGTCGAGGG
CACGGTACAGCAAGTGGAGCATATCGGATGAGATGGACTACGGCACCAGC
TTTACTGATTCCTCCTACGAATGGCGGCTTCCCCTCGCCTTTCAGGCTGT
CTTCGCCATCTGTCTCATCTTGCAGGTGGTCGGTCTCCCAGAAACCCCCC
GTTGGCTGGTCCAGCACGACCGTCATGAGGAAGCCCGCGCTGTCGTGGCT
GCCATCGAAGACACCACTATCGATGATCCCAACGTCACCAAAACCATCAT
GGACATCCAATTCGTGCTGGAGGAGGAACAAAAGGACGGTCCGTTCCGCG
TCAAGGAGCTCTTTACCTGGGGCGAAGTGCAGAACCTCCGACGTCTATTC
ATCACCATCACCATTGAGCTGGGCCAACAATTCACGGGATCAAATATGAT
AAATTATTACGGGCCGGTGATGTTCCAGGAGACCATGAATATGAGCCGCA
ACTTGTCACTGATCCTGGGTGGGGCCATGCAGTGTACCTACCTGGTGGGT
TCGGCAATCCCGGTGTTCTTGATGGACCGGTATGGACGGCGTACCTTACT
AATGGTGTGCTCGGCCGGCTTATGCCTGTGCTTCGTGATGGTGTCGATTC
TGCTCTCCCTGGACCGCGAGGACTGTGCCTACGGCGCGACCGTCTTCATC
TTCATCTTCCAGATCTTCTACGGCGTGGGCTGGCTGCCCGTCCCATGGTT
CTACCCAGCCGAGCTGAACACAACGCGGGTTCGGACGCGGATGCAGGCCA
TCGCGTCCGGATGGAACTGGATGGCCGTGTTTGCCGTGGTGAAGATCACT
CCAATTGCATTTGGTGTCATGTCCGGCATTGTGGGTGCGGATAATCGCTT
CGCCCGCGACTTCAATAACCCCGACGCGGCGATGCAGGGCAACATTACCG
GTCTCTACGATATCGGTTGCGTGATCGGATCCATCATTTGCTACTTCATC
GGCGAGCGAATGGGTCGTCGAACCATGCTGATGATGGGCGGGTTCATCAT
GATCATCGGAACCGTCATCCTCGCTTCCTCCTACACAATAGCACAGCTGC
TGGTCGGCCGAATCGTTACCGGGCTGGGTAACGGAATGAACTCCTCCACC
GCCCCCGTCTATCAGAGTGAATGTTCTCCAGCAGCATACCGTGGTGCACT
CCTCACCCTTCAAGGAACCGTCACTATCCTGGGCGTGGTGATCGCCTACT
GATGCGTCTTTGGAAACATGACTTTCGGGGCAGGGCCCTGATCATCGCCA
TCACCATGGCCTCCTGTCAGGCCTTCCTCTTGCTGGGGTTTGACCAAGAC
AACATCGGCTGGCGCACCTTTGTCATCTTCGCGGTATTGAACGCCGTATT
TATCCCGATGGTGTACTTCTTTTACCCGGAGACGAAGGGACTCGAGCTCG
AGGACATCCCCTTGCTTTTCCACAAGGGTGGAATCACCGGAGGAGTCTTC
ACCTCGAAGGGTGGACGCACCGTCACACCCGGCCAGCACGCGCTGGAAGC
CCGCGTGGACCAAAAGGTCGAGGGCACGGTACAGCAAGTGGAGCATATCG
GATGAGATGGACTACGGCACCAGCTTTACTGATTCCTCCTACGAATGGCG
GCTTCCCCTCGCCTTTCAGGCTGTCTTCGCCATCTGTCTCATCTTGCAGG
TGGTCGGTCTCCCAGAAACCCCCCGTTGGCTGGTCCAGCACGACCGTCAT
GAGGAAGCCCGCGCTGTCGTGGCTGCCATCGAAGACACCACTATCGATGA
TCCCAACGTCACCAAAACCATCATGGACATCCAATTCGTGCTGGAGGAGG
AACAAAAGGACGGTCCGTTCCGCGTCAAGGAGCTCTTTACCTGGGGCGAA
GTGCAGAACCTCCGACGTCTATTCATCACCATCACCATTGAGCTGGGCCA
ACAATTCACGGGATCAAATATGATAAATTATTACGGGCCGGTGATGTTCC
AGGAGACCATGAATATGAGCCGCAACTTGTCACTGATCCTGGGTGGGGCC
ATGCAGTGTACCTACCTGGTGGGTTCGGCAATCCCGGTGTTCTTGATGGA
CCGGTATGGACGGCGTACCTTACTAATGGTGTGCTCGGCCGGCTTATGCC
TGTGCTTCGTGATGGTGTCGATTCTGCTCTCCCTGGACCGCGAGGACTGT
GCCTACGGCGCGACCGTCTTCATCTTCATCTTCCAGATCTTCTACGGCGT
GGGCTGGCTGCCCGTCCCATGGTTCTACCCAGCCGAGCTGAACACAACGC
GGGTTCGGACGCGGATGCAGGCCATCGCGTCCGGATGGAACTGGATGGCC
GTGTTTGCCGTGGTGAAGATCACTCCAATTGCATTTGGTGTCATGTCCGG
CATTGTGGGTGCGGATAATCGCTTCGCCCGCGACTTCAATAACCCCGACG
CGGCGATGCAGGGCAACATTACCGGTCTCTACGATATCGGTTGCGTGATC
GGATCCATCATTTGCTACTTCATCGGCGAGCGAATGGGTCGTCGAACCAT
GCTGATGATGGGCGGGTTCATCATGATCATCGGAACCGTCATCCTCGCTT
CCTCCTACACAATAGCACAGCTGCTGGTCGGCCGAATCGTTACCGGGCTG
GGTAACGGAATGAACTCCTCCACCGCCCCCGTCTATCAGAGTGAATGTTC
TCCAGCAGCATACCGTGGTGCACTCCTCACCCTTCAAGGAACCGTCACTA
TCCTGGGCGTGGTGATCGCCTACTGATGCGTCTTTGGAAACATGACTTTC
GGGGCAGGGCCCTGATCATCGCCATCACCATGGCCTCCTGTCAGGCCTTC
CTCTTGCTGGGGTTTGACCAAGACAACATCGGCTGGCGCACCTTTGTCAT
CTTCGCGGTATTGAACGCCGTATTTATCCCGATGGTGTACTTCTTTTACC
CGGAGACGAAGGGACTCGAGCTCGAGGACATCCCCTTGCTTTTCCACAAG
GGTGGAATCACCGGAGGAGTCTTCACCTCGAAGGGTGGACGCACCGTCAC
ACCCGGCCAGCACGCGCTGGAAGCCCGCGTGGACCAAAAGGTCGAGGGCA
CGGTACAGCAAGTGGAGCATATCGGATGAGATGGACTACGGCACCAGCTT
TACTGATTCCTCCTACGAATGGCGGCTTCCCCTCGCCTTTCAGGCTGTCT
TCGCCATCTGTCTCATCTTGCAGGTGGTCGGTCTCCCAGAAACCCCCCGT
TGGCTGGTCCAGCACGACCGTCATGAGGAAGCCCGCGCTGTCGTGGCTGC
CATCGAAGACACCACTATCGATGATCCCAACGTCACCAAAACCATCATGG
ACATCCAATTCGTGCTGGAGGAGGAACAAAAGGACGGTCCGTTCCGCGTC
AAGGAGCTCTTTACCTGGGGCGAAGTGCAGAACCTCCGACGTCTATTCAT
CACCATCACCATTGAGCTGGGCCAACAATTCACGGGATCAAATATGATAA
ATTATTACGGGCCGGTGATGTTCCAGGAGACCATGAATATGAGCCGCAAC
TTGTCACTGATCCTGGGTGGGGCCATGCAGTGTACCTACCTGGTGGGTTC
GGCAATCCCGGTGTTCTTGATGGACCGGTATGGACGGCGTACCTTACTAA
TGGTGTGCTCGGCCGGCTTATGCCTGTGCTTCGTGATGGTGTCGATTCTG
CTCTCCCTGGACCGCGAGGACTGTGCCTACGGCGCGACCGTCTTCATCTT
CATCTTCCAGATCTTCTACGGCGTGGGCTGGCTGCCCGTCCCATGGTTCT
ACCCAGCCGAGCTGAACACAACGCGGGTTCGGACGCGGATGCAGGCCATC
GCGTCCGGATGGAACTGGATGGCCGTGTTTGCCGTGGTGAAGATCACTCC
AATTGCATTTGGTGTCATGTCCGGCATTGTGGGTGCGGATAATCGCTTCG
CCCGCGACTTCAATAACCCCGACGCGGCGATGCAGGGCAACATTACCGGT
CTCTACGATATCGGTTGCGTGATCGGATCCATCATTTGCTACTTCATCGG
CGAGCGAATGGGTCGTCGAACCATGCTGATGATGGGCGGGTTCATCATGA
TCATCGGAACCGTCATCCTCGCTTCCTCCTACACAATAGCACAGCTGCTG
GTCGGCCGAATCGTTACCGGGCTGGGTAACGGAATGAACTCCTCCACCGC
CCCCGTCTATCAGAGTGAATGTTCTCCAGCAGCATACCGTGGTGCACTCC
TCACCCTTCAAGGAACCGTCACTATCCTGGGCGTGGTGATCGCCTACTGA
TGCGTCTTTGGAAACATGACTTTCGGGGCAGGGCCCTGATCATCGCCATC
ACCATGGCCTCCTGTCAGGCCTTCCTCTTGCTGGGGTTTGACCAAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
| GO:0016020 | membrane |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR005829 |
| DBxref | InterPro:IPR005828 |
| DBxref | InterPro:IPR003663 |
| DBxref | PFAM:PF00083 |
| DBxref | PFAM:PF07690 |
| Product | Sugar (and other) transporter family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000017.1 | supercontig | NKJJ01000017.1:129299..131008 - |
|
