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CAN33_37000-T1, CAN33_37000-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_37000-T1
Unique NameCAN33_37000-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000017.1:585317..587662-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_37000-T1 ID=CAN33_37000-T1|Name=CAN33_37000-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=2346bp|location=Sequence derived from alignment at NKJJ01000017.1:585317..587662- (Aspergillus niger FDAARGOS_311)
ATGGAGCCGACAACCGCTCAGGAACAGCTGCCCGCTCCAGAGGCTAATGC
GCCCAAGCGTGATCCGGAGAATGGCGATGCCGCTGCAGACCACCAGGCCC
AGGAGCCACCCTCGAAGAAAGCCAGACTCGATGATTCGGCGGATTCTAAC
GGACAGACGGCTGATGCGCCCGCCCCGCGTATGAAGGGCGTTGCTCCTAT
CAAGCCCGAGTATGTGATTGATCTAAATCTGTTTGCGATGCGCCCGCTCT
AACCGACTTCCTCTGCTAGGTTTATTATCGACCAACAACCCACGAGAGGC
CAGACCGCTTCCGATGCCAATGCTGACGATGCTGCGGAAGCTGCACACCA
CGACGGGCGCGCCGATGAGCAGAATGGAAAGAAGAAAAAGAAGAAGACTG
GTCAGAATACGAACCGCACGTTTGGTCGATCCGAGGATGCGAAAGGATTG
TGCTCTAGTGTCAACTTCAGGCCTGAATTTTCTCCTGCCGAGTGCACTTT
CGGTGAAAAGTGTCGGTACGAGCATGACCTGCGCACATACTTGAAGGAGC
ATAAGCGGGAAGATCTTACGACGTTCAATGGCATGTGTCCTGTCTGGGAT
GTCCACGGAAAGTGCTTCGTGGGCTGGAAATGTCGTTTTGTCGGTTCACA
CTCGGAGGAGCGAGAGACTGCCGATGGAAGGAAAGAGTTGGTTCTTATTG
AGGATGAGGAGCGCAAGAAGAAGGTTCAGCGGCTTGTTCCCTTTGCTGGA
GAGGATGGGGCTGTGAATGTTGCTTCGATGGAGGATAAGATTGCCTTGGC
GAGGAGGAAGATGGACTTCCCAAGAGCTGGGCCGTATAGTGCTTGGCTGG
AAAACACATCCAGGACCATTGAGAAGGAGCTCCACAAACGGCATCGTGCT
GCGCCCGTAGGAGCTGAAACCAAGGATGGAGAGTCTAAGGATGCAGAATC
TAAGGATGCAGATAGCAAGGACGAAAAGGAGGAGAACCGGGCTATGTACG
TTGAGCCGCCATTCATGCCATCAGAGAAGCGCCGACTGTACTTTGGACCC
GAAACACCGGCACTGGCGCCTTTGACTACCCAAGGCAATATGCCTTTCCG
AAGACTTTGCGTCGAGCTTGGCGCACAATTTACCTATTCTGAGATGGCCA
TGAGCTTGCCCTTGATCCAGGGTAACAAGTCGGAGTGGGCCTTAATGCGA
GCCCATGAGTCGGAGATGCTCCCTCCCACGATGCTGCCCGGGGCAGACAT
CGTGCAGGGCTATGACAACTCCAAGGACATGAAGTTTGGTGCTCAGATTG
CAGCAAACAAGCCCTGGCAGGCGTTCAAGGCTACAGAGGCGCTGGCTAAA
GTTACTCCAAACCTGCGTGTCATCGATCTGAACTGTGGCTGCCCGATTGA
CCTCGTCTTCAAGGATGGTGCTGGCTCTGCTCTTCTGGAGCACCCGTCGA
AGCTCGAGAAGATCATTCGTGGCATGAACACTGTTTCGGATCAGATTCCT
ATCACGGTCAAGATCCGTATGGGAACGAAGGACAACAATCCGAACGCCTT
GAAACTGACGGAGCGTTTGCTGCTTGGGGGCTACGAAACCAGTCTGCTTC
ATCACGACGGCGCCGCAGGTGCAGCGGCTATCACTCTTCACGGCCGTAGC
AGACAGCAGCGTTACACCAGACAAGCTGATTGGGAATACATCTCCGAATG
TGCCGCCTTGATCAAGCGCCTGAACGAGAAGACTGACGCGGTGACGGATA
CCATCCGGGAGCCTGACGCCCGGACGCAGCCAAACGGCGGGAAGGTTTAC
TTCCTGGGTAACGGTGACTGCTATTCTCATGTTGACTACGATAACCACAT
CAACAATGCTGGCGTTGATGCTGTTATGCTTGGTCGCGGTCCTCTGATCA
AGCCTTGGCTGTTCGAGGAAATTCAGGCGGGCCAGTACCTTGACAAGTCT
GCTACGGAACGTTTGGCAATGATTGAGAAGTTCTGTAAGTATGGTCTGGA
GGCATGGGGATCCGATGAGCACGGTGTTGGTACGACTAGACGCTTCTTGA
TGGAATGGCTGAGCTTCACTCGTCGCTATGTACCTATCGGGTTGCTCGAG
CATCTTCCCCCCTACATCAACGACCGGCCCCCGGCTTTCAGAGGCCGGAA
TGAGCTTGAGACACTGCTGGCCAGTGCCAACTACAAGGATTGGCTCAAGA
TCTCGTAAGTACCTTCTCCTGACCGGCTCACTCTTTCGAACTCATTCTAA
CAGCCTTCTAGGGAGATGTTCCTCGGACCGGCTCATAAGGACTTCAAGTT
CGAGCCCAAGCACAAGTCCAACTCGTATGACGAAGCGGAGGGTTAA
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Coding sequence (CDS) from alignment at NKJJ01000017.1:585317..587662-

>CAN33_37000-T1 ID=CAN33_37000-T1|Name=CAN33_37000-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=6120bp|location=Sequence derived from alignment at NKJJ01000017.1:585317..587662- (Aspergillus niger FDAARGOS_311)
GGAGATGTTCCTCGGACCGGCTCATAAGGACTTCAAGTTCGAGCCCAAGC
ACAAGTCCAACTCGTATGACGAAGCGGAGGGTTAATGTCAACTTCAGGCC
TGAATTTTCTCCTGCCGAGTGCACTTTCGGTGAAAAGTGTCGGTACGAGC
ATGACCTGCGCACATACTTGAAGGAGCATAAGCGGGAAGATCTTACGACG
TTCAATGGCATGTGTCCTGTCTGGGATGTCCACGGAAAGTGCTTCGTGGG
CTGGAAATGTCGTTTTGTCGGTTCACACTCGGAGGAGCGAGAGACTGCCG
ATGGAAGGAAAGAGTTGGTTCTTATTGAGGATGAGGAGCGCAAGAAGAAG
GTTCAGCGGCTTGTTCCCTTTGCTGGAGAGGATGGGGCTGTGAATGTTGC
TTCGATGGAGGATAAGATTGCCTTGGCGAGGAGGAAGATGGACTTCCCAA
GAGCTGGGCCGTATAGTGCTTGGCTGGAAAACACATCCAGGACCATTGAG
AAGGAGCTCCACAAACGGCATCGTGCTGCGCCCGTAGGAGCTGAAACCAA
GGATGGAGAGTCTAAGGATGCAGAATCTAAGGATGCAGATAGCAAGGACG
AAAAGGAGGAGAACCGGGCTATGTACGTTGAGCCGCCATTCATGCCATCA
GAGAAGCGCCGACTGTACTTTGGACCCGAAACACCGGCACTGGCGCCTTT
GACTACCCAAGGCAATATGCCTTTCCGAAGACTTTGCGTCGAGCTTGGCG
CACAATTTACCTATTCTGAGATGGCCATGAGCTTGCCCTTGATCCAGGGT
AACAAGTCGGAGTGGGCCTTAATGCGAGCCCATGAGTCGGAGATGCTCCC
TCCCACGATGCTGCCCGGGGCAGACATCGTGCAGGGCTATGACAACTCCA
AGGACATGAAGTTTGGTGCTCAGATTGCAGCAAACAAGCCCTGGCAGGCG
TTCAAGGCTACAGAGGCGCTGGCTAAAGTTACTCCAAACCTGCGTGTCAT
CGATCTGAACTGTGGCTGCCCGATTGACCTCGTCTTCAAGGATGGTGCTG
GCTCTGCTCTTCTGGAGCACCCGTCGAAGCTCGAGAAGATCATTCGTGGC
ATGAACACTGTTTCGGATCAGATTCCTATCACGGTCAAGATCCGTATGGG
AACGAAGGACAACAATCCGAACGCCTTGAAACTGACGGAGCGTTTGCTGC
TTGGGGGCTACGAAACCAGTCTGCTTCATCACGACGGCGCCGCAGGTGCA
GCGGCTATCACTCTTCACGGCCGTAGCAGACAGCAGCGTTACACCAGACA
AGCTGATTGGGAATACATCTCCGAATGTGCCGCCTTGATCAAGCGCCTGA
ACGAGAAGACTGACGCGGTGACGGATACCATCCGGGAGCCTGACGCCCGG
ACGCAGCCAAACGGCGGGAAGGTTTACTTCCTGGGTAACGGTGACTGCTA
TTCTCATGTTGACTACGATAACCACATCAACAATGCTGGCGTTGATGCTG
TTATGCTTGGTCGCGGTCCTCTGATCAAGCCTTGGCTGTTCGAGGAAATT
CAGGCGGGCCAGTACCTTGACAAGTCTGCTACGGAACGTTTGGCAATGAT
TGAGAAGTTCTGTAAGTATGGTCTGGAGGCATGGGGATCCGATGAGCACG
GTGTTGGTACGACTAGACGCTTCTTGATGGAATGGCTGAGCTTCACTCGT
CGCTATGTACCTATCGGGTTGCTCGAGCATCTTCCCCCCTACATCAACGA
CCGGCCCCCGGCTTTCAGAGGCCGGAATGAGCTTGAGACACTGCTGGCCA
GTGCCAACTACAAGGATTGGCTCAAGATCTCATGGAGCCGACAACCGCTC
AGGAACAGCTGCCCGCTCCAGAGGCTAATGCGCCCAAGCGTGATCCGGAG
AATGGCGATGCCGCTGCAGACCACCAGGCCCAGGAGCCACCCTCGAAGAA
AGCCAGACTCGATGATTCGGCGGATTCTAACGGACAGACGGCTGATGCGC
CCGCCCCGCGTATGAAGGGCGTTGCTCCTATCAAGCCCGAGGAGATGTTC
CTCGGACCGGCTCATAAGGACTTCAAGTTCGAGCCCAAGCACAAGTCCAA
CTCGTATGACGAAGCGGAGGGTTAATGTCAACTTCAGGCCTGAATTTTCT
CCTGCCGAGTGCACTTTCGGTGAAAAGTGTCGGTACGAGCATGACCTGCG
CACATACTTGAAGGAGCATAAGCGGGAAGATCTTACGACGTTCAATGGCA
TGTGTCCTGTCTGGGATGTCCACGGAAAGTGCTTCGTGGGCTGGAAATGT
CGTTTTGTCGGTTCACACTCGGAGGAGCGAGAGACTGCCGATGGAAGGAA
AGAGTTGGTTCTTATTGAGGATGAGGAGCGCAAGAAGAAGGTTCAGCGGC
TTGTTCCCTTTGCTGGAGAGGATGGGGCTGTGAATGTTGCTTCGATGGAG
GATAAGATTGCCTTGGCGAGGAGGAAGATGGACTTCCCAAGAGCTGGGCC
GTATAGTGCTTGGCTGGAAAACACATCCAGGACCATTGAGAAGGAGCTCC
ACAAACGGCATCGTGCTGCGCCCGTAGGAGCTGAAACCAAGGATGGAGAG
TCTAAGGATGCAGAATCTAAGGATGCAGATAGCAAGGACGAAAAGGAGGA
GAACCGGGCTATGTACGTTGAGCCGCCATTCATGCCATCAGAGAAGCGCC
GACTGTACTTTGGACCCGAAACACCGGCACTGGCGCCTTTGACTACCCAA
GGCAATATGCCTTTCCGAAGACTTTGCGTCGAGCTTGGCGCACAATTTAC
CTATTCTGAGATGGCCATGAGCTTGCCCTTGATCCAGGGTAACAAGTCGG
AGTGGGCCTTAATGCGAGCCCATGAGTCGGAGATGCTCCCTCCCACGATG
CTGCCCGGGGCAGACATCGTGCAGGGCTATGACAACTCCAAGGACATGAA
GTTTGGTGCTCAGATTGCAGCAAACAAGCCCTGGCAGGCGTTCAAGGCTA
CAGAGGCGCTGGCTAAAGTTACTCCAAACCTGCGTGTCATCGATCTGAAC
TGTGGCTGCCCGATTGACCTCGTCTTCAAGGATGGTGCTGGCTCTGCTCT
TCTGGAGCACCCGTCGAAGCTCGAGAAGATCATTCGTGGCATGAACACTG
TTTCGGATCAGATTCCTATCACGGTCAAGATCCGTATGGGAACGAAGGAC
AACAATCCGAACGCCTTGAAACTGACGGAGCGTTTGCTGCTTGGGGGCTA
CGAAACCAGTCTGCTTCATCACGACGGCGCCGCAGGTGCAGCGGCTATCA
CTCTTCACGGCCGTAGCAGACAGCAGCGTTACACCAGACAAGCTGATTGG
GAATACATCTCCGAATGTGCCGCCTTGATCAAGCGCCTGAACGAGAAGAC
TGACGCGGTGACGGATACCATCCGGGAGCCTGACGCCCGGACGCAGCCAA
ACGGCGGGAAGGTTTACTTCCTGGGTAACGGTGACTGCTATTCTCATGTT
GACTACGATAACCACATCAACAATGCTGGCGTTGATGCTGTTATGCTTGG
TCGCGGTCCTCTGATCAAGCCTTGGCTGTTCGAGGAAATTCAGGCGGGCC
AGTACCTTGACAAGTCTGCTACGGAACGTTTGGCAATGATTGAGAAGTTC
TGTAAGTATGGTCTGGAGGCATGGGGATCCGATGAGCACGGTGTTGGTAC
GACTAGACGCTTCTTGATGGAATGGCTGAGCTTCACTCGTCGCTATGTAC
CTATCGGGTTGCTCGAGCATCTTCCCCCCTACATCAACGACCGGCCCCCG
GCTTTCAGAGGCCGGAATGAGCTTGAGACACTGCTGGCCAGTGCCAACTA
CAAGGATTGGCTCAAGATCTCATGGAGCCGACAACCGCTCAGGAACAGCT
GCCCGCTCCAGAGGCTAATGCGCCCAAGCGTGATCCGGAGAATGGCGATG
CCGCTGCAGACCACCAGGCCCAGGAGCCACCCTCGAAGAAAGCCAGACTC
GATGATTCGGCGGATTCTAACGGACAGACGGCTGATGCGCCCGCCCCGCG
TATGAAGGGCGTTGCTCCTATCAAGCCCGAGGAGATGTTCCTCGGACCGG
CTCATAAGGACTTCAAGTTCGAGCCCAAGCACAAGTCCAACTCGTATGAC
GAAGCGGAGGGTTAATGTCAACTTCAGGCCTGAATTTTCTCCTGCCGAGT
GCACTTTCGGTGAAAAGTGTCGGTACGAGCATGACCTGCGCACATACTTG
AAGGAGCATAAGCGGGAAGATCTTACGACGTTCAATGGCATGTGTCCTGT
CTGGGATGTCCACGGAAAGTGCTTCGTGGGCTGGAAATGTCGTTTTGTCG
GTTCACACTCGGAGGAGCGAGAGACTGCCGATGGAAGGAAAGAGTTGGTT
CTTATTGAGGATGAGGAGCGCAAGAAGAAGGTTCAGCGGCTTGTTCCCTT
TGCTGGAGAGGATGGGGCTGTGAATGTTGCTTCGATGGAGGATAAGATTG
CCTTGGCGAGGAGGAAGATGGACTTCCCAAGAGCTGGGCCGTATAGTGCT
TGGCTGGAAAACACATCCAGGACCATTGAGAAGGAGCTCCACAAACGGCA
TCGTGCTGCGCCCGTAGGAGCTGAAACCAAGGATGGAGAGTCTAAGGATG
CAGAATCTAAGGATGCAGATAGCAAGGACGAAAAGGAGGAGAACCGGGCT
ATGTACGTTGAGCCGCCATTCATGCCATCAGAGAAGCGCCGACTGTACTT
TGGACCCGAAACACCGGCACTGGCGCCTTTGACTACCCAAGGCAATATGC
CTTTCCGAAGACTTTGCGTCGAGCTTGGCGCACAATTTACCTATTCTGAG
ATGGCCATGAGCTTGCCCTTGATCCAGGGTAACAAGTCGGAGTGGGCCTT
AATGCGAGCCCATGAGTCGGAGATGCTCCCTCCCACGATGCTGCCCGGGG
CAGACATCGTGCAGGGCTATGACAACTCCAAGGACATGAAGTTTGGTGCT
CAGATTGCAGCAAACAAGCCCTGGCAGGCGTTCAAGGCTACAGAGGCGCT
GGCTAAAGTTACTCCAAACCTGCGTGTCATCGATCTGAACTGTGGCTGCC
CGATTGACCTCGTCTTCAAGGATGGTGCTGGCTCTGCTCTTCTGGAGCAC
CCGTCGAAGCTCGAGAAGATCATTCGTGGCATGAACACTGTTTCGGATCA
GATTCCTATCACGGTCAAGATCCGTATGGGAACGAAGGACAACAATCCGA
ACGCCTTGAAACTGACGGAGCGTTTGCTGCTTGGGGGCTACGAAACCAGT
CTGCTTCATCACGACGGCGCCGCAGGTGCAGCGGCTATCACTCTTCACGG
CCGTAGCAGACAGCAGCGTTACACCAGACAAGCTGATTGGGAATACATCT
CCGAATGTGCCGCCTTGATCAAGCGCCTGAACGAGAAGACTGACGCGGTG
ACGGATACCATCCGGGAGCCTGACGCCCGGACGCAGCCAAACGGCGGGAA
GGTTTACTTCCTGGGTAACGGTGACTGCTATTCTCATGTTGACTACGATA
ACCACATCAACAATGCTGGCGTTGATGCTGTTATGCTTGGTCGCGGTCCT
CTGATCAAGCCTTGGCTGTTCGAGGAAATTCAGGCGGGCCAGTACCTTGA
CAAGTCTGCTACGGAACGTTTGGCAATGATTGAGAAGTTCTGTAAGTATG
GTCTGGAGGCATGGGGATCCGATGAGCACGGTGTTGGTACGACTAGACGC
TTCTTGATGGAATGGCTGAGCTTCACTCGTCGCTATGTACCTATCGGGTT
GCTCGAGCATCTTCCCCCCTACATCAACGACCGGCCCCCGGCTTTCAGAG
GCCGGAATGAGCTTGAGACACTGCTGGCCAGTGCCAACTACAAGGATTGG
CTCAAGATCTCATGGAGCCGACAACCGCTCAGGAACAGCTGCCCGCTCCA
GAGGCTAATGCGCCCAAGCGTGATCCGGAGAATGGCGATGCCGCTGCAGA
CCACCAGGCCCAGGAGCCACCCTCGAAGAAAGCCAGACTCGATGATTCGG
CGGATTCTAACGGACAGACGGCTGATGCGCCCGCCCCGCGTATGAAGGGC
GTTGCTCCTATCAAGCCCGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0050660flavin adenine dinucleotide binding
GO:0017150tRNA dihydrouridine synthase activity
Vocabulary: Biological Process
TermDefinition
GO:0008033tRNA processing
GO:0055114oxidation-reduction process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
DUS3CAN33_37000Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_37000-T1CAN33_37000-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_37000-T1.cdsCAN33_37000-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_37000-T1.exon3CAN33_37000-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_37000-T1.exon2CAN33_37000-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_37000-T1.exon1CAN33_37000-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteBUSCO:EOG09261ZPW
DBxrefInterPro:IPR035587
DBxrefInterPro:IPR018517
DBxrefInterPro:IPR013785
DBxrefInterPro:IPR001269
DBxrefPFAM:PF01207
ProducttRNA-dihydrouridine synthase 3
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000017.1supercontigNKJJ01000017.1:585317..587662 -
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