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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000017.1:496278..498428- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_36890-T1 ID=CAN33_36890-T1|Name=CAN33_36890-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2151bp|location=Sequence derived from alignment at NKJJ01000017.1:496278..498428- (Aspergillus niger FDAARGOS_311)
ATGCCCATGTACGTGTCTCCCACTAATGCTCAATTTCCTCAATTCTGGTC
GTGTCTGCAATAGAAGCATGTTTTCCGCAGTCATACTTGACCGTTGCATC
AGTTGACTCACATCCACTGACTCTGTATCCAGGCTCAAGGACCCCTCCCA
GAAATACAAGCGCTTTCAGCCCCTCCACCTTCCCGACCGCCAATGGCCCA
ACAAGACCATCGACAACCCGCCCCGGTGGCTGGCCACCGATCTGCGTGAT
GGCAACCAGAGTCTGCCCGACCCTATGGTAAGTTCATGACAGTGTCTAGT
TAGGGGCGAGAAGAATAGCGGGACCCAGCTGACCACTTCTCTCGTGAAAC
ACACAGGATGGGCAACAAAAACTCCGTTTCTTCAAGATGCTCGTCGACAT
TGGCTACAAGGAAATCGAAGTCTCTTTCCCCTCCGCCTCGCAAACCGACT
TCGACTTCACCCGTAGCCTGGTTGAGACTCCCGGTCTGTGCCCCGATGAT
GTCTGGCTCCAGGTCCTCTCCCCCTGCAGAGAAGATCTGATCCGTCGTAC
GGTCGATTCCCTGAAGGGTGCCAAGAAGGCTATTCTGCACATCTACCTGG
CTACCAGCCCCTGCTTCCGTCGCATCGTGTTCAACATGGACAAGCAGAAG
AGTCTGGAGATGGCCGTGCGCTGCACCAAGTATGCTCGCTCAATCACCAA
GGATGACCCGTCGACAGCCGGAACCGAATGGCACTTTGAGTTCTCCCCCG
AGACCTTCTCCGACACCGAGCCCGAGTTCGCTGCTCAAGTCTGTGAAGCC
GTCAAGGCGGCGTGGGAGCCCACGGAGAAGGACCCCATCATCTTCAACCT
GCCGGCTACGGTAGAGATGTCTACCCCCAACGTCTTCGCCGACCAGGTCG
AGTACTTCTGCCGTAATGTCTCCGAGCGCGAGAAGTACGTCGTGTCCATC
CACCCCCACAATGACCGTGGCTGCGCCATTGCCGCCGCCGAACTCGCTCA
GATGGCCGGTGCCCAGCGAGTAGAAGGAACCCTGTTCGGAAACGGCGAGC
GCACGGGTAACGTGGACTTGGTCACCTTGGCTCTCAACTTGTACACCCAG
GGAATCTCCCCCAAGGTGGACTTCTCCGATATCAATGCGGTCATCAAGGT
GGTCGAGGAAAGCAACAAGATCCCCGTCAACGAGAGATGGCCCTATGGTG
GTCAGCTGGTCGTCTGCGCCTTCAGTGGCAGTCACCAGGATGCCATCAAG
AAGGGATTCAAGCTGCGCGAGACCGCCAGCCCCGATGCCAAGTGGGAAAT
TCCCTACCTCCCCTTGGACCCCGAGGACATTGGCCGGAACTACGAGGCCG
TCATCCGTGTCAACTCCCAGAGTGGCAAGGGTGGTGCCGCCTGGGTTATC
CTGCGCAGTCTGGAGCTGGATCTCCCGCGCGCCCTGCAGGTCGAGTTCAG
CAAGATCGTGCAGCGCAGAACCGAAGAAGTCAGCCGCGAGCTGCGCCCCT
CCGAAGTCGTCGAGCTTTTCCAGGAAGCCTACCACCTCAAGTCCAACCCC
CGCTTCAACCTGGTCGACTACAACATCACCACGGATCGTTCGCAGTCGCC
TGCGCCTCCTGAGCCCGGCAAGGCCCTCAACACCAAGAACCTCAAGCGTC
GCTTCACCGGTGTCATCGAAATCGACGGCATCCAGCACGCCATCACTGGT
GTCGGTCCCGGTGCCATCTCCTCCCTGGCCCACGCCCTGGCCACTCTGGG
CATCGATCTCGACGTCGTCGACTACAAGGAGCACTCCATCGGTCTGGGTC
GTGATGTCAAGGCCGCGACGTATATCCAGTGCACTGCGGCAGGCAGCAAG
GAACAAGTCTGGGGTGTTGGTATCCACCAGGATGTGGTCCAGGCTAGTTT
GATCGCCCTGCTCAGCGCCGCCAGCTCCGTATGTTCCCCCGGAACCTATT
CATCTATGAAGAATTACATCCACTAACATGTACTCTCTTGATTAGTTCCT
GACCAGCCGCTCCGGCTCCCCCGCTCCCTTCCGCCCCATCCGCTCCAACA
CCCTCACCGACGACGACCTCCAAGCTCTGGAAATGCTGAACGGTCCCAGC
AAGCCCAAGGTTGACATTGACGCTCTGACCAAGCAGGCTGAGAGCCAGTA
A back to topCoding sequence (CDS) from alignment at NKJJ01000017.1:496278..498428- >CAN33_36890-T1 ID=CAN33_36890-T1|Name=CAN33_36890-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=7524bp|location=Sequence derived from alignment at NKJJ01000017.1:496278..498428- (Aspergillus niger FDAARGOS_311)
TTCCTGACCAGCCGCTCCGGCTCCCCCGCTCCCTTCCGCCCCATCCGCTC
CAACACCCTCACCGACGACGACCTCCAAGCTCTGGAAATGCTGAACGGTC
CCAGCAAGCCCAAGGTTGACATTGACGCTCTGACCAAGCAGGCTGAGAGC
CAGTAAGATGGGCAACAAAAACTCCGTTTCTTCAAGATGCTCGTCGACAT
TGGCTACAAGGAAATCGAAGTCTCTTTCCCCTCCGCCTCGCAAACCGACT
TCGACTTCACCCGTAGCCTGGTTGAGACTCCCGGTCTGTGCCCCGATGAT
GTCTGGCTCCAGGTCCTCTCCCCCTGCAGAGAAGATCTGATCCGTCGTAC
GGTCGATTCCCTGAAGGGTGCCAAGAAGGCTATTCTGCACATCTACCTGG
CTACCAGCCCCTGCTTCCGTCGCATCGTGTTCAACATGGACAAGCAGAAG
AGTCTGGAGATGGCCGTGCGCTGCACCAAGTATGCTCGCTCAATCACCAA
GGATGACCCGTCGACAGCCGGAACCGAATGGCACTTTGAGTTCTCCCCCG
AGACCTTCTCCGACACCGAGCCCGAGTTCGCTGCTCAAGTCTGTGAAGCC
GTCAAGGCGGCGTGGGAGCCCACGGAGAAGGACCCCATCATCTTCAACCT
GCCGGCTACGGTAGAGATGTCTACCCCCAACGTCTTCGCCGACCAGGTCG
AGTACTTCTGCCGTAATGTCTCCGAGCGCGAGAAGTACGTCGTGTCCATC
CACCCCCACAATGACCGTGGCTGCGCCATTGCCGCCGCCGAACTCGCTCA
GATGGCCGGTGCCCAGCGAGTAGAAGGAACCCTGTTCGGAAACGGCGAGC
GCACGGGTAACGTGGACTTGGTCACCTTGGCTCTCAACTTGTACACCCAG
GGAATCTCCCCCAAGGTGGACTTCTCCGATATCAATGCGGTCATCAAGGT
GGTCGAGGAAAGCAACAAGATCCCCGTCAACGAGAGATGGCCCTATGGTG
GTCAGCTGGTCGTCTGCGCCTTCAGTGGCAGTCACCAGGATGCCATCAAG
AAGGGATTCAAGCTGCGCGAGACCGCCAGCCCCGATGCCAAGTGGGAAAT
TCCCTACCTCCCCTTGGACCCCGAGGACATTGGCCGGAACTACGAGGCCG
TCATCCGTGTCAACTCCCAGAGTGGCAAGGGTGGTGCCGCCTGGGTTATC
CTGCGCAGTCTGGAGCTGGATCTCCCGCGCGCCCTGCAGGTCGAGTTCAG
CAAGATCGTGCAGCGCAGAACCGAAGAAGTCAGCCGCGAGCTGCGCCCCT
CCGAAGTCGTCGAGCTTTTCCAGGAAGCCTACCACCTCAAGTCCAACCCC
CGCTTCAACCTGGTCGACTACAACATCACCACGGATCGTTCGCAGTCGCC
TGCGCCTCCTGAGCCCGGCAAGGCCCTCAACACCAAGAACCTCAAGCGTC
GCTTCACCGGTGTCATCGAAATCGACGGCATCCAGCACGCCATCACTGGT
GTCGGTCCCGGTGCCATCTCCTCCCTGGCCCACGCCCTGGCCACTCTGGG
CATCGATCTCGACGTCGTCGACTACAAGGAGCACTCCATCGGTCTGGGTC
GTGATGTCAAGGCCGCGACGTATATCCAGTGCACTGCGGCAGGCAGCAAG
GAACAAGTCTGGGGTGTTGGTATCCACCAGGATGTGGTCCAGGCTAGTTT
GATCGCCCTGCTCAGCGCCGCCAGCTCCGCTCAAGGACCCCTCCCAGAAA
TACAAGCGCTTTCAGCCCCTCCACCTTCCCGACCGCCAATGGCCCAACAA
GACCATCGACAACCCGCCCCGGTGGCTGGCCACCGATCTGCGTGATGGCA
ACCAGAGTCTGCCCGACCCTATGATGCCCATTTCCTGACCAGCCGCTCCG
GCTCCCCCGCTCCCTTCCGCCCCATCCGCTCCAACACCCTCACCGACGAC
GACCTCCAAGCTCTGGAAATGCTGAACGGTCCCAGCAAGCCCAAGGTTGA
CATTGACGCTCTGACCAAGCAGGCTGAGAGCCAGTAAGATGGGCAACAAA
AACTCCGTTTCTTCAAGATGCTCGTCGACATTGGCTACAAGGAAATCGAA
GTCTCTTTCCCCTCCGCCTCGCAAACCGACTTCGACTTCACCCGTAGCCT
GGTTGAGACTCCCGGTCTGTGCCCCGATGATGTCTGGCTCCAGGTCCTCT
CCCCCTGCAGAGAAGATCTGATCCGTCGTACGGTCGATTCCCTGAAGGGT
GCCAAGAAGGCTATTCTGCACATCTACCTGGCTACCAGCCCCTGCTTCCG
TCGCATCGTGTTCAACATGGACAAGCAGAAGAGTCTGGAGATGGCCGTGC
GCTGCACCAAGTATGCTCGCTCAATCACCAAGGATGACCCGTCGACAGCC
GGAACCGAATGGCACTTTGAGTTCTCCCCCGAGACCTTCTCCGACACCGA
GCCCGAGTTCGCTGCTCAAGTCTGTGAAGCCGTCAAGGCGGCGTGGGAGC
CCACGGAGAAGGACCCCATCATCTTCAACCTGCCGGCTACGGTAGAGATG
TCTACCCCCAACGTCTTCGCCGACCAGGTCGAGTACTTCTGCCGTAATGT
CTCCGAGCGCGAGAAGTACGTCGTGTCCATCCACCCCCACAATGACCGTG
GCTGCGCCATTGCCGCCGCCGAACTCGCTCAGATGGCCGGTGCCCAGCGA
GTAGAAGGAACCCTGTTCGGAAACGGCGAGCGCACGGGTAACGTGGACTT
GGTCACCTTGGCTCTCAACTTGTACACCCAGGGAATCTCCCCCAAGGTGG
ACTTCTCCGATATCAATGCGGTCATCAAGGTGGTCGAGGAAAGCAACAAG
ATCCCCGTCAACGAGAGATGGCCCTATGGTGGTCAGCTGGTCGTCTGCGC
CTTCAGTGGCAGTCACCAGGATGCCATCAAGAAGGGATTCAAGCTGCGCG
AGACCGCCAGCCCCGATGCCAAGTGGGAAATTCCCTACCTCCCCTTGGAC
CCCGAGGACATTGGCCGGAACTACGAGGCCGTCATCCGTGTCAACTCCCA
GAGTGGCAAGGGTGGTGCCGCCTGGGTTATCCTGCGCAGTCTGGAGCTGG
ATCTCCCGCGCGCCCTGCAGGTCGAGTTCAGCAAGATCGTGCAGCGCAGA
ACCGAAGAAGTCAGCCGCGAGCTGCGCCCCTCCGAAGTCGTCGAGCTTTT
CCAGGAAGCCTACCACCTCAAGTCCAACCCCCGCTTCAACCTGGTCGACT
ACAACATCACCACGGATCGTTCGCAGTCGCCTGCGCCTCCTGAGCCCGGC
AAGGCCCTCAACACCAAGAACCTCAAGCGTCGCTTCACCGGTGTCATCGA
AATCGACGGCATCCAGCACGCCATCACTGGTGTCGGTCCCGGTGCCATCT
CCTCCCTGGCCCACGCCCTGGCCACTCTGGGCATCGATCTCGACGTCGTC
GACTACAAGGAGCACTCCATCGGTCTGGGTCGTGATGTCAAGGCCGCGAC
GTATATCCAGTGCACTGCGGCAGGCAGCAAGGAACAAGTCTGGGGTGTTG
GTATCCACCAGGATGTGGTCCAGGCTAGTTTGATCGCCCTGCTCAGCGCC
GCCAGCTCCGCTCAAGGACCCCTCCCAGAAATACAAGCGCTTTCAGCCCC
TCCACCTTCCCGACCGCCAATGGCCCAACAAGACCATCGACAACCCGCCC
CGGTGGCTGGCCACCGATCTGCGTGATGGCAACCAGAGTCTGCCCGACCC
TATGATGCCCATTTCCTGACCAGCCGCTCCGGCTCCCCCGCTCCCTTCCG
CCCCATCCGCTCCAACACCCTCACCGACGACGACCTCCAAGCTCTGGAAA
TGCTGAACGGTCCCAGCAAGCCCAAGGTTGACATTGACGCTCTGACCAAG
CAGGCTGAGAGCCAGTAAGATGGGCAACAAAAACTCCGTTTCTTCAAGAT
GCTCGTCGACATTGGCTACAAGGAAATCGAAGTCTCTTTCCCCTCCGCCT
CGCAAACCGACTTCGACTTCACCCGTAGCCTGGTTGAGACTCCCGGTCTG
TGCCCCGATGATGTCTGGCTCCAGGTCCTCTCCCCCTGCAGAGAAGATCT
GATCCGTCGTACGGTCGATTCCCTGAAGGGTGCCAAGAAGGCTATTCTGC
ACATCTACCTGGCTACCAGCCCCTGCTTCCGTCGCATCGTGTTCAACATG
GACAAGCAGAAGAGTCTGGAGATGGCCGTGCGCTGCACCAAGTATGCTCG
CTCAATCACCAAGGATGACCCGTCGACAGCCGGAACCGAATGGCACTTTG
AGTTCTCCCCCGAGACCTTCTCCGACACCGAGCCCGAGTTCGCTGCTCAA
GTCTGTGAAGCCGTCAAGGCGGCGTGGGAGCCCACGGAGAAGGACCCCAT
CATCTTCAACCTGCCGGCTACGGTAGAGATGTCTACCCCCAACGTCTTCG
CCGACCAGGTCGAGTACTTCTGCCGTAATGTCTCCGAGCGCGAGAAGTAC
GTCGTGTCCATCCACCCCCACAATGACCGTGGCTGCGCCATTGCCGCCGC
CGAACTCGCTCAGATGGCCGGTGCCCAGCGAGTAGAAGGAACCCTGTTCG
GAAACGGCGAGCGCACGGGTAACGTGGACTTGGTCACCTTGGCTCTCAAC
TTGTACACCCAGGGAATCTCCCCCAAGGTGGACTTCTCCGATATCAATGC
GGTCATCAAGGTGGTCGAGGAAAGCAACAAGATCCCCGTCAACGAGAGAT
GGCCCTATGGTGGTCAGCTGGTCGTCTGCGCCTTCAGTGGCAGTCACCAG
GATGCCATCAAGAAGGGATTCAAGCTGCGCGAGACCGCCAGCCCCGATGC
CAAGTGGGAAATTCCCTACCTCCCCTTGGACCCCGAGGACATTGGCCGGA
ACTACGAGGCCGTCATCCGTGTCAACTCCCAGAGTGGCAAGGGTGGTGCC
GCCTGGGTTATCCTGCGCAGTCTGGAGCTGGATCTCCCGCGCGCCCTGCA
GGTCGAGTTCAGCAAGATCGTGCAGCGCAGAACCGAAGAAGTCAGCCGCG
AGCTGCGCCCCTCCGAAGTCGTCGAGCTTTTCCAGGAAGCCTACCACCTC
AAGTCCAACCCCCGCTTCAACCTGGTCGACTACAACATCACCACGGATCG
TTCGCAGTCGCCTGCGCCTCCTGAGCCCGGCAAGGCCCTCAACACCAAGA
ACCTCAAGCGTCGCTTCACCGGTGTCATCGAAATCGACGGCATCCAGCAC
GCCATCACTGGTGTCGGTCCCGGTGCCATCTCCTCCCTGGCCCACGCCCT
GGCCACTCTGGGCATCGATCTCGACGTCGTCGACTACAAGGAGCACTCCA
TCGGTCTGGGTCGTGATGTCAAGGCCGCGACGTATATCCAGTGCACTGCG
GCAGGCAGCAAGGAACAAGTCTGGGGTGTTGGTATCCACCAGGATGTGGT
CCAGGCTAGTTTGATCGCCCTGCTCAGCGCCGCCAGCTCCGCTCAAGGAC
CCCTCCCAGAAATACAAGCGCTTTCAGCCCCTCCACCTTCCCGACCGCCA
ATGGCCCAACAAGACCATCGACAACCCGCCCCGGTGGCTGGCCACCGATC
TGCGTGATGGCAACCAGAGTCTGCCCGACCCTATGATGCCCATTTCCTGA
CCAGCCGCTCCGGCTCCCCCGCTCCCTTCCGCCCCATCCGCTCCAACACC
CTCACCGACGACGACCTCCAAGCTCTGGAAATGCTGAACGGTCCCAGCAA
GCCCAAGGTTGACATTGACGCTCTGACCAAGCAGGCTGAGAGCCAGTAAG
ATGGGCAACAAAAACTCCGTTTCTTCAAGATGCTCGTCGACATTGGCTAC
AAGGAAATCGAAGTCTCTTTCCCCTCCGCCTCGCAAACCGACTTCGACTT
CACCCGTAGCCTGGTTGAGACTCCCGGTCTGTGCCCCGATGATGTCTGGC
TCCAGGTCCTCTCCCCCTGCAGAGAAGATCTGATCCGTCGTACGGTCGAT
TCCCTGAAGGGTGCCAAGAAGGCTATTCTGCACATCTACCTGGCTACCAG
CCCCTGCTTCCGTCGCATCGTGTTCAACATGGACAAGCAGAAGAGTCTGG
AGATGGCCGTGCGCTGCACCAAGTATGCTCGCTCAATCACCAAGGATGAC
CCGTCGACAGCCGGAACCGAATGGCACTTTGAGTTCTCCCCCGAGACCTT
CTCCGACACCGAGCCCGAGTTCGCTGCTCAAGTCTGTGAAGCCGTCAAGG
CGGCGTGGGAGCCCACGGAGAAGGACCCCATCATCTTCAACCTGCCGGCT
ACGGTAGAGATGTCTACCCCCAACGTCTTCGCCGACCAGGTCGAGTACTT
CTGCCGTAATGTCTCCGAGCGCGAGAAGTACGTCGTGTCCATCCACCCCC
ACAATGACCGTGGCTGCGCCATTGCCGCCGCCGAACTCGCTCAGATGGCC
GGTGCCCAGCGAGTAGAAGGAACCCTGTTCGGAAACGGCGAGCGCACGGG
TAACGTGGACTTGGTCACCTTGGCTCTCAACTTGTACACCCAGGGAATCT
CCCCCAAGGTGGACTTCTCCGATATCAATGCGGTCATCAAGGTGGTCGAG
GAAAGCAACAAGATCCCCGTCAACGAGAGATGGCCCTATGGTGGTCAGCT
GGTCGTCTGCGCCTTCAGTGGCAGTCACCAGGATGCCATCAAGAAGGGAT
TCAAGCTGCGCGAGACCGCCAGCCCCGATGCCAAGTGGGAAATTCCCTAC
CTCCCCTTGGACCCCGAGGACATTGGCCGGAACTACGAGGCCGTCATCCG
TGTCAACTCCCAGAGTGGCAAGGGTGGTGCCGCCTGGGTTATCCTGCGCA
GTCTGGAGCTGGATCTCCCGCGCGCCCTGCAGGTCGAGTTCAGCAAGATC
GTGCAGCGCAGAACCGAAGAAGTCAGCCGCGAGCTGCGCCCCTCCGAAGT
CGTCGAGCTTTTCCAGGAAGCCTACCACCTCAAGTCCAACCCCCGCTTCA
ACCTGGTCGACTACAACATCACCACGGATCGTTCGCAGTCGCCTGCGCCT
CCTGAGCCCGGCAAGGCCCTCAACACCAAGAACCTCAAGCGTCGCTTCAC
CGGTGTCATCGAAATCGACGGCATCCAGCACGCCATCACTGGTGTCGGTC
CCGGTGCCATCTCCTCCCTGGCCCACGCCCTGGCCACTCTGGGCATCGAT
CTCGACGTCGTCGACTACAAGGAGCACTCCATCGGTCTGGGTCGTGATGT
CAAGGCCGCGACGTATATCCAGTGCACTGCGGCAGGCAGCAAGGAACAAG
TCTGGGGTGTTGGTATCCACCAGGATGTGGTCCAGGCTAGTTTGATCGCC
CTGCTCAGCGCCGCCAGCTCCGCTCAAGGACCCCTCCCAGAAATACAAGC
GCTTTCAGCCCCTCCACCTTCCCGACCGCCAATGGCCCAACAAGACCATC
GACAACCCGCCCCGGTGGCTGGCCACCGATCTGCGTGATGGCAACCAGAG
TCTGCCCGACCCTATGATGCCCAT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0046912 | transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer |
| GO:0003824 | catalytic activity |
| GO:0003852 | 2-isopropylmalate synthase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0019752 | carboxylic acid metabolic process |
| GO:0009098 | leucine biosynthetic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_10000171.2 |
| Note | SMCOG1271:2-isopropylmalate synthase |
| DBxref | InterPro:IPR036230 |
| DBxref | InterPro:IPR039371 |
| DBxref | InterPro:IPR002034 |
| DBxref | InterPro:IPR000891 |
| DBxref | InterPro:IPR005668 |
| DBxref | InterPro:IPR013785 |
| DBxref | InterPro:IPR013709 |
| DBxref | PFAM:PF08502 |
| DBxref | PFAM:PF00682 |
| Product | 2-isopropylmalate synthase |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000017.1 | supercontig | NKJJ01000017.1:496278..498428 - |
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