You are here

Home

CAN33_37005-T1, CAN33_37005-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_37005-T1
Unique NameCAN33_37005-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000017.1:592400..594259+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_37005-T1 ID=CAN33_37005-T1|Name=CAN33_37005-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1860bp|location=Sequence derived from alignment at NKJJ01000017.1:592400..594259+ (Aspergillus niger FDAARGOS_311)
ATGACCGGTGCAGCCGCTCCGATCGACATTGCCACCCGCCAGAGTTCCGT
TTCTCCTCCCGGACAGCAGGCGTCGAATCTGACGTCTGCTCTGCAGAGAG
CTGGTAATGGAGAACGGACAGGCAGTCTATCCCATGCAAATGGTGTTGGT
CTCAGCGTCTTCAAGGCCCCGCCTCCTCGCAAGGACTCTATCGGTGCAGC
TACTGCACAATGGGGCAACGGAACGAAGCCCATCTCAATGTCCGGCTCCA
ACCGCGATAAAGGCCGCCGTGAGTCTTTGGCAGGAAGTTTAGTTGGTGGA
ATGAGCTGGGGTGGTGTGTCTGTTGGCAGTTGGATTCGCGATGAGTGAGT
GTCCTTTGTCCTTATGGGAATCATTTCGGTTTCCCCTGATCGCGCAAGTG
CTTTGGCCACTGGAAGCTGACGATGAATCATCTAGCATAATCATGACCGG
CACATCTCCGTTCACTTTCCAGTCACCGTCATTTCATTCATCCTCATATT
TACCCAAGCTGGAGGCAAACTTCATGCGCGACTTCAATTGTTGTGGGGTG
ACCCTTCCGACGCTTCACGATCTTTTGCAGCACTATGAAGAAGCTCACGC
CACCAAGTCACCTCAGCAGGGCCACCGCCCCAGTCAAGGCGACAGTAGAG
CGGCCCTGGCTGCGGTGGCGATGGCGCAGCAGCAACAGGGTCAGCAAAAC
AATAATCAAGGCCGTGGATTGCAACCAGATAGGACTCTGGACTTGCAGCG
GAAACTGAGTCAGGTCCCTCACACTCAGCAGCATTCGGATATGGATACCA
TTGATGACATGGAACTCGATGAGCCGATGGGTGACCACGATGCCGCCACT
GCACAGCTGTTCGCGCCTCAGTCGCGTGATGGAGGCCAAGGAGGTTTTGG
CAGTGCCAACCAAAGGGTTCCGCATCTGAATCTATCTATGCTTCCAGGAC
ACCAAGGGTTCAAAGGCTCTCAGCCCGGTACTCCCGTTGCTTCTGGGCGC
CCTCTATCGCTGCAGAACAACCCAACAGTTTCTTCCGTCAATACTCCTAC
TTTGATGGCGAACCCTCTACAGAACTCACAGTTCCGGACCACACCAGACT
CGTCTGCACCTGGGACGCCGGCAGAACTCGATGACAGCATGCTTGGTGGC
TTCGGAGATCTGGCTATGCAAAACCCAATGATGCAGGGCCAGTCTCAGTT
TGGAAGGTTCGCTGGGAACAACAACGATATGGTAGACTTGTGTATCGACG
AACCAGCCAAACGGTTGTTTAGCCCCACCGGCGGAATTAACACTCCCAAC
GCTCACTTCAAGCTAAGTGGAGCACAGTATGGTCCCAACAGTGAGATCGC
TCGACGCATCCGAGAGCAACAGTTGTTGGCAGGTGTTCCTGATACCACTG
CTCTCCTTCCCAACGAGGAACCTAAGCCTTTCCGGTGCCCAGTCATTGGC
TGCGAGAAGGCGTATAAGAACCAGAATGGTCTGAAATACCACAAAGCTGT
AAGTCTTTCGAACCAAACCACTTAGCTTTTCTAACTGTTTCCTAGCACGG
CCACAATAACCAGCAGCTTCATGACAACGCAGACGGCACCTTTTCCATCG
TCAATCCCGAGACCTCAACTCCATATCCTGGAACACTTGGTATGGAGAAG
GAGAAGCCCTACCGCTGCGAGGTCTGTGGCAAGCGTTATAAGAACCTGAA
TGGTCTTAAATATCACAAGTCGCACTCGCCGCCATGCAATCCTGACTTCC
AGCTTGCTGCAGGCAGGAACTTGGCTTTTGGTGGAGGCGTCATGCAAGGG
CAGAACATCAACGTTGCTGGGGCTGGCCTACCTGGCATCGGTGAAGAGGG
TCTTTTATAA
back to top

Coding sequence (CDS) from alignment at NKJJ01000017.1:592400..594259+

>CAN33_37005-T1 ID=CAN33_37005-T1|Name=CAN33_37005-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=5166bp|location=Sequence derived from alignment at NKJJ01000017.1:592400..594259+ (Aspergillus niger FDAARGOS_311)
ATGACCGGTGCAGCCGCTCCGATCGACATTGCCACCCGCCAGAGTTCCGT
TTCTCCTCCCGGACAGCAGGCGTCGAATCTGACGTCTGCTCTGCAGAGAG
CTGGTAATGGAGAACGGACAGGCAGTCTATCCCATGCAAATGGTGTTGGT
CTCAGCGTCTTCAAGGCCCCGCCTCCTCGCAAGGACTCTATCGGTGCAGC
TACTGCACAATGGGGCAACGGAACGAAGCCCATCTCAATGTCCGGCTCCA
ACCGCGATAAAGGCCGCCGTGAGTCTTTGGCAGGAAGTTTAGTTGGTGGA
ATGAGCTGGGGTGGTGTGTCTGTTGGCAGTTGGATTCGCGATGACATAAT
CATGACCGGCACATCTCCGTTCACTTTCCAGTCACCGTCATTTCATTCAT
CCTCATATTTACCCAAGCTGGAGGCAAACTTCATGCGCGACTTCAATTGT
TGTGGGGTGACCCTTCCGACGCTTCACGATCTTTTGCAGCACTATGAAGA
AGCTCACGCCACCAAGTCACCTCAGCAGGGCCACCGCCCCAGTCAAGGCG
ACAGTAGAGCGGCCCTGGCTGCGGTGGCGATGGCGCAGCAGCAACAGGGT
CAGCAAAACAATAATCAAGGCCGTGGATTGCAACCAGATAGGACTCTGGA
CTTGCAGCGGAAACTGAGTCAGGTCCCTCACACTCAGCAGCATTCGGATA
TGGATACCATTGATGACATGGAACTCGATGAGCCGATGGGTGACCACGAT
GCCGCCACTGCACAGCTGTTCGCGCCTCAGTCGCGTGATGGAGGCCAAGG
AGGTTTTGGCAGTGCCAACCAAAGGGTTCCGCATCTGAATCTATCTATGC
TTCCAGGACACCAAGGGTTCAAAGGCTCTCAGCCCGGTACTCCCGTTGCT
TCTGGGCGCCCTCTATCGCTGCAGAACAACCCAACAGTTTCTTCCGTCAA
TACTCCTACTTTGATGGCGAACCCTCTACAGAACTCACAGTTCCGGACCA
CACCAGACTCGTCTGCACCTGGGACGCCGGCAGAACTCGATGACAGCATG
CTTGGTGGCTTCGGAGATCTGGCTATGCAAAACCCAATGATGCAGGGCCA
GTCTCAGTTTGGAAGGTTCGCTGGGAACAACAACGATATGGTAGACTTGT
GTATCGACGAACCAGCCAAACGGTTGTTTAGCCCCACCGGCGGAATTAAC
ACTCCCAACGCTCACTTCAAGCTAAGTGGAGCACAGTATGGTCCCAACAG
TGAGATCGCTCGACGCATCCGAGAGCAACAGTTGTTGGCAGGTGTTCCTG
ATACCACTGCTCTCCTTCCCAACGAGGAACCTAAGCCTTTCCGGTGCCCA
GTCATTGGCTGCGAGAAGGCGTATAAGAACCAGAATGGTCTGAAATACCA
CAAAGCTCACGGCCACAATAACCAGCAGCTTCATGACAACGCAGACGGCA
CCTTTTCCATCGTCAATCCCGAGACCTCAACTCCATATCCTGGAACACTT
GGTATGGAGAAGGAGAAGCCCTACCGCTGCGAGGTCTGTGGCAAGCGTTA
TAAGAACCTGAATGGTCTTAAATATCACAAGTCGCACTCGCCGCCATGCA
ATCCTGACTTCCAGCTTGCTGCAGGCAGGAACTTGGCTTTTGGTGGAGGC
GTCATGCAAGGGCAGAACATCAACGTTGCTGGGGCTGGCCTACCTGGCAT
CGGTGAAGAGGGTCTTTTATAAATGACCGGTGCAGCCGCTCCGATCGACA
TTGCCACCCGCCAGAGTTCCGTTTCTCCTCCCGGACAGCAGGCGTCGAAT
CTGACGTCTGCTCTGCAGAGAGCTGGTAATGGAGAACGGACAGGCAGTCT
ATCCCATGCAAATGGTGTTGGTCTCAGCGTCTTCAAGGCCCCGCCTCCTC
GCAAGGACTCTATCGGTGCAGCTACTGCACAATGGGGCAACGGAACGAAG
CCCATCTCAATGTCCGGCTCCAACCGCGATAAAGGCCGCCGTGAGTCTTT
GGCAGGAAGTTTAGTTGGTGGAATGAGCTGGGGTGGTGTGTCTGTTGGCA
GTTGGATTCGCGATGACATAATCATGACCGGCACATCTCCGTTCACTTTC
CAGTCACCGTCATTTCATTCATCCTCATATTTACCCAAGCTGGAGGCAAA
CTTCATGCGCGACTTCAATTGTTGTGGGGTGACCCTTCCGACGCTTCACG
ATCTTTTGCAGCACTATGAAGAAGCTCACGCCACCAAGTCACCTCAGCAG
GGCCACCGCCCCAGTCAAGGCGACAGTAGAGCGGCCCTGGCTGCGGTGGC
GATGGCGCAGCAGCAACAGGGTCAGCAAAACAATAATCAAGGCCGTGGAT
TGCAACCAGATAGGACTCTGGACTTGCAGCGGAAACTGAGTCAGGTCCCT
CACACTCAGCAGCATTCGGATATGGATACCATTGATGACATGGAACTCGA
TGAGCCGATGGGTGACCACGATGCCGCCACTGCACAGCTGTTCGCGCCTC
AGTCGCGTGATGGAGGCCAAGGAGGTTTTGGCAGTGCCAACCAAAGGGTT
CCGCATCTGAATCTATCTATGCTTCCAGGACACCAAGGGTTCAAAGGCTC
TCAGCCCGGTACTCCCGTTGCTTCTGGGCGCCCTCTATCGCTGCAGAACA
ACCCAACAGTTTCTTCCGTCAATACTCCTACTTTGATGGCGAACCCTCTA
CAGAACTCACAGTTCCGGACCACACCAGACTCGTCTGCACCTGGGACGCC
GGCAGAACTCGATGACAGCATGCTTGGTGGCTTCGGAGATCTGGCTATGC
AAAACCCAATGATGCAGGGCCAGTCTCAGTTTGGAAGGTTCGCTGGGAAC
AACAACGATATGGTAGACTTGTGTATCGACGAACCAGCCAAACGGTTGTT
TAGCCCCACCGGCGGAATTAACACTCCCAACGCTCACTTCAAGCTAAGTG
GAGCACAGTATGGTCCCAACAGTGAGATCGCTCGACGCATCCGAGAGCAA
CAGTTGTTGGCAGGTGTTCCTGATACCACTGCTCTCCTTCCCAACGAGGA
ACCTAAGCCTTTCCGGTGCCCAGTCATTGGCTGCGAGAAGGCGTATAAGA
ACCAGAATGGTCTGAAATACCACAAAGCTCACGGCCACAATAACCAGCAG
CTTCATGACAACGCAGACGGCACCTTTTCCATCGTCAATCCCGAGACCTC
AACTCCATATCCTGGAACACTTGGTATGGAGAAGGAGAAGCCCTACCGCT
GCGAGGTCTGTGGCAAGCGTTATAAGAACCTGAATGGTCTTAAATATCAC
AAGTCGCACTCGCCGCCATGCAATCCTGACTTCCAGCTTGCTGCAGGCAG
GAACTTGGCTTTTGGTGGAGGCGTCATGCAAGGGCAGAACATCAACGTTG
CTGGGGCTGGCCTACCTGGCATCGGTGAAGAGGGTCTTTTATAAATGACC
GGTGCAGCCGCTCCGATCGACATTGCCACCCGCCAGAGTTCCGTTTCTCC
TCCCGGACAGCAGGCGTCGAATCTGACGTCTGCTCTGCAGAGAGCTGGTA
ATGGAGAACGGACAGGCAGTCTATCCCATGCAAATGGTGTTGGTCTCAGC
GTCTTCAAGGCCCCGCCTCCTCGCAAGGACTCTATCGGTGCAGCTACTGC
ACAATGGGGCAACGGAACGAAGCCCATCTCAATGTCCGGCTCCAACCGCG
ATAAAGGCCGCCGTGAGTCTTTGGCAGGAAGTTTAGTTGGTGGAATGAGC
TGGGGTGGTGTGTCTGTTGGCAGTTGGATTCGCGATGACATAATCATGAC
CGGCACATCTCCGTTCACTTTCCAGTCACCGTCATTTCATTCATCCTCAT
ATTTACCCAAGCTGGAGGCAAACTTCATGCGCGACTTCAATTGTTGTGGG
GTGACCCTTCCGACGCTTCACGATCTTTTGCAGCACTATGAAGAAGCTCA
CGCCACCAAGTCACCTCAGCAGGGCCACCGCCCCAGTCAAGGCGACAGTA
GAGCGGCCCTGGCTGCGGTGGCGATGGCGCAGCAGCAACAGGGTCAGCAA
AACAATAATCAAGGCCGTGGATTGCAACCAGATAGGACTCTGGACTTGCA
GCGGAAACTGAGTCAGGTCCCTCACACTCAGCAGCATTCGGATATGGATA
CCATTGATGACATGGAACTCGATGAGCCGATGGGTGACCACGATGCCGCC
ACTGCACAGCTGTTCGCGCCTCAGTCGCGTGATGGAGGCCAAGGAGGTTT
TGGCAGTGCCAACCAAAGGGTTCCGCATCTGAATCTATCTATGCTTCCAG
GACACCAAGGGTTCAAAGGCTCTCAGCCCGGTACTCCCGTTGCTTCTGGG
CGCCCTCTATCGCTGCAGAACAACCCAACAGTTTCTTCCGTCAATACTCC
TACTTTGATGGCGAACCCTCTACAGAACTCACAGTTCCGGACCACACCAG
ACTCGTCTGCACCTGGGACGCCGGCAGAACTCGATGACAGCATGCTTGGT
GGCTTCGGAGATCTGGCTATGCAAAACCCAATGATGCAGGGCCAGTCTCA
GTTTGGAAGGTTCGCTGGGAACAACAACGATATGGTAGACTTGTGTATCG
ACGAACCAGCCAAACGGTTGTTTAGCCCCACCGGCGGAATTAACACTCCC
AACGCTCACTTCAAGCTAAGTGGAGCACAGTATGGTCCCAACAGTGAGAT
CGCTCGACGCATCCGAGAGCAACAGTTGTTGGCAGGTGTTCCTGATACCA
CTGCTCTCCTTCCCAACGAGGAACCTAAGCCTTTCCGGTGCCCAGTCATT
GGCTGCGAGAAGGCGTATAAGAACCAGAATGGTCTGAAATACCACAAAGC
TCACGGCCACAATAACCAGCAGCTTCATGACAACGCAGACGGCACCTTTT
CCATCGTCAATCCCGAGACCTCAACTCCATATCCTGGAACACTTGGTATG
GAGAAGGAGAAGCCCTACCGCTGCGAGGTCTGTGGCAAGCGTTATAAGAA
CCTGAATGGTCTTAAATATCACAAGTCGCACTCGCCGCCATGCAATCCTG
ACTTCCAGCTTGCTGCAGGCAGGAACTTGGCTTTTGGTGGAGGCGTCATG
CAAGGGCAGAACATCAACGTTGCTGGGGCTGGCCTACCTGGCATCGGTGA
AGAGGGTCTTTTATAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_37005CAN33_37005Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_37005-T1.exon1CAN33_37005-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_37005-T1.exon2CAN33_37005-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_37005-T1.exon3CAN33_37005-T1.exon3Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_37005-T1.cdsCAN33_37005-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_37005-T1CAN33_37005-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036236
DBxrefInterPro:IPR013087
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000017.1supercontigNKJJ01000017.1:592400..594259 +
Powered by Drupal