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CAN33_3695-T1, CAN33_3695-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_3695-T1
Unique NameCAN33_3695-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000004.1:2358499..2359049-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_3695-T1 ID=CAN33_3695-T1|Name=CAN33_3695-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=551bp|location=Sequence derived from alignment at NKJJ01000004.1:2358499..2359049- (Aspergillus niger FDAARGOS_311)
ATGCGTTCCAAGTTTAAGGACGAGCACCCCTTCGAGAAGCGCAAGGCAGA
GGCCGAGCGTATCCGTCAGAAATATGCCGATCGCATTCCAGTACGTCTAT
CCTTTGTTTTATTTTCTACTGTGATCTTGATTTCACGGTCTTTTGGGGGA
AGGAACGGGTCTCTAGCTCACCGCTTGTTCGAGTCGCTAACCCGGCTCCT
ATCCTACAGGTAATCTGCGAAAAGGTCGAGAAATCGGACATCGCTACCAT
CGACAAGAAGAAATATCTTGTCCCTGCCGACCTTACCGTTGGGCAGTTCG
TCTACGTGATCCGTAAGCGGATTAAGCTGTCCCCCGAGAAGGCGATCTTT
ATCTTTGTCGACGAGGTTTTGCCGCCTACGGCCGCTCTCATGAGCAGTAT
CTACGAAGAGCACAAGGATGAAGATGGCTTCTTGTATATCACGTATGCCG
ATCCCTCTGATTTCCTACTACCACTGTTCTGTGTGCATAGTGCTAACTCG
GATCTTCTCTTTATCAGGTACTCCGGCGAGAATACGTTTGGTGACTGCTA
G
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Coding sequence (CDS) from alignment at NKJJ01000004.1:2358499..2359049-

>CAN33_3695-T1 ID=CAN33_3695-T1|Name=CAN33_3695-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1071bp|location=Sequence derived from alignment at NKJJ01000004.1:2358499..2359049- (Aspergillus niger FDAARGOS_311)
GTACTCCGGCGAGAATACGTTTGGTGACTGCTAGGTAATCTGCGAAAAGG
TCGAGAAATCGGACATCGCTACCATCGACAAGAAGAAATATCTTGTCCCT
GCCGACCTTACCGTTGGGCAGTTCGTCTACGTGATCCGTAAGCGGATTAA
GCTGTCCCCCGAGAAGGCGATCTTTATCTTTGTCGACGAGGTTTTGCCGC
CTACGGCCGCTCTCATGAGCAGTATCTACGAAGAGCACAAGGATGAAGAT
GGCTTCTTGTATATCACATGCGTTCCAAGTTTAAGGACGAGCACCCCTTC
GAGAAGCGCAAGGCAGAGGCCGAGCGTATCCGTCAGAAATATGCCGATCG
CATTCCAGTACTCCGGCGAGAATACGTTTGGTGACTGCTAGGTAATCTGC
GAAAAGGTCGAGAAATCGGACATCGCTACCATCGACAAGAAGAAATATCT
TGTCCCTGCCGACCTTACCGTTGGGCAGTTCGTCTACGTGATCCGTAAGC
GGATTAAGCTGTCCCCCGAGAAGGCGATCTTTATCTTTGTCGACGAGGTT
TTGCCGCCTACGGCCGCTCTCATGAGCAGTATCTACGAAGAGCACAAGGA
TGAAGATGGCTTCTTGTATATCACATGCGTTCCAAGTTTAAGGACGAGCA
CCCCTTCGAGAAGCGCAAGGCAGAGGCCGAGCGTATCCGTCAGAAATATG
CCGATCGCATTCCAGTACTCCGGCGAGAATACGTTTGGTGACTGCTAGGT
AATCTGCGAAAAGGTCGAGAAATCGGACATCGCTACCATCGACAAGAAGA
AATATCTTGTCCCTGCCGACCTTACCGTTGGGCAGTTCGTCTACGTGATC
CGTAAGCGGATTAAGCTGTCCCCCGAGAAGGCGATCTTTATCTTTGTCGA
CGAGGTTTTGCCGCCTACGGCCGCTCTCATGAGCAGTATCTACGAAGAGC
ACAAGGATGAAGATGGCTTCTTGTATATCACATGCGTTCCAAGTTTAAGG
ACGAGCACCCCTTCGAGAAGCGCAAGGCAGAGGCCGAGCGTATCCGTCAG
AAATATGCCGATCGCATTCCA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ATG8CAN33_3695Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_3695-T1CAN33_3695-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_3695-T1.cdsCAN33_3695-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_3695-T1.exon3CAN33_3695-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_3695-T1.exon2CAN33_3695-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_3695-T1.exon1CAN33_3695-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteBUSCO:EOG09265BTA
DBxrefInterPro:IPR029071
DBxrefInterPro:IPR004241
DBxrefPFAM:PF02991
DBxrefPFAM:PF04110
Productubiquitin-like protein atg8
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000004.1supercontigNKJJ01000004.1:2358499..2359049 -
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