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CAN33_36525-T1, CAN33_36525-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_36525-T1
Unique NameCAN33_36525-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000017.1:248021..248692-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_36525-T1 ID=CAN33_36525-T1|Name=CAN33_36525-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=672bp|location=Sequence derived from alignment at NKJJ01000017.1:248021..248692- (Aspergillus niger FDAARGOS_311)
ATGGTCAAGACTTCCGTCCTCAACGATGCGCTTAACGCCATCAACAACGC
CGAGAAGAGCGGTCGCCGTCAGGTCCTGATCCGCCCTTCCTCCAAGGTCA
TCATCAAGTTCCTTTCCGTCATGCAGAAGCACGGTACGTTCATGTCTACA
ACATCACCAACATCGTGAAACAAGGAGTTCCGGGCACTTGCAAGGTCGAG
CCGCCAAGGAGGTGATGAAAAATTCGGGTTGATAACTAGGCGACGGTTAT
AGACCAACCACGGCTTTCGCCCTTTAAGTGCCCGAGATATTGACAAGTGT
TGTTTACAACATGGCGGCGATCTTACAAGTTTCCGGAACTCTTTATTTCT
TCTGTGTTTGGTTAACTTTTAAATCACCGCAACAAATTGCTGACTCTTTT
TTCCTTCTTCAGGCTACATTGGCGAGTTCGAGGAGGTTGACGACCACCGC
TCCGGCAAGATCGTCATCCAGCTCAACGGCCGTCTGAACAAGTGCGGTGT
CATCAACCCCCGCTACCCCGTTCAGCTCCGTGACCTCGAGAAGTGGGCCA
CTCAGCTCCTGCCCTCCCGTCAGTTCGGTTACGTTGTCCTGACCACCTCC
GCTGGTATCATGGACCACGAGGAGGCTCGCCGCAAGCACGTTGCCGGCAA
GCTCCTCGGTTTCTTCTACTAA
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Coding sequence (CDS) from alignment at NKJJ01000017.1:248021..248692-

>CAN33_36525-T1 ID=CAN33_36525-T1|Name=CAN33_36525-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=786bp|location=Sequence derived from alignment at NKJJ01000017.1:248021..248692- (Aspergillus niger FDAARGOS_311)
GCTACATTGGCGAGTTCGAGGAGGTTGACGACCACCGCTCCGGCAAGATC
GTCATCCAGCTCAACGGCCGTCTGAACAAGTGCGGTGTCATCAACCCCCG
CTACCCCGTTCAGCTCCGTGACCTCGAGAAGTGGGCCACTCAGCTCCTGC
CCTCCCGTCAGTTCGGTTACGTTGTCCTGACCACCTCCGCTGGTATCATG
GACCACGAGGAGGCTCGCCGCAAGCACGTTGCCGGCAAGCTCCTCGGTTT
CTTCTACTAAATGGTCAAGACTTCCGTCCTCAACGATGCGCTTAACGCCA
TCAACAACGCCGAGAAGAGCGGTCGCCGTCAGGTCCTGATCCGCCCTTCC
TCCAAGGTCATCATCAAGTTCCTTTCCGTCATGCAGAAGCACGGCTACAT
TGGCGAGTTCGAGGAGGTTGACGACCACCGCTCCGGCAAGATCGTCATCC
AGCTCAACGGCCGTCTGAACAAGTGCGGTGTCATCAACCCCCGCTACCCC
GTTCAGCTCCGTGACCTCGAGAAGTGGGCCACTCAGCTCCTGCCCTCCCG
TCAGTTCGGTTACGTTGTCCTGACCACCTCCGCTGGTATCATGGACCACG
AGGAGGCTCGCCGCAAGCACGTTGCCGGCAAGCTCCTCGGTTTCTTCTAC
TAAATGGTCAAGACTTCCGTCCTCAACGATGCGCTTAACGCCATCAACAA
CGCCGAGAAGAGCGGTCGCCGTCAGGTCCTGATCCGCCCTTCCTCCAAGG
TCATCATCAAGTTCCTTTCCGTCATGCAGAAGCACG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CRP27CAN33_36525Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_36525-T1CAN33_36525-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_36525-T1.cdsCAN33_36525-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_36525-T1.exon2CAN33_36525-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_36525-T1.exon1CAN33_36525-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
DBxrefInterPro:IPR035987
DBxrefInterPro:IPR000630
DBxrefPFAM:PF00410
Product40S ribosomal protein S22
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000017.1supercontigNKJJ01000017.1:248021..248692 -
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