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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000017.1:467753..468677- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_36845-T1 ID=CAN33_36845-T1|Name=CAN33_36845-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=925bp|location=Sequence derived from alignment at NKJJ01000017.1:467753..468677- (Aspergillus niger FDAARGOS_311)
ATGACTATTATGGACTCCAAAGCTCCACTCCATCCCTACTACCCCCTCAA
TGCTCAAATCTACGATTATGCTCCCAATGAGGCTTCCTTGTTCAGTATCC
TCACTACTGCTAGCGTTGGCGCGGCAGCTTTGCTGGGAATCATTTTCACC
CTGAGCGGTAGACTCCGACCAGCGCTAACAAAAGCCGACCGTCTTGCTAT
TCTGTGGTTTGCCCTCTGTAAGTTGGACTCTATAGTTACGTACTATTGCG
ACAGCGAGACAACAATTCTCGATGCTAATTGCGGTGTGAACTCCAAGCGG
GTACGATTCACTGCTTCTTCGAGGGTTATTTTATGATCAACCATGCTCGT
ATGGCATCTGCGCAAGACTTCTTCGGTCAACTATGGAAGGAATATGCCCT
GTCGGATTCGCGATACATGACCTCAGATACCCTCGTCTTGTGTATGGAGA
CTATCACGGTCGTAGGTGCACCCGTGGCTGCAGGGACCCCTGCTCATTGT
CTTCCTTAGCTCCGCCTGCGACACTGTTGCTAAACTACTGGAATAGCTTC
TTTGGGGCCCGCTCTGTTTTCTGGTTGCATACTTGACCCTTTCTCAGCAT
CCTCTGCGCCATCCGCTGCAGATCATCGTGTGCATGAGCCACCTCTATGG
CGATGCTCTTTACTATGCGACCAGCTTGTTCGATCACTACGTTCATGACC
GACCGTACTGCCGCCCGGAGCCTTACTACTTTTGGGTGTACTATTTCCTG
ATGAATTTCATCTGGATTGTGGTTCCGTTCTGTACGTTCCCCACGGATCC
CTTGCTTGATTTCCACTCGTCTTGGGCTAATGATGGACATAGACTATCTT
TACCAGAGTATCCGGACAACAACGGAGGCCCTCAGAGTCTTGGAAAATCC
TTCCAGACAGCGCAAGGACCGATAA back to topCoding sequence (CDS) from alignment at NKJJ01000017.1:467753..468677- >CAN33_36845-T1 ID=CAN33_36845-T1|Name=CAN33_36845-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2796bp|location=Sequence derived from alignment at NKJJ01000017.1:467753..468677- (Aspergillus niger FDAARGOS_311)
ACTATCTTTACCAGAGTATCCGGACAACAACGGAGGCCCTCAGAGTCTTG
GAAAATCCTTCCAGACAGCGCAAGGACCGATAACTTCTTTGGGGCCCGCT
CTGTTTTCTGGTTGCATACTTGACCCTTTCTCAGCATCCTCTGCGCCATC
CGCTGCAGATCATCGTGTGCATGAGCCACCTCTATGGCGATGCTCTTTAC
TATGCGACCAGCTTGTTCGATCACTACGTTCATGACCGACCGTACTGCCG
CCCGGAGCCTTACTACTTTTGGGTGTACTATTTCCTGATGAATTTCATCT
GGATTGTGGTTCCGTTCTCGGGTACGATTCACTGCTTCTTCGAGGGTTAT
TTTATGATCAACCATGCTCGTATGGCATCTGCGCAAGACTTCTTCGGTCA
ACTATGGAAGGAATATGCCCTGTCGGATTCGCGATACATGACCTCAGATA
CCCTCGTCTTGTGTATGGAGACTATCACGGTCATGACTATTATGGACTCC
AAAGCTCCACTCCATCCCTACTACCCCCTCAATGCTCAAATCTACGATTA
TGCTCCCAATGAGGCTTCCTTGTTCAGTATCCTCACTACTGCTAGCGTTG
GCGCGGCAGCTTTGCTGGGAATCATTTTCACCCTGAGCGGTAGACTCCGA
CCAGCGCTAACAAAAGCCGACCGTCTTGCTATTCTGTGGTTTGCCCTCTA
CTATCTTTACCAGAGTATCCGGACAACAACGGAGGCCCTCAGAGTCTTGG
AAAATCCTTCCAGACAGCGCAAGGACCGATAACTTCTTTGGGGCCCGCTC
TGTTTTCTGGTTGCATACTTGACCCTTTCTCAGCATCCTCTGCGCCATCC
GCTGCAGATCATCGTGTGCATGAGCCACCTCTATGGCGATGCTCTTTACT
ATGCGACCAGCTTGTTCGATCACTACGTTCATGACCGACCGTACTGCCGC
CCGGAGCCTTACTACTTTTGGGTGTACTATTTCCTGATGAATTTCATCTG
GATTGTGGTTCCGTTCTCGGGTACGATTCACTGCTTCTTCGAGGGTTATT
TTATGATCAACCATGCTCGTATGGCATCTGCGCAAGACTTCTTCGGTCAA
CTATGGAAGGAATATGCCCTGTCGGATTCGCGATACATGACCTCAGATAC
CCTCGTCTTGTGTATGGAGACTATCACGGTCATGACTATTATGGACTCCA
AAGCTCCACTCCATCCCTACTACCCCCTCAATGCTCAAATCTACGATTAT
GCTCCCAATGAGGCTTCCTTGTTCAGTATCCTCACTACTGCTAGCGTTGG
CGCGGCAGCTTTGCTGGGAATCATTTTCACCCTGAGCGGTAGACTCCGAC
CAGCGCTAACAAAAGCCGACCGTCTTGCTATTCTGTGGTTTGCCCTCTAC
TATCTTTACCAGAGTATCCGGACAACAACGGAGGCCCTCAGAGTCTTGGA
AAATCCTTCCAGACAGCGCAAGGACCGATAACTTCTTTGGGGCCCGCTCT
GTTTTCTGGTTGCATACTTGACCCTTTCTCAGCATCCTCTGCGCCATCCG
CTGCAGATCATCGTGTGCATGAGCCACCTCTATGGCGATGCTCTTTACTA
TGCGACCAGCTTGTTCGATCACTACGTTCATGACCGACCGTACTGCCGCC
CGGAGCCTTACTACTTTTGGGTGTACTATTTCCTGATGAATTTCATCTGG
ATTGTGGTTCCGTTCTCGGGTACGATTCACTGCTTCTTCGAGGGTTATTT
TATGATCAACCATGCTCGTATGGCATCTGCGCAAGACTTCTTCGGTCAAC
TATGGAAGGAATATGCCCTGTCGGATTCGCGATACATGACCTCAGATACC
CTCGTCTTGTGTATGGAGACTATCACGGTCATGACTATTATGGACTCCAA
AGCTCCACTCCATCCCTACTACCCCCTCAATGCTCAAATCTACGATTATG
CTCCCAATGAGGCTTCCTTGTTCAGTATCCTCACTACTGCTAGCGTTGGC
GCGGCAGCTTTGCTGGGAATCATTTTCACCCTGAGCGGTAGACTCCGACC
AGCGCTAACAAAAGCCGACCGTCTTGCTATTCTGTGGTTTGCCCTCTACT
ATCTTTACCAGAGTATCCGGACAACAACGGAGGCCCTCAGAGTCTTGGAA
AATCCTTCCAGACAGCGCAAGGACCGATAACTTCTTTGGGGCCCGCTCTG
TTTTCTGGTTGCATACTTGACCCTTTCTCAGCATCCTCTGCGCCATCCGC
TGCAGATCATCGTGTGCATGAGCCACCTCTATGGCGATGCTCTTTACTAT
GCGACCAGCTTGTTCGATCACTACGTTCATGACCGACCGTACTGCCGCCC
GGAGCCTTACTACTTTTGGGTGTACTATTTCCTGATGAATTTCATCTGGA
TTGTGGTTCCGTTCTCGGGTACGATTCACTGCTTCTTCGAGGGTTATTTT
ATGATCAACCATGCTCGTATGGCATCTGCGCAAGACTTCTTCGGTCAACT
ATGGAAGGAATATGCCCTGTCGGATTCGCGATACATGACCTCAGATACCC
TCGTCTTGTGTATGGAGACTATCACGGTCATGACTATTATGGACTCCAAA
GCTCCACTCCATCCCTACTACCCCCTCAATGCTCAAATCTACGATTATGC
TCCCAATGAGGCTTCCTTGTTCAGTATCCTCACTACTGCTAGCGTTGGCG
CGGCAGCTTTGCTGGGAATCATTTTCACCCTGAGCGGTAGACTCCGACCA
GCGCTAACAAAAGCCGACCGTCTTGCTATTCTGTGGTTTGCCCTCT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0016125 | sterol metabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0047750 | cholestenol delta-isomerase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR033118 |
| DBxref | InterPro:IPR007905 |
| DBxref | PFAM:PF05241 |
| Product | Emopamil binding protein family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000017.1 | supercontig | NKJJ01000017.1:467753..468677 - |
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