|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000017.1:270879..271871- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_36560-T1 ID=CAN33_36560-T1|Name=CAN33_36560-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=993bp|location=Sequence derived from alignment at NKJJ01000017.1:270879..271871- (Aspergillus niger FDAARGOS_311)
ATGATGCTCCAGGGAGTCGCCTTCATCACCGGTGCCGCATCAGGTCTGTA
GCACCTATCCCACTTTACCCCTCAAGCAAACTGACTGATATTCTACACAG
GCATCGGAAAAGCCACAGCCTATGCCCTCGCCCGACACGGTGTCAGCCAA
CTCGCTATCGCTGATATCAACTTCGCCGCGGCACAGGATACCGCCCAGGA
TATTGAGGCCCGCTTCAGTGGAGTGAGAGTGCTGCCGCTGAACATTGACG
TGACCGATCCGGTCTCTATCCACAAGGCTGTGTCAGAGACGGTTCAGCAA
TTCGAGAGGATTGATTATGCGGTCAATAGTGCTGGGATTGCTGGGTCAAT
GGCGTATTCGGGGGACCATGAGATTGCGGATTGGGAGAAGACGTTAGGGG
TAAATTTGCATGGGGTGTGGATGTCGAGTCGGGAGGAGATTAAGGTTATG
ATGGGACAGGAGAAGAGGGATGATAGGTGAGGCTTTTTTCTATTTAGTAT
TCTGAGATGGAGATGGAGATGGGGTTCGGTCTGTGCTAATGTGTGATGTG
TGCACTTGCTTGTTCTACAGTCCTCGCTCATCACGAGGTGTCATTGTCAA
CGTGGCATCTGCTTATGGTCTTGTTGCGACCCCTGCCAATATACCCCTCG
TTTCTTATACGGCTGCGAAACATGGTGTGGTTGGGATGAGCAAGGCTGAT
GCGATTGTCTACGCGCCTTTAGGGATTCGGATCAATGCTATCTGTCCTGG
TTATGTTCAGACACCGATGATCGATCAGATGGCTGATGAGGTGATGCGGA
AAGAAGTGTTGAGAGTCCCAGTGGGAAGATTGGCGGATGTAGAGGAAATT
GCGGATACGATTACGTTCATGCTGTCGCCGATGAGTAGCTATATGTATGG
GTCTGCGTTGGTGGTGGATGGGTAGGTCGATTCTTGAAGGTTTTTGCTGG
AGGACTTAATGCTGACAGTTATAGGGGGTTTATCGCGCAGTAA back to topCoding sequence (CDS) from alignment at NKJJ01000017.1:270879..271871- >CAN33_36560-T1 ID=CAN33_36560-T1|Name=CAN33_36560-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=3156bp|location=Sequence derived from alignment at NKJJ01000017.1:270879..271871- (Aspergillus niger FDAARGOS_311)
GGGGTTTATCGCGCAGTAATCCTCGCTCATCACGAGGTGTCATTGTCAAC
GTGGCATCTGCTTATGGTCTTGTTGCGACCCCTGCCAATATACCCCTCGT
TTCTTATACGGCTGCGAAACATGGTGTGGTTGGGATGAGCAAGGCTGATG
CGATTGTCTACGCGCCTTTAGGGATTCGGATCAATGCTATCTGTCCTGGT
TATGTTCAGACACCGATGATCGATCAGATGGCTGATGAGGTGATGCGGAA
AGAAGTGTTGAGAGTCCCAGTGGGAAGATTGGCGGATGTAGAGGAAATTG
CGGATACGATTACGTTCATGCTGTCGCCGATGAGTAGCTATATGTATGGG
TCTGCGTTGGTGGTGGATGGGCATCGGAAAAGCCACAGCCTATGCCCTCG
CCCGACACGGTGTCAGCCAACTCGCTATCGCTGATATCAACTTCGCCGCG
GCACAGGATACCGCCCAGGATATTGAGGCCCGCTTCAGTGGAGTGAGAGT
GCTGCCGCTGAACATTGACGTGACCGATCCGGTCTCTATCCACAAGGCTG
TGTCAGAGACGGTTCAGCAATTCGAGAGGATTGATTATGCGGTCAATAGT
GCTGGGATTGCTGGGTCAATGGCGTATTCGGGGGACCATGAGATTGCGGA
TTGGGAGAAGACGTTAGGGGTAAATTTGCATGGGGTGTGGATGTCGAGTC
GGGAGGAGATTAAGGTTATGATGGGACAGGAGAAGAGGGATGATAGATGA
TGCTCCAGGGAGTCGCCTTCATCACCGGTGCCGCATCAGGGGGTTTATCG
CGCAGTAATCCTCGCTCATCACGAGGTGTCATTGTCAACGTGGCATCTGC
TTATGGTCTTGTTGCGACCCCTGCCAATATACCCCTCGTTTCTTATACGG
CTGCGAAACATGGTGTGGTTGGGATGAGCAAGGCTGATGCGATTGTCTAC
GCGCCTTTAGGGATTCGGATCAATGCTATCTGTCCTGGTTATGTTCAGAC
ACCGATGATCGATCAGATGGCTGATGAGGTGATGCGGAAAGAAGTGTTGA
GAGTCCCAGTGGGAAGATTGGCGGATGTAGAGGAAATTGCGGATACGATT
ACGTTCATGCTGTCGCCGATGAGTAGCTATATGTATGGGTCTGCGTTGGT
GGTGGATGGGCATCGGAAAAGCCACAGCCTATGCCCTCGCCCGACACGGT
GTCAGCCAACTCGCTATCGCTGATATCAACTTCGCCGCGGCACAGGATAC
CGCCCAGGATATTGAGGCCCGCTTCAGTGGAGTGAGAGTGCTGCCGCTGA
ACATTGACGTGACCGATCCGGTCTCTATCCACAAGGCTGTGTCAGAGACG
GTTCAGCAATTCGAGAGGATTGATTATGCGGTCAATAGTGCTGGGATTGC
TGGGTCAATGGCGTATTCGGGGGACCATGAGATTGCGGATTGGGAGAAGA
CGTTAGGGGTAAATTTGCATGGGGTGTGGATGTCGAGTCGGGAGGAGATT
AAGGTTATGATGGGACAGGAGAAGAGGGATGATAGATGATGCTCCAGGGA
GTCGCCTTCATCACCGGTGCCGCATCAGGGGGTTTATCGCGCAGTAATCC
TCGCTCATCACGAGGTGTCATTGTCAACGTGGCATCTGCTTATGGTCTTG
TTGCGACCCCTGCCAATATACCCCTCGTTTCTTATACGGCTGCGAAACAT
GGTGTGGTTGGGATGAGCAAGGCTGATGCGATTGTCTACGCGCCTTTAGG
GATTCGGATCAATGCTATCTGTCCTGGTTATGTTCAGACACCGATGATCG
ATCAGATGGCTGATGAGGTGATGCGGAAAGAAGTGTTGAGAGTCCCAGTG
GGAAGATTGGCGGATGTAGAGGAAATTGCGGATACGATTACGTTCATGCT
GTCGCCGATGAGTAGCTATATGTATGGGTCTGCGTTGGTGGTGGATGGGC
ATCGGAAAAGCCACAGCCTATGCCCTCGCCCGACACGGTGTCAGCCAACT
CGCTATCGCTGATATCAACTTCGCCGCGGCACAGGATACCGCCCAGGATA
TTGAGGCCCGCTTCAGTGGAGTGAGAGTGCTGCCGCTGAACATTGACGTG
ACCGATCCGGTCTCTATCCACAAGGCTGTGTCAGAGACGGTTCAGCAATT
CGAGAGGATTGATTATGCGGTCAATAGTGCTGGGATTGCTGGGTCAATGG
CGTATTCGGGGGACCATGAGATTGCGGATTGGGAGAAGACGTTAGGGGTA
AATTTGCATGGGGTGTGGATGTCGAGTCGGGAGGAGATTAAGGTTATGAT
GGGACAGGAGAAGAGGGATGATAGATGATGCTCCAGGGAGTCGCCTTCAT
CACCGGTGCCGCATCAGGGGGTTTATCGCGCAGTAATCCTCGCTCATCAC
GAGGTGTCATTGTCAACGTGGCATCTGCTTATGGTCTTGTTGCGACCCCT
GCCAATATACCCCTCGTTTCTTATACGGCTGCGAAACATGGTGTGGTTGG
GATGAGCAAGGCTGATGCGATTGTCTACGCGCCTTTAGGGATTCGGATCA
ATGCTATCTGTCCTGGTTATGTTCAGACACCGATGATCGATCAGATGGCT
GATGAGGTGATGCGGAAAGAAGTGTTGAGAGTCCCAGTGGGAAGATTGGC
GGATGTAGAGGAAATTGCGGATACGATTACGTTCATGCTGTCGCCGATGA
GTAGCTATATGTATGGGTCTGCGTTGGTGGTGGATGGGCATCGGAAAAGC
CACAGCCTATGCCCTCGCCCGACACGGTGTCAGCCAACTCGCTATCGCTG
ATATCAACTTCGCCGCGGCACAGGATACCGCCCAGGATATTGAGGCCCGC
TTCAGTGGAGTGAGAGTGCTGCCGCTGAACATTGACGTGACCGATCCGGT
CTCTATCCACAAGGCTGTGTCAGAGACGGTTCAGCAATTCGAGAGGATTG
ATTATGCGGTCAATAGTGCTGGGATTGCTGGGTCAATGGCGTATTCGGGG
GACCATGAGATTGCGGATTGGGAGAAGACGTTAGGGGTAAATTTGCATGG
GGTGTGGATGTCGAGTCGGGAGGAGATTAAGGTTATGATGGGACAGGAGA
AGAGGGATGATAGATGATGCTCCAGGGAGTCGCCTTCATCACCGGTGCCG
CATCAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR002347 |
| DBxref | PFAM:PF08659 |
| DBxref | PFAM:PF13561 |
| DBxref | PFAM:PF00106 |
| Product | short chain dehydrogenase family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000017.1 | supercontig | NKJJ01000017.1:270879..271871 - |
|
