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CAN33_37365-T1, CAN33_37365-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_37365-T1
Unique NameCAN33_37365-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000017.1:817286..818149+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_37365-T1 ID=CAN33_37365-T1|Name=CAN33_37365-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=864bp|location=Sequence derived from alignment at NKJJ01000017.1:817286..818149+ (Aspergillus niger FDAARGOS_311)
ATGGACGAGGACTACTCTGCAGGCTCCGTGGACGCCGACCGCGAGATGAC
CAGGCTCTGGCGCACATGGCGGACAGTCTTTGAGATGCTTTTGGATCGTG
TAAGAATTTTCTCCAGTTCCAGCTCCAGCGACGCTACAATAGCCACCCCG
CGAACATTCCACTGACCGAATCCCCAAATCCACAGGGCTACGAGGTGACC
GAAGATGAAGTCCAAATGCCTCTCCACGAGTTCAAGCAGAAATATTCCGA
CCCTCTAGGATACCCCGAGTATGCGCGCCTTCTATCCCATCCAATTCCCC
CAGTCAACTCCCATCTAACCCAAAATCCCATCACACAGCCGCAACAAGAT
GAAAATCAGCGCCCGGCCCACGGAAGCCATGCAAGCGAAATACACCCCCC
TGCCCAGCAAATCCAACCCGAACCCCCAGCCCGACTGCGGTACCATCTAC
GTTGAATTCTGCCCGGACTCGACCGGCGTCGGCACCAAGCAAGTGCGTAC
CTTCAACCACTTCGTCGACGAGAACAACTTCCACACCGGCGTGTTCATCA
CCCAGACTCCGATCTCGCCATCCGCTGTGCGCCTGCTGAGCAGCATGCCC
GGCCGCATCTGCGAGCATTTCCAGGAGCAGGATCTGCTGGTCAACATCAC
CCGCCACGAACTGGTCCCGAAACACGTCCTGCTTAGCCCCGATGAGAAGG
CTCGTTTGTTGGAACGCTACCGTCTGAAGGAGTCGCAGTTGCCTCGTATA
CAGGTGTCTGATCCTGTTGCCAGATACCTGGGTCTGCGCAGAGGTCAGGT
CGTGAAGATTATTCGGAGAAGTGAGACGGCTGGTCGGTATGCCAGTTATC
GGTGGGTTATATAA
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Coding sequence (CDS) from alignment at NKJJ01000017.1:817286..818149+

>CAN33_37365-T1 ID=CAN33_37365-T1|Name=CAN33_37365-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2124bp|location=Sequence derived from alignment at NKJJ01000017.1:817286..818149+ (Aspergillus niger FDAARGOS_311)
ATGGACGAGGACTACTCTGCAGGCTCCGTGGACGCCGACCGCGAGATGAC
CAGGCTCTGGCGCACATGGCGGACAGTCTTTGAGATGCTTTTGGATCGTG
GCTACGAGGTGACCGAAGATGAAGTCCAAATGCCTCTCCACGAGTTCAAG
CAGAAATATTCCGACCCTCTAGGATACCCCGACCGCAACAAGATGAAAAT
CAGCGCCCGGCCCACGGAAGCCATGCAAGCGAAATACACCCCCCTGCCCA
GCAAATCCAACCCGAACCCCCAGCCCGACTGCGGTACCATCTACGTTGAA
TTCTGCCCGGACTCGACCGGCGTCGGCACCAAGCAAGTGCGTACCTTCAA
CCACTTCGTCGACGAGAACAACTTCCACACCGGCGTGTTCATCACCCAGA
CTCCGATCTCGCCATCCGCTGTGCGCCTGCTGAGCAGCATGCCCGGCCGC
ATCTGCGAGCATTTCCAGGAGCAGGATCTGCTGGTCAACATCACCCGCCA
CGAACTGGTCCCGAAACACGTCCTGCTTAGCCCCGATGAGAAGGCTCGTT
TGTTGGAACGCTACCGTCTGAAGGAGTCGCAGTTGCCTCGTATACAGGTG
TCTGATCCTGTTGCCAGATACCTGGGTCTGCGCAGAGGTCAGGTCGTGAA
GATTATTCGGAGAAGTGAGACGGCTGGTCGGTATGCCAGTTATCGGTGGG
TTATATAAATGGACGAGGACTACTCTGCAGGCTCCGTGGACGCCGACCGC
GAGATGACCAGGCTCTGGCGCACATGGCGGACAGTCTTTGAGATGCTTTT
GGATCGTGGCTACGAGGTGACCGAAGATGAAGTCCAAATGCCTCTCCACG
AGTTCAAGCAGAAATATTCCGACCCTCTAGGATACCCCGACCGCAACAAG
ATGAAAATCAGCGCCCGGCCCACGGAAGCCATGCAAGCGAAATACACCCC
CCTGCCCAGCAAATCCAACCCGAACCCCCAGCCCGACTGCGGTACCATCT
ACGTTGAATTCTGCCCGGACTCGACCGGCGTCGGCACCAAGCAAGTGCGT
ACCTTCAACCACTTCGTCGACGAGAACAACTTCCACACCGGCGTGTTCAT
CACCCAGACTCCGATCTCGCCATCCGCTGTGCGCCTGCTGAGCAGCATGC
CCGGCCGCATCTGCGAGCATTTCCAGGAGCAGGATCTGCTGGTCAACATC
ACCCGCCACGAACTGGTCCCGAAACACGTCCTGCTTAGCCCCGATGAGAA
GGCTCGTTTGTTGGAACGCTACCGTCTGAAGGAGTCGCAGTTGCCTCGTA
TACAGGTGTCTGATCCTGTTGCCAGATACCTGGGTCTGCGCAGAGGTCAG
GTCGTGAAGATTATTCGGAGAAGTGAGACGGCTGGTCGGTATGCCAGTTA
TCGGTGGGTTATATAAATGGACGAGGACTACTCTGCAGGCTCCGTGGACG
CCGACCGCGAGATGACCAGGCTCTGGCGCACATGGCGGACAGTCTTTGAG
ATGCTTTTGGATCGTGGCTACGAGGTGACCGAAGATGAAGTCCAAATGCC
TCTCCACGAGTTCAAGCAGAAATATTCCGACCCTCTAGGATACCCCGACC
GCAACAAGATGAAAATCAGCGCCCGGCCCACGGAAGCCATGCAAGCGAAA
TACACCCCCCTGCCCAGCAAATCCAACCCGAACCCCCAGCCCGACTGCGG
TACCATCTACGTTGAATTCTGCCCGGACTCGACCGGCGTCGGCACCAAGC
AAGTGCGTACCTTCAACCACTTCGTCGACGAGAACAACTTCCACACCGGC
GTGTTCATCACCCAGACTCCGATCTCGCCATCCGCTGTGCGCCTGCTGAG
CAGCATGCCCGGCCGCATCTGCGAGCATTTCCAGGAGCAGGATCTGCTGG
TCAACATCACCCGCCACGAACTGGTCCCGAAACACGTCCTGCTTAGCCCC
GATGAGAAGGCTCGTTTGTTGGAACGCTACCGTCTGAAGGAGTCGCAGTT
GCCTCGTATACAGGTGTCTGATCCTGTTGCCAGATACCTGGGTCTGCGCA
GAGGTCAGGTCGTGAAGATTATTCGGAGAAGTGAGACGGCTGGTCGGTAT
GCCAGTTATCGGTGGGTTATATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0003899DNA-directed 5'-3' RNA polymerase activity
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006351transcription, DNA-templated
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_37365CAN33_37365Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_37365-T1.exon1CAN33_37365-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_37365-T1.exon2CAN33_37365-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_37365-T1.exon3CAN33_37365-T1.exon3Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_37365-T1.cdsCAN33_37365-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_37365-T1CAN33_37365-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09264904
DBxrefInterPro:IPR020609
DBxrefInterPro:IPR020608
DBxrefInterPro:IPR005571
DBxrefInterPro:IPR000783
DBxrefInterPro:IPR035913
DBxrefInterPro:IPR036710
DBxrefInterPro:IPR014381
DBxrefPFAM:PF03871
DBxrefPFAM:PF01191
ProductRNA polymerase Rpb5 C-terminal domain family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000017.1supercontigNKJJ01000017.1:817286..818149 +
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