You are here

Home

CAN33_37055-T1, CAN33_37055-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_37055-T1
Unique NameCAN33_37055-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000017.1:631152..632516-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_37055-T1 ID=CAN33_37055-T1|Name=CAN33_37055-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1365bp|location=Sequence derived from alignment at NKJJ01000017.1:631152..632516- (Aspergillus niger FDAARGOS_311)
ATGGCAAATTCCAAGTATCTTCCCTACCTCTTTAATATTCTTTGAGAGCC
GCTGCTAACCTCCACAGATATGAATACGTCAAATCATTCGAGCAACCGGA
CGCTCTACTCCCCAATACATGGATTGTGGTCCGGATCGATGGCAGAGGCT
TCCACAAGTCAGTGCCACCTCTCTTTCAAAGCTCCAACATGACGCTGCGC
TCCTGATCAACTGCTATTAGCAGCTGAGATAACATCTAATTTCATCAGCT
GGCTGTCTACATGTTGCTAACTGAAAGAATGTAGACTCTCTGATCACTAC
GGCTTCATAAAGCCCAACGACCGCCGGGCCATAGACCTAATGAATGCTGC
AGCAGTCGGCGTCATGAAAGACCTACCTGATCTTTGCATCGCCTACGGTA
TTAGCGATGAGTACAGGTACATGATGTGGCATGCTCCTGGTCAAATGTGG
CGATATTGACTTGACATTAGTTTTGCTTTTCATCCCAACTGCCAATTGTT
CGAGCGGCGGAGTGCGTAAGTCATCTCTTTTTTTTTCGCGCAATATTTCA
TGTCCACTAGCAGTATGAACTTACTTGCCTTGGGGATGCAGCAAGTTAGT
AACGACTATTGTGTCAACATTCACGGCACATTATATCTATCTGTGGGGAA
CGTATTTCCCAGATACGCCGCTCCAGCCAGCGGCTCTGCCTTCGTTTGAT
GGAAGAGCAGTGATGTATCCGAACTCTAGGATATTTAGGGATTATATGAG
CTGGCGGCAGGTGGATTGTGAGTTTTATTCCATTCGCAGCATAAATGTTC
CTTCGGGTTGTTGTGTGCTAATATGCTGCAGGTCATATTAACAATCTTTA
CAATACGACATTTTGGACCATGGTCCTACAAGGTGGGATGGATAGAAGAG
AAGCTGAACTGGAATTGAAGGTGAGTTTCTGGTTTTGAGAGATGCTGCTG
CTGCTAACAGTGTGAACTAGGGCACCCTGTCTTCTGACAAGAATGAGATC
CTCTTCAAGAGGTTCGGTATCAACTATAATAATGAAGAAGAGATCTATAA
GAAGGGCAGCGTCATCTATCGCCAGGTATGTGTGTCTCCGCTGCCTCGTA
TGTGTGGCTACTGACCAAGATACAGTATCAACTAGAGGATGTGAAAGCCA
AACCGGACTCCAGCGTGCAGGAAGAAACATCACCATTGCAGGAGGACACA
CCCTCCAAGACACAGCAGGAAAAGATCCGCAAACTGCGTCGCAAAGTGCA
GGTCGTGGTCGATCATGTCGACATCATCAAGGATGAGTTCTGGGAGAGAC
GGCCTTGGATTCTCTCTGGCAAGCCCGGAAAGCTGCCTACAGAGGCTAAG
CAAGTAGCATCATGA
back to top

Coding sequence (CDS) from alignment at NKJJ01000017.1:631152..632516-

>CAN33_37055-T1 ID=CAN33_37055-T1|Name=CAN33_37055-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=7128bp|location=Sequence derived from alignment at NKJJ01000017.1:631152..632516- (Aspergillus niger FDAARGOS_311)
TATCAACTAGAGGATGTGAAAGCCAAACCGGACTCCAGCGTGCAGGAAGA
AACATCACCATTGCAGGAGGACACACCCTCCAAGACACAGCAGGAAAAGA
TCCGCAAACTGCGTCGCAAAGTGCAGGTCGTGGTCGATCATGTCGACATC
ATCAAGGATGAGTTCTGGGAGAGACGGCCTTGGATTCTCTCTGGCAAGCC
CGGAAAGCTGCCTACAGAGGCTAAGCAAGTAGCATCATGAGGCACCCTGT
CTTCTGACAAGAATGAGATCCTCTTCAAGAGGTTCGGTATCAACTATAAT
AATGAAGAAGAGATCTATAAGAAGGGCAGCGTCATCTATCGCCAGGTCAT
ATTAACAATCTTTACAATACGACATTTTGGACCATGGTCCTACAAGGTGG
GATGGATAGAAGAGAAGCTGAACTGGAATTGAAGCAAGTTAGTAACGACT
ATTGTGTCAACATTCACGGCACATTATATCTATCTGTGGGGAACGTATTT
CCCAGATACGCCGCTCCAGCCAGCGGCTCTGCCTTCGTTTGATGGAAGAG
CAGTGATGTATCCGAACTCTAGGATATTTAGGGATTATATGAGCTGGCGG
CAGGTGGATTTTTTGCTTTTCATCCCAACTGCCAATTGTTCGAGCGGCGG
AGTGCACTCTCTGATCACTACGGCTTCATAAAGCCCAACGACCGCCGGGC
CATAGACCTAATGAATGCTGCAGCAGTCGGCGTCATGAAAGACCTACCTG
ATCTTTGCATCGCCTACGGTATTAGCGATGAGTACAGATATGAATACGTC
AAATCATTCGAGCAACCGGACGCTCTACTCCCCAATACATGGATTGTGGT
CCGGATCGATGGCAGAGGCTTCCACAAATGGCAAATTCCAATATCAACTA
GAGGATGTGAAAGCCAAACCGGACTCCAGCGTGCAGGAAGAAACATCACC
ATTGCAGGAGGACACACCCTCCAAGACACAGCAGGAAAAGATCCGCAAAC
TGCGTCGCAAAGTGCAGGTCGTGGTCGATCATGTCGACATCATCAAGGAT
GAGTTCTGGGAGAGACGGCCTTGGATTCTCTCTGGCAAGCCCGGAAAGCT
GCCTACAGAGGCTAAGCAAGTAGCATCATGAGGCACCCTGTCTTCTGACA
AGAATGAGATCCTCTTCAAGAGGTTCGGTATCAACTATAATAATGAAGAA
GAGATCTATAAGAAGGGCAGCGTCATCTATCGCCAGGTCATATTAACAAT
CTTTACAATACGACATTTTGGACCATGGTCCTACAAGGTGGGATGGATAG
AAGAGAAGCTGAACTGGAATTGAAGCAAGTTAGTAACGACTATTGTGTCA
ACATTCACGGCACATTATATCTATCTGTGGGGAACGTATTTCCCAGATAC
GCCGCTCCAGCCAGCGGCTCTGCCTTCGTTTGATGGAAGAGCAGTGATGT
ATCCGAACTCTAGGATATTTAGGGATTATATGAGCTGGCGGCAGGTGGAT
TTTTTGCTTTTCATCCCAACTGCCAATTGTTCGAGCGGCGGAGTGCACTC
TCTGATCACTACGGCTTCATAAAGCCCAACGACCGCCGGGCCATAGACCT
AATGAATGCTGCAGCAGTCGGCGTCATGAAAGACCTACCTGATCTTTGCA
TCGCCTACGGTATTAGCGATGAGTACAGATATGAATACGTCAAATCATTC
GAGCAACCGGACGCTCTACTCCCCAATACATGGATTGTGGTCCGGATCGA
TGGCAGAGGCTTCCACAAATGGCAAATTCCAATATCAACTAGAGGATGTG
AAAGCCAAACCGGACTCCAGCGTGCAGGAAGAAACATCACCATTGCAGGA
GGACACACCCTCCAAGACACAGCAGGAAAAGATCCGCAAACTGCGTCGCA
AAGTGCAGGTCGTGGTCGATCATGTCGACATCATCAAGGATGAGTTCTGG
GAGAGACGGCCTTGGATTCTCTCTGGCAAGCCCGGAAAGCTGCCTACAGA
GGCTAAGCAAGTAGCATCATGAGGCACCCTGTCTTCTGACAAGAATGAGA
TCCTCTTCAAGAGGTTCGGTATCAACTATAATAATGAAGAAGAGATCTAT
AAGAAGGGCAGCGTCATCTATCGCCAGGTCATATTAACAATCTTTACAAT
ACGACATTTTGGACCATGGTCCTACAAGGTGGGATGGATAGAAGAGAAGC
TGAACTGGAATTGAAGCAAGTTAGTAACGACTATTGTGTCAACATTCACG
GCACATTATATCTATCTGTGGGGAACGTATTTCCCAGATACGCCGCTCCA
GCCAGCGGCTCTGCCTTCGTTTGATGGAAGAGCAGTGATGTATCCGAACT
CTAGGATATTTAGGGATTATATGAGCTGGCGGCAGGTGGATTTTTTGCTT
TTCATCCCAACTGCCAATTGTTCGAGCGGCGGAGTGCACTCTCTGATCAC
TACGGCTTCATAAAGCCCAACGACCGCCGGGCCATAGACCTAATGAATGC
TGCAGCAGTCGGCGTCATGAAAGACCTACCTGATCTTTGCATCGCCTACG
GTATTAGCGATGAGTACAGATATGAATACGTCAAATCATTCGAGCAACCG
GACGCTCTACTCCCCAATACATGGATTGTGGTCCGGATCGATGGCAGAGG
CTTCCACAAATGGCAAATTCCAATATCAACTAGAGGATGTGAAAGCCAAA
CCGGACTCCAGCGTGCAGGAAGAAACATCACCATTGCAGGAGGACACACC
CTCCAAGACACAGCAGGAAAAGATCCGCAAACTGCGTCGCAAAGTGCAGG
TCGTGGTCGATCATGTCGACATCATCAAGGATGAGTTCTGGGAGAGACGG
CCTTGGATTCTCTCTGGCAAGCCCGGAAAGCTGCCTACAGAGGCTAAGCA
AGTAGCATCATGAGGCACCCTGTCTTCTGACAAGAATGAGATCCTCTTCA
AGAGGTTCGGTATCAACTATAATAATGAAGAAGAGATCTATAAGAAGGGC
AGCGTCATCTATCGCCAGGTCATATTAACAATCTTTACAATACGACATTT
TGGACCATGGTCCTACAAGGTGGGATGGATAGAAGAGAAGCTGAACTGGA
ATTGAAGCAAGTTAGTAACGACTATTGTGTCAACATTCACGGCACATTAT
ATCTATCTGTGGGGAACGTATTTCCCAGATACGCCGCTCCAGCCAGCGGC
TCTGCCTTCGTTTGATGGAAGAGCAGTGATGTATCCGAACTCTAGGATAT
TTAGGGATTATATGAGCTGGCGGCAGGTGGATTTTTTGCTTTTCATCCCA
ACTGCCAATTGTTCGAGCGGCGGAGTGCACTCTCTGATCACTACGGCTTC
ATAAAGCCCAACGACCGCCGGGCCATAGACCTAATGAATGCTGCAGCAGT
CGGCGTCATGAAAGACCTACCTGATCTTTGCATCGCCTACGGTATTAGCG
ATGAGTACAGATATGAATACGTCAAATCATTCGAGCAACCGGACGCTCTA
CTCCCCAATACATGGATTGTGGTCCGGATCGATGGCAGAGGCTTCCACAA
ATGGCAAATTCCAATATCAACTAGAGGATGTGAAAGCCAAACCGGACTCC
AGCGTGCAGGAAGAAACATCACCATTGCAGGAGGACACACCCTCCAAGAC
ACAGCAGGAAAAGATCCGCAAACTGCGTCGCAAAGTGCAGGTCGTGGTCG
ATCATGTCGACATCATCAAGGATGAGTTCTGGGAGAGACGGCCTTGGATT
CTCTCTGGCAAGCCCGGAAAGCTGCCTACAGAGGCTAAGCAAGTAGCATC
ATGAGGCACCCTGTCTTCTGACAAGAATGAGATCCTCTTCAAGAGGTTCG
GTATCAACTATAATAATGAAGAAGAGATCTATAAGAAGGGCAGCGTCATC
TATCGCCAGGTCATATTAACAATCTTTACAATACGACATTTTGGACCATG
GTCCTACAAGGTGGGATGGATAGAAGAGAAGCTGAACTGGAATTGAAGCA
AGTTAGTAACGACTATTGTGTCAACATTCACGGCACATTATATCTATCTG
TGGGGAACGTATTTCCCAGATACGCCGCTCCAGCCAGCGGCTCTGCCTTC
GTTTGATGGAAGAGCAGTGATGTATCCGAACTCTAGGATATTTAGGGATT
ATATGAGCTGGCGGCAGGTGGATTTTTTGCTTTTCATCCCAACTGCCAAT
TGTTCGAGCGGCGGAGTGCACTCTCTGATCACTACGGCTTCATAAAGCCC
AACGACCGCCGGGCCATAGACCTAATGAATGCTGCAGCAGTCGGCGTCAT
GAAAGACCTACCTGATCTTTGCATCGCCTACGGTATTAGCGATGAGTACA
GATATGAATACGTCAAATCATTCGAGCAACCGGACGCTCTACTCCCCAAT
ACATGGATTGTGGTCCGGATCGATGGCAGAGGCTTCCACAAATGGCAAAT
TCCAATATCAACTAGAGGATGTGAAAGCCAAACCGGACTCCAGCGTGCAG
GAAGAAACATCACCATTGCAGGAGGACACACCCTCCAAGACACAGCAGGA
AAAGATCCGCAAACTGCGTCGCAAAGTGCAGGTCGTGGTCGATCATGTCG
ACATCATCAAGGATGAGTTCTGGGAGAGACGGCCTTGGATTCTCTCTGGC
AAGCCCGGAAAGCTGCCTACAGAGGCTAAGCAAGTAGCATCATGAGGCAC
CCTGTCTTCTGACAAGAATGAGATCCTCTTCAAGAGGTTCGGTATCAACT
ATAATAATGAAGAAGAGATCTATAAGAAGGGCAGCGTCATCTATCGCCAG
GTCATATTAACAATCTTTACAATACGACATTTTGGACCATGGTCCTACAA
GGTGGGATGGATAGAAGAGAAGCTGAACTGGAATTGAAGCAAGTTAGTAA
CGACTATTGTGTCAACATTCACGGCACATTATATCTATCTGTGGGGAACG
TATTTCCCAGATACGCCGCTCCAGCCAGCGGCTCTGCCTTCGTTTGATGG
AAGAGCAGTGATGTATCCGAACTCTAGGATATTTAGGGATTATATGAGCT
GGCGGCAGGTGGATTTTTTGCTTTTCATCCCAACTGCCAATTGTTCGAGC
GGCGGAGTGCACTCTCTGATCACTACGGCTTCATAAAGCCCAACGACCGC
CGGGCCATAGACCTAATGAATGCTGCAGCAGTCGGCGTCATGAAAGACCT
ACCTGATCTTTGCATCGCCTACGGTATTAGCGATGAGTACAGATATGAAT
ACGTCAAATCATTCGAGCAACCGGACGCTCTACTCCCCAATACATGGATT
GTGGTCCGGATCGATGGCAGAGGCTTCCACAAATGGCAAATTCCAATATC
AACTAGAGGATGTGAAAGCCAAACCGGACTCCAGCGTGCAGGAAGAAACA
TCACCATTGCAGGAGGACACACCCTCCAAGACACAGCAGGAAAAGATCCG
CAAACTGCGTCGCAAAGTGCAGGTCGTGGTCGATCATGTCGACATCATCA
AGGATGAGTTCTGGGAGAGACGGCCTTGGATTCTCTCTGGCAAGCCCGGA
AAGCTGCCTACAGAGGCTAAGCAAGTAGCATCATGAGGCACCCTGTCTTC
TGACAAGAATGAGATCCTCTTCAAGAGGTTCGGTATCAACTATAATAATG
AAGAAGAGATCTATAAGAAGGGCAGCGTCATCTATCGCCAGGTCATATTA
ACAATCTTTACAATACGACATTTTGGACCATGGTCCTACAAGGTGGGATG
GATAGAAGAGAAGCTGAACTGGAATTGAAGCAAGTTAGTAACGACTATTG
TGTCAACATTCACGGCACATTATATCTATCTGTGGGGAACGTATTTCCCA
GATACGCCGCTCCAGCCAGCGGCTCTGCCTTCGTTTGATGGAAGAGCAGT
GATGTATCCGAACTCTAGGATATTTAGGGATTATATGAGCTGGCGGCAGG
TGGATTTTTTGCTTTTCATCCCAACTGCCAATTGTTCGAGCGGCGGAGTG
CACTCTCTGATCACTACGGCTTCATAAAGCCCAACGACCGCCGGGCCATA
GACCTAATGAATGCTGCAGCAGTCGGCGTCATGAAAGACCTACCTGATCT
TTGCATCGCCTACGGTATTAGCGATGAGTACAGATATGAATACGTCAAAT
CATTCGAGCAACCGGACGCTCTACTCCCCAATACATGGATTGTGGTCCGG
ATCGATGGCAGAGGCTTCCACAAATGGCAAATTCCAATATCAACTAGAGG
ATGTGAAAGCCAAACCGGACTCCAGCGTGCAGGAAGAAACATCACCATTG
CAGGAGGACACACCCTCCAAGACACAGCAGGAAAAGATCCGCAAACTGCG
TCGCAAAGTGCAGGTCGTGGTCGATCATGTCGACATCATCAAGGATGAGT
TCTGGGAGAGACGGCCTTGGATTCTCTCTGGCAAGCCCGGAAAGCTGCCT
ACAGAGGCTAAGCAAGTAGCATCATGAGGCACCCTGTCTTCTGACAAGAA
TGAGATCCTCTTCAAGAGGTTCGGTATCAACTATAATAATGAAGAAGAGA
TCTATAAGAAGGGCAGCGTCATCTATCGCCAGGTCATATTAACAATCTTT
ACAATACGACATTTTGGACCATGGTCCTACAAGGTGGGATGGATAGAAGA
GAAGCTGAACTGGAATTGAAGCAAGTTAGTAACGACTATTGTGTCAACAT
TCACGGCACATTATATCTATCTGTGGGGAACGTATTTCCCAGATACGCCG
CTCCAGCCAGCGGCTCTGCCTTCGTTTGATGGAAGAGCAGTGATGTATCC
GAACTCTAGGATATTTAGGGATTATATGAGCTGGCGGCAGGTGGATTTTT
TGCTTTTCATCCCAACTGCCAATTGTTCGAGCGGCGGAGTGCACTCTCTG
ATCACTACGGCTTCATAAAGCCCAACGACCGCCGGGCCATAGACCTAATG
AATGCTGCAGCAGTCGGCGTCATGAAAGACCTACCTGATCTTTGCATCGC
CTACGGTATTAGCGATGAGTACAGATATGAATACGTCAAATCATTCGAGC
AACCGGACGCTCTACTCCCCAATACATGGATTGTGGTCCGGATCGATGGC
AGAGGCTTCCACAAATGGCAAATTCCAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0000287magnesium ion binding
GO:0008193tRNA guanylyltransferase activity
Vocabulary: Biological Process
TermDefinition
GO:0006400tRNA modification
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RGT1CAN33_37055Aspergillus niger FDAARGOS_311gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_37055-T1CAN33_37055-T1-proteinAspergillus niger FDAARGOS_311polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_37055-T1.cdsCAN33_37055-T1.cdsAspergillus niger FDAARGOS_311CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_37055-T1.exon8CAN33_37055-T1.exon8Aspergillus niger FDAARGOS_311exon
CAN33_37055-T1.exon7CAN33_37055-T1.exon7Aspergillus niger FDAARGOS_311exon
CAN33_37055-T1.exon6CAN33_37055-T1.exon6Aspergillus niger FDAARGOS_311exon
CAN33_37055-T1.exon5CAN33_37055-T1.exon5Aspergillus niger FDAARGOS_311exon
CAN33_37055-T1.exon4CAN33_37055-T1.exon4Aspergillus niger FDAARGOS_311exon
CAN33_37055-T1.exon3CAN33_37055-T1.exon3Aspergillus niger FDAARGOS_311exon
CAN33_37055-T1.exon2CAN33_37055-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_37055-T1.exon1CAN33_37055-T1.exon1Aspergillus niger FDAARGOS_311exon


Properties
Property NameValue
NoteBUSCO:EOG09264G0H
DBxrefInterPro:IPR025845
DBxrefInterPro:IPR038469
DBxrefInterPro:IPR007537
DBxrefInterPro:IPR024956
DBxrefPFAM:PF14413
DBxrefPFAM:PF04446
ProductGlucose-responsive transcription factor
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000017.1supercontigNKJJ01000017.1:631152..632516 -
Powered by Drupal