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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000017.1:893447..894298+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_37490-T1 ID=CAN33_37490-T1|Name=CAN33_37490-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=852bp|location=Sequence derived from alignment at NKJJ01000017.1:893447..894298+ (Aspergillus niger FDAARGOS_311)
ATGAGCTACATCCTCACCCTCTCCTGCCCCGACCGCCCGGGCATCGTCCA
CGCCGTGACCGCCTACCTGGTGCAACAGAACCTCAACATCATCGACAGCA
GCCAATATGGCGACCCGACCAGCCAGCGCTTCTTCATGCGCGTGCACTTC
AAGGATGAATCCTCTCCCGCCAAGTCCCTCGACGACCTGCGCACCGCTTT
CCAGCCCACCGCCGAGTCCCTGACCATGACCTTCCAGCTCGTCCCCGCCT
CCTCCAAGCCCCGCGTGTTGATCATGGTCTCTAAGATCGGCCACTGCCTC
AACGACCTCCTCTTCCGCGCCTCGACTGGCCAGCTCCCCATCGAGATCCC
CCTCATCGTTTCCAACCACCCCGACTTCGCTACCCTGGCTGCTACCTACA
ACATCCCCTTCTTGCATCTCCCCGTGACCGCCGACACCAAGCCCCAGCAG
GAGGGACGCATCTTGGAGCTGATCCGCGAACACAACATTGATCTGGTTGT
CCTGGCCCGCTACATGCAAGTGCTGTCGCCTATGCTGTGCGAGGCCATGT
CTGGAAAGATCATCAACATTCATCACAGTTTCTTGCCCAGTTTCAAGGGT
GCTAAGCCTTACCACCAGGCTTTTGACCGCGGTGTCAAGATTGTCGGTGC
TACGGCGCACTTTGTCACCAGTGATTTGGATGAGGGTCCGATTATTGAGC
AGAATGTTGTGCGTGTCAACCACGCTATGAGCCCCAAGGAGTTGACTCAT
GCTGGATCCAACGTTGAGAGCAATGTCTTGGCTACGGCGGTGAAGTACTT
CGCTGAGCGGAGAGTCCTGCTCAACGGACACAAGACTGTTGTCTTCAACT
AG back to topCoding sequence (CDS) from alignment at NKJJ01000017.1:893447..894298+ >CAN33_37490-T1 ID=CAN33_37490-T1|Name=CAN33_37490-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=852bp|location=Sequence derived from alignment at NKJJ01000017.1:893447..894298+ (Aspergillus niger FDAARGOS_311)
ATGAGCTACATCCTCACCCTCTCCTGCCCCGACCGCCCGGGCATCGTCCA
CGCCGTGACCGCCTACCTGGTGCAACAGAACCTCAACATCATCGACAGCA
GCCAATATGGCGACCCGACCAGCCAGCGCTTCTTCATGCGCGTGCACTTC
AAGGATGAATCCTCTCCCGCCAAGTCCCTCGACGACCTGCGCACCGCTTT
CCAGCCCACCGCCGAGTCCCTGACCATGACCTTCCAGCTCGTCCCCGCCT
CCTCCAAGCCCCGCGTGTTGATCATGGTCTCTAAGATCGGCCACTGCCTC
AACGACCTCCTCTTCCGCGCCTCGACTGGCCAGCTCCCCATCGAGATCCC
CCTCATCGTTTCCAACCACCCCGACTTCGCTACCCTGGCTGCTACCTACA
ACATCCCCTTCTTGCATCTCCCCGTGACCGCCGACACCAAGCCCCAGCAG
GAGGGACGCATCTTGGAGCTGATCCGCGAACACAACATTGATCTGGTTGT
CCTGGCCCGCTACATGCAAGTGCTGTCGCCTATGCTGTGCGAGGCCATGT
CTGGAAAGATCATCAACATTCATCACAGTTTCTTGCCCAGTTTCAAGGGT
GCTAAGCCTTACCACCAGGCTTTTGACCGCGGTGTCAAGATTGTCGGTGC
TACGGCGCACTTTGTCACCAGTGATTTGGATGAGGGTCCGATTATTGAGC
AGAATGTTGTGCGTGTCAACCACGCTATGAGCCCCAAGGAGTTGACTCAT
GCTGGATCCAACGTTGAGAGCAATGTCTTGGCTACGGCGGTGAAGTACTT
CGCTGAGCGGAGAGTCCTGCTCAACGGACACAAGACTGTTGTCTTCAACT
AG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0009058 | biosynthetic process |
| GO:0006189 | 'de novo' IMP biosynthetic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016742 | hydroxymethyl-, formyl- and related transferase activity |
| GO:0008864 | formyltetrahydrofolate deformylase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036477 |
| DBxref | InterPro:IPR041729 |
| DBxref | InterPro:IPR002912 |
| DBxref | InterPro:IPR002376 |
| DBxref | InterPro:IPR004810 |
| DBxref | PFAM:PF00551 |
| DBxref | PFAM:PF01842 |
| Product | formyltetrahydrofolate deformylase |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000017.1 | supercontig | NKJJ01000017.1:893447..894298 + |
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