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CAN33_37010-T1, CAN33_37010-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_37010-T1
Unique NameCAN33_37010-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000017.1:596130..597949-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_37010-T1 ID=CAN33_37010-T1|Name=CAN33_37010-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1820bp|location=Sequence derived from alignment at NKJJ01000017.1:596130..597949- (Aspergillus niger FDAARGOS_311)
ATGTCGAACCAGCAGGTGGTGAGTGCATCTTTAAAAACACAAACCTTGCC
AGAGCTAGAGACTTCGATGGGCCTGGACTGTGGCTCAATACTCCCTGCGA
AGTTCTCTATTTCCCCGCTCTAACCCCATCATGATACCATGTGAGATGTT
GGCTTATACCAGTTATCCCTAGGGCACGGTGTTCGATCGTGTCATCCAGG
AGGTCTGTGATGGCTCCCAGGTGGACTTCGAGGAAAGTGGTGTGGACCAG
CAAACACTGTTAGATTTGCGCAAGGTTAGTGCTCCATCAACATCCATCTT
CCTTTGTTGGAGAGATTTCTTTGAGGTCAAAAGAAGTCGATATGCTTGGG
GGTGAGAGCCCCAGGGGAGACGCCCCAAGCGGGGTCCGAGAGGTGCGGGA
AGGGCGGCCGCCTGGGGGCATCGCCTGCTTTTGAGTCTCTTTTATACCGC
GCCGCTTTTACCCGCCCTAGTCGGCCTGCCAAGCCGCTTCAGCATCGTCA
TTCGCTGCCCGTTTCCCCTTCACCTCTCGGTCTCAGATTTCCTTATACTT
ATCGCTTGACCCTTTGGCTCCTTGCTCCATTCATATATTTCTTTTAATTA
AAACCTTTCAGTCTGCTAATATTTCCCCTCCAGAGCTGGCAGAAGAAGCT
CTCCTCATTGGGTGTCGCTCACTTCCCTTGGGATCCGCCGCCGCCGCAAC
CGGCTCCCCCTCAGACGCAAAATATCCTCCCTCCTACAGCAACTGTACCA
TCAAATGCTCCCCGGCCTGGTCCGCCCCCTCAGCCACAGCATCATGTTCC
TCCTCCACCTCTGCAGCAACCCATTCCTCAGTCCGCCCCCGCTACGGCAC
CTCCGCTCCAAGCTCCTACTCCAGTTGGGGCCGGCCCCAATGCCATGGGT
CAACAACAACCTCACATCAAGACCGAACCTGGCGTCAACGGTCAACCGGG
GATGATTCCGATGAATAATATGATGATGCCAAACTCCTCCAACCCTCAGT
CTGCTCAAGAACGGGCTGCCAATATGCTTCGTCAGCGTTACGGCGCAGCA
GCCGCTAACTCGGTCAGTCAGCTGCAAGCACAGTCACAGGCACAAGCAGC
CATGGCCATGCCGGGCCAGCAGCGCCCCCAACCCATGCAGCATGTGCCCA
ACGGACAGGCTCCACAGATCAAGCAAGAACCGGGTTACCCCCCTGTGTCT
CAACCCCCCGTCGGCAATACTCAAACGGACGGTGCCGGTGATGATGCCTT
GTCTGCATGGAAGGCTGAGGTTGCACGGAGGCGGGAAGCTGCTGAACGCC
AGGGAGGAGAAGGCGATCGTCTCCTTCGTGAACATCTCAGACAACGGATG
CTCCAATTAGAAGGCGGTGGTCTGATGTTGCCTCTCGACGAGCATGACTA
CTCATCAAAGACATTGACTCGTGGGCTGGTGGCTACCCAAGCAGAGCCAG
CTGAGGTATCAGAAGTTGCTGGCTCCTCGTTGCATCCGCCCAAGGTTCTC
GGAGCTCAGTTTGACGGTCCCGGTGGTGATGATGAAAGGGATGAGGATGA
TGAAGATGCTATCAACTCGGACCTTGACGACCCTGATGACCTTGTTGCTG
AGGATCATGATGCTGAAGATGCCGTAGGCCAGGTCATGCTTTGCACTTAC
GACAAGGTACAACGCGTGAAGAACAAGTGGAAGTGCACACTTAAAGATGG
TATTTTGACCACCGGTGGCAAGGAGTAAGTGCCCTCTTTTCATTAACCCC
ATATCCAATCTCCCGCTAACGAGTTGACAGGTACGTCTTCCACAAAGGTC
AAGGAGAGTTCGAGTGGTAA
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Coding sequence (CDS) from alignment at NKJJ01000017.1:596130..597949-

>CAN33_37010-T1 ID=CAN33_37010-T1|Name=CAN33_37010-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=5700bp|location=Sequence derived from alignment at NKJJ01000017.1:596130..597949- (Aspergillus niger FDAARGOS_311)
GTACGTCTTCCACAAAGGTCAAGGAGAGTTCGAGTGGTAAGCCAGGTCAT
GCTTTGCACTTACGACAAGGTACAACGCGTGAAGAACAAGTGGAAGTGCA
CACTTAAAGATGGTATTTTGACCACCGGTGGCAAGGAAGCTGGCAGAAGA
AGCTCTCCTCATTGGGTGTCGCTCACTTCCCTTGGGATCCGCCGCCGCCG
CAACCGGCTCCCCCTCAGACGCAAAATATCCTCCCTCCTACAGCAACTGT
ACCATCAAATGCTCCCCGGCCTGGTCCGCCCCCTCAGCCACAGCATCATG
TTCCTCCTCCACCTCTGCAGCAACCCATTCCTCAGTCCGCCCCCGCTACG
GCACCTCCGCTCCAAGCTCCTACTCCAGTTGGGGCCGGCCCCAATGCCAT
GGGTCAACAACAACCTCACATCAAGACCGAACCTGGCGTCAACGGTCAAC
CGGGGATGATTCCGATGAATAATATGATGATGCCAAACTCCTCCAACCCT
CAGTCTGCTCAAGAACGGGCTGCCAATATGCTTCGTCAGCGTTACGGCGC
AGCAGCCGCTAACTCGGTCAGTCAGCTGCAAGCACAGTCACAGGCACAAG
CAGCCATGGCCATGCCGGGCCAGCAGCGCCCCCAACCCATGCAGCATGTG
CCCAACGGACAGGCTCCACAGATCAAGCAAGAACCGGGTTACCCCCCTGT
GTCTCAACCCCCCGTCGGCAATACTCAAACGGACGGTGCCGGTGATGATG
CCTTGTCTGCATGGAAGGCTGAGGTTGCACGGAGGCGGGAAGCTGCTGAA
CGCCAGGGAGGAGAAGGCGATCGTCTCCTTCGTGAACATCTCAGACAACG
GATGCTCCAATTAGAAGGCGGTGGTCTGATGTTGCCTCTCGACGAGCATG
ACTACTCATCAAAGACATTGACTCGTGGGCTGGTGGCTACCCAAGCAGAG
CCAGCTGAGGTATCAGAAGTTGCTGGCTCCTCGTTGCATCCGCCCAAGGT
TCTCGGAGCTCAGTTTGACGGGCACGGTGTTCGATCGTGTCATCCAGGAG
GTCTGTGATGGCTCCCAGGTGGACTTCGAGGAAAGTGGTGTGGACCAGCA
AACACTGTTAGATTTGCGCAAGATGTCGAACCAGCAGGTGGTACGTCTTC
CACAAAGGTCAAGGAGAGTTCGAGTGGTAAGCCAGGTCATGCTTTGCACT
TACGACAAGGTACAACGCGTGAAGAACAAGTGGAAGTGCACACTTAAAGA
TGGTATTTTGACCACCGGTGGCAAGGAAGCTGGCAGAAGAAGCTCTCCTC
ATTGGGTGTCGCTCACTTCCCTTGGGATCCGCCGCCGCCGCAACCGGCTC
CCCCTCAGACGCAAAATATCCTCCCTCCTACAGCAACTGTACCATCAAAT
GCTCCCCGGCCTGGTCCGCCCCCTCAGCCACAGCATCATGTTCCTCCTCC
ACCTCTGCAGCAACCCATTCCTCAGTCCGCCCCCGCTACGGCACCTCCGC
TCCAAGCTCCTACTCCAGTTGGGGCCGGCCCCAATGCCATGGGTCAACAA
CAACCTCACATCAAGACCGAACCTGGCGTCAACGGTCAACCGGGGATGAT
TCCGATGAATAATATGATGATGCCAAACTCCTCCAACCCTCAGTCTGCTC
AAGAACGGGCTGCCAATATGCTTCGTCAGCGTTACGGCGCAGCAGCCGCT
AACTCGGTCAGTCAGCTGCAAGCACAGTCACAGGCACAAGCAGCCATGGC
CATGCCGGGCCAGCAGCGCCCCCAACCCATGCAGCATGTGCCCAACGGAC
AGGCTCCACAGATCAAGCAAGAACCGGGTTACCCCCCTGTGTCTCAACCC
CCCGTCGGCAATACTCAAACGGACGGTGCCGGTGATGATGCCTTGTCTGC
ATGGAAGGCTGAGGTTGCACGGAGGCGGGAAGCTGCTGAACGCCAGGGAG
GAGAAGGCGATCGTCTCCTTCGTGAACATCTCAGACAACGGATGCTCCAA
TTAGAAGGCGGTGGTCTGATGTTGCCTCTCGACGAGCATGACTACTCATC
AAAGACATTGACTCGTGGGCTGGTGGCTACCCAAGCAGAGCCAGCTGAGG
TATCAGAAGTTGCTGGCTCCTCGTTGCATCCGCCCAAGGTTCTCGGAGCT
CAGTTTGACGGGCACGGTGTTCGATCGTGTCATCCAGGAGGTCTGTGATG
GCTCCCAGGTGGACTTCGAGGAAAGTGGTGTGGACCAGCAAACACTGTTA
GATTTGCGCAAGATGTCGAACCAGCAGGTGGTACGTCTTCCACAAAGGTC
AAGGAGAGTTCGAGTGGTAAGCCAGGTCATGCTTTGCACTTACGACAAGG
TACAACGCGTGAAGAACAAGTGGAAGTGCACACTTAAAGATGGTATTTTG
ACCACCGGTGGCAAGGAAGCTGGCAGAAGAAGCTCTCCTCATTGGGTGTC
GCTCACTTCCCTTGGGATCCGCCGCCGCCGCAACCGGCTCCCCCTCAGAC
GCAAAATATCCTCCCTCCTACAGCAACTGTACCATCAAATGCTCCCCGGC
CTGGTCCGCCCCCTCAGCCACAGCATCATGTTCCTCCTCCACCTCTGCAG
CAACCCATTCCTCAGTCCGCCCCCGCTACGGCACCTCCGCTCCAAGCTCC
TACTCCAGTTGGGGCCGGCCCCAATGCCATGGGTCAACAACAACCTCACA
TCAAGACCGAACCTGGCGTCAACGGTCAACCGGGGATGATTCCGATGAAT
AATATGATGATGCCAAACTCCTCCAACCCTCAGTCTGCTCAAGAACGGGC
TGCCAATATGCTTCGTCAGCGTTACGGCGCAGCAGCCGCTAACTCGGTCA
GTCAGCTGCAAGCACAGTCACAGGCACAAGCAGCCATGGCCATGCCGGGC
CAGCAGCGCCCCCAACCCATGCAGCATGTGCCCAACGGACAGGCTCCACA
GATCAAGCAAGAACCGGGTTACCCCCCTGTGTCTCAACCCCCCGTCGGCA
ATACTCAAACGGACGGTGCCGGTGATGATGCCTTGTCTGCATGGAAGGCT
GAGGTTGCACGGAGGCGGGAAGCTGCTGAACGCCAGGGAGGAGAAGGCGA
TCGTCTCCTTCGTGAACATCTCAGACAACGGATGCTCCAATTAGAAGGCG
GTGGTCTGATGTTGCCTCTCGACGAGCATGACTACTCATCAAAGACATTG
ACTCGTGGGCTGGTGGCTACCCAAGCAGAGCCAGCTGAGGTATCAGAAGT
TGCTGGCTCCTCGTTGCATCCGCCCAAGGTTCTCGGAGCTCAGTTTGACG
GGCACGGTGTTCGATCGTGTCATCCAGGAGGTCTGTGATGGCTCCCAGGT
GGACTTCGAGGAAAGTGGTGTGGACCAGCAAACACTGTTAGATTTGCGCA
AGATGTCGAACCAGCAGGTGGTACGTCTTCCACAAAGGTCAAGGAGAGTT
CGAGTGGTAAGCCAGGTCATGCTTTGCACTTACGACAAGGTACAACGCGT
GAAGAACAAGTGGAAGTGCACACTTAAAGATGGTATTTTGACCACCGGTG
GCAAGGAAGCTGGCAGAAGAAGCTCTCCTCATTGGGTGTCGCTCACTTCC
CTTGGGATCCGCCGCCGCCGCAACCGGCTCCCCCTCAGACGCAAAATATC
CTCCCTCCTACAGCAACTGTACCATCAAATGCTCCCCGGCCTGGTCCGCC
CCCTCAGCCACAGCATCATGTTCCTCCTCCACCTCTGCAGCAACCCATTC
CTCAGTCCGCCCCCGCTACGGCACCTCCGCTCCAAGCTCCTACTCCAGTT
GGGGCCGGCCCCAATGCCATGGGTCAACAACAACCTCACATCAAGACCGA
ACCTGGCGTCAACGGTCAACCGGGGATGATTCCGATGAATAATATGATGA
TGCCAAACTCCTCCAACCCTCAGTCTGCTCAAGAACGGGCTGCCAATATG
CTTCGTCAGCGTTACGGCGCAGCAGCCGCTAACTCGGTCAGTCAGCTGCA
AGCACAGTCACAGGCACAAGCAGCCATGGCCATGCCGGGCCAGCAGCGCC
CCCAACCCATGCAGCATGTGCCCAACGGACAGGCTCCACAGATCAAGCAA
GAACCGGGTTACCCCCCTGTGTCTCAACCCCCCGTCGGCAATACTCAAAC
GGACGGTGCCGGTGATGATGCCTTGTCTGCATGGAAGGCTGAGGTTGCAC
GGAGGCGGGAAGCTGCTGAACGCCAGGGAGGAGAAGGCGATCGTCTCCTT
CGTGAACATCTCAGACAACGGATGCTCCAATTAGAAGGCGGTGGTCTGAT
GTTGCCTCTCGACGAGCATGACTACTCATCAAAGACATTGACTCGTGGGC
TGGTGGCTACCCAAGCAGAGCCAGCTGAGGTATCAGAAGTTGCTGGCTCC
TCGTTGCATCCGCCCAAGGTTCTCGGAGCTCAGTTTGACGGGCACGGTGT
TCGATCGTGTCATCCAGGAGGTCTGTGATGGCTCCCAGGTGGACTTCGAG
GAAAGTGGTGTGGACCAGCAAACACTGTTAGATTTGCGCAAGATGTCGAA
CCAGCAGGTGGTACGTCTTCCACAAAGGTCAAGGAGAGTTCGAGTGGTAA
GCCAGGTCATGCTTTGCACTTACGACAAGGTACAACGCGTGAAGAACAAG
TGGAAGTGCACACTTAAAGATGGTATTTTGACCACCGGTGGCAAGGAAGC
TGGCAGAAGAAGCTCTCCTCATTGGGTGTCGCTCACTTCCCTTGGGATCC
GCCGCCGCCGCAACCGGCTCCCCCTCAGACGCAAAATATCCTCCCTCCTA
CAGCAACTGTACCATCAAATGCTCCCCGGCCTGGTCCGCCCCCTCAGCCA
CAGCATCATGTTCCTCCTCCACCTCTGCAGCAACCCATTCCTCAGTCCGC
CCCCGCTACGGCACCTCCGCTCCAAGCTCCTACTCCAGTTGGGGCCGGCC
CCAATGCCATGGGTCAACAACAACCTCACATCAAGACCGAACCTGGCGTC
AACGGTCAACCGGGGATGATTCCGATGAATAATATGATGATGCCAAACTC
CTCCAACCCTCAGTCTGCTCAAGAACGGGCTGCCAATATGCTTCGTCAGC
GTTACGGCGCAGCAGCCGCTAACTCGGTCAGTCAGCTGCAAGCACAGTCA
CAGGCACAAGCAGCCATGGCCATGCCGGGCCAGCAGCGCCCCCAACCCAT
GCAGCATGTGCCCAACGGACAGGCTCCACAGATCAAGCAAGAACCGGGTT
ACCCCCCTGTGTCTCAACCCCCCGTCGGCAATACTCAAACGGACGGTGCC
GGTGATGATGCCTTGTCTGCATGGAAGGCTGAGGTTGCACGGAGGCGGGA
AGCTGCTGAACGCCAGGGAGGAGAAGGCGATCGTCTCCTTCGTGAACATC
TCAGACAACGGATGCTCCAATTAGAAGGCGGTGGTCTGATGTTGCCTCTC
GACGAGCATGACTACTCATCAAAGACATTGACTCGTGGGCTGGTGGCTAC
CCAAGCAGAGCCAGCTGAGGTATCAGAAGTTGCTGGCTCCTCGTTGCATC
CGCCCAAGGTTCTCGGAGCTCAGTTTGACGGGCACGGTGTTCGATCGTGT
CATCCAGGAGGTCTGTGATGGCTCCCAGGTGGACTTCGAGGAAAGTGGTG
TGGACCAGCAAACACTGTTAGATTTGCGCAAGATGTCGAACCAGCAGGTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005672transcription factor TFIIA complex
Vocabulary: Biological Process
TermDefinition
GO:0006367transcription initiation from RNA polymerase II promoter
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_37010CAN33_37010Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_37010-T1CAN33_37010-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_37010-T1.cdsCAN33_37010-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_37010-T1.exon5CAN33_37010-T1.exon5Aspergillus niger FDAARGOS_311exon
CAN33_37010-T1.exon4CAN33_37010-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_37010-T1.exon3CAN33_37010-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_37010-T1.exon2CAN33_37010-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_37010-T1.exon1CAN33_37010-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteBUSCO:EOG092651HW
DBxrefInterPro:IPR009088
DBxrefInterPro:IPR004855
DBxrefPFAM:PF03153
ProductTranscription factor IIA alpha/beta subunit family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000017.1supercontigNKJJ01000017.1:596130..597949 -
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