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CAN33_3750-T1, CAN33_3750-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_3750-T1
Unique NameCAN33_3750-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000004.1:2394335..2395503+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_3750-T1 ID=CAN33_3750-T1|Name=CAN33_3750-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1169bp|location=Sequence derived from alignment at NKJJ01000004.1:2394335..2395503+ (Aspergillus niger FDAARGOS_311)
ATGGCGTTTCAACCTACACCGGCGGACATTTCTGTCGCCATTACCACGCC
CATGGCAAGCTCCAGTGCCGAGCCACGCTTGCTAACAGAGCGTCGTATCA
CTCCCACATGGAGCGTCTCGCAGCTCAAAGGCAAGCTGGAGACCATGACT
GGCGTACCTCCCGGTAGCCAGCGGCTGCTTCTCAAGTCCCCAGGCCGTCC
TGACCAATGGGTTGAAGGTGACGACTCCATCATTGGGGATTGGGGTTTGA
TGAAAGGTTGTGAGATTGAGGTAGGTCTTGTTCTTCTGTTCATCTCAATT
TCCGGCATCCTCGGCTTTCCAAGCCTCTGGGATTATAGTTACTGGTTAAA
GATCGGTTTTGATTGTCACCCGCTCAACGAATCCATGTCTTGCTTCTTTA
AGACCTTGGTTTCCTTTTGTTCCACTCGGAGACACATCTCAACCAGGATT
GCCGGTTCATACCATGAGCCTATACTCATGTCTCAACCTAGGTCCACGAC
ACTCGGCCTCAATCAGCCCGGCCAAATTTCACCGACCTATCATCCGTCGA
GAAATACGTCCTTCCTACATCCACCTACGAATCACTCTCGAACTCCGTCC
TAGCATGGAAGAAGAACCAAAAACTTGGCCGGTTCGATCCAAACGCTCTA
ACCCCCGAAGAGTCGATCCGCCAGCAATCAGAGAGAGATGCGGCGGAGAT
TCAACAAAGAGGTGAGTAACAAGATATCCTCGACCTTGTTACCCGGGTCG
GGGGAGTTGGGTCCGCGAACTTTCGATTCGAAAAGGATCAGTCCTGGGGT
TTGAAGCAGAAGAATCCTAATGATTGTACGTATCTAGGTATTGCTATTGA
TAAACGTGCTATCGTCTTGCCCTCGTCCCCGCCTCATATCCGACGAGGAA
CGATTCGGTTTGTTGGTCCAGTGCCTACGATCCCTTTCCCGGGCGTGGAC
CCCAAGAAGGTGCAATTAGATTCCGAGGCTCTCCCTATCTGGGTTGGCAT
TGAGCTTGATGAGCCGTTGGGGAAGAACGATGGCAGCGTAGGCGGCCAAA
GGTTCTTCACCTGCCCGAATAAGACTGGTGTTTTCGTGAAGCCTGAGAAA
GTCGAGGTAGGAGACTTCCCGCCGTTGGAGTTGGATGACCTGGATGATGA
AATCATGGAGGAGATTTGA
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Coding sequence (CDS) from alignment at NKJJ01000004.1:2394335..2395503+

>CAN33_3750-T1 ID=CAN33_3750-T1|Name=CAN33_3750-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=2466bp|location=Sequence derived from alignment at NKJJ01000004.1:2394335..2395503+ (Aspergillus niger FDAARGOS_311)
ATGGCGTTTCAACCTACACCGGCGGACATTTCTGTCGCCATTACCACGCC
CATGGCAAGCTCCAGTGCCGAGCCACGCTTGCTAACAGAGCGTCGTATCA
CTCCCACATGGAGCGTCTCGCAGCTCAAAGGCAAGCTGGAGACCATGACT
GGCGTACCTCCCGGTAGCCAGCGGCTGCTTCTCAAGTCCCCAGGCCGTCC
TGACCAATGGGTTGAAGGTGACGACTCCATCATTGGGGATTGGGGTTTGA
TGAAAGGTTGTGAGATTGAGGTCCACGACACTCGGCCTCAATCAGCCCGG
CCAAATTTCACCGACCTATCATCCGTCGAGAAATACGTCCTTCCTACATC
CACCTACGAATCACTCTCGAACTCCGTCCTAGCATGGAAGAAGAACCAAA
AACTTGGCCGGTTCGATCCAAACGCTCTAACCCCCGAAGAGTCGATCCGC
CAGCAATCAGAGAGAGATGCGGCGGAGATTCAACAAAGAGGTATTGCTAT
TGATAAACGTGCTATCGTCTTGCCCTCGTCCCCGCCTCATATCCGACGAG
GAACGATTCGGTTTGTTGGTCCAGTGCCTACGATCCCTTTCCCGGGCGTG
GACCCCAAGAAGGTGCAATTAGATTCCGAGGCTCTCCCTATCTGGGTTGG
CATTGAGCTTGATGAGCCGTTGGGGAAGAACGATGGCAGCGTAGGCGGCC
AAAGGTTCTTCACCTGCCCGAATAAGACTGGTGTTTTCGTGAAGCCTGAG
AAAGTCGAGGTAGGAGACTTCCCGCCGTTGGAGTTGGATGACCTGGATGA
TGAAATCATGGAGGAGATTTGAATGGCGTTTCAACCTACACCGGCGGACA
TTTCTGTCGCCATTACCACGCCCATGGCAAGCTCCAGTGCCGAGCCACGC
TTGCTAACAGAGCGTCGTATCACTCCCACATGGAGCGTCTCGCAGCTCAA
AGGCAAGCTGGAGACCATGACTGGCGTACCTCCCGGTAGCCAGCGGCTGC
TTCTCAAGTCCCCAGGCCGTCCTGACCAATGGGTTGAAGGTGACGACTCC
ATCATTGGGGATTGGGGTTTGATGAAAGGTTGTGAGATTGAGGTCCACGA
CACTCGGCCTCAATCAGCCCGGCCAAATTTCACCGACCTATCATCCGTCG
AGAAATACGTCCTTCCTACATCCACCTACGAATCACTCTCGAACTCCGTC
CTAGCATGGAAGAAGAACCAAAAACTTGGCCGGTTCGATCCAAACGCTCT
AACCCCCGAAGAGTCGATCCGCCAGCAATCAGAGAGAGATGCGGCGGAGA
TTCAACAAAGAGGTATTGCTATTGATAAACGTGCTATCGTCTTGCCCTCG
TCCCCGCCTCATATCCGACGAGGAACGATTCGGTTTGTTGGTCCAGTGCC
TACGATCCCTTTCCCGGGCGTGGACCCCAAGAAGGTGCAATTAGATTCCG
AGGCTCTCCCTATCTGGGTTGGCATTGAGCTTGATGAGCCGTTGGGGAAG
AACGATGGCAGCGTAGGCGGCCAAAGGTTCTTCACCTGCCCGAATAAGAC
TGGTGTTTTCGTGAAGCCTGAGAAAGTCGAGGTAGGAGACTTCCCGCCGT
TGGAGTTGGATGACCTGGATGATGAAATCATGGAGGAGATTTGAATGGCG
TTTCAACCTACACCGGCGGACATTTCTGTCGCCATTACCACGCCCATGGC
AAGCTCCAGTGCCGAGCCACGCTTGCTAACAGAGCGTCGTATCACTCCCA
CATGGAGCGTCTCGCAGCTCAAAGGCAAGCTGGAGACCATGACTGGCGTA
CCTCCCGGTAGCCAGCGGCTGCTTCTCAAGTCCCCAGGCCGTCCTGACCA
ATGGGTTGAAGGTGACGACTCCATCATTGGGGATTGGGGTTTGATGAAAG
GTTGTGAGATTGAGGTCCACGACACTCGGCCTCAATCAGCCCGGCCAAAT
TTCACCGACCTATCATCCGTCGAGAAATACGTCCTTCCTACATCCACCTA
CGAATCACTCTCGAACTCCGTCCTAGCATGGAAGAAGAACCAAAAACTTG
GCCGGTTCGATCCAAACGCTCTAACCCCCGAAGAGTCGATCCGCCAGCAA
TCAGAGAGAGATGCGGCGGAGATTCAACAAAGAGGTATTGCTATTGATAA
ACGTGCTATCGTCTTGCCCTCGTCCCCGCCTCATATCCGACGAGGAACGA
TTCGGTTTGTTGGTCCAGTGCCTACGATCCCTTTCCCGGGCGTGGACCCC
AAGAAGGTGCAATTAGATTCCGAGGCTCTCCCTATCTGGGTTGGCATTGA
GCTTGATGAGCCGTTGGGGAAGAACGATGGCAGCGTAGGCGGCCAAAGGT
TCTTCACCTGCCCGAATAAGACTGGTGTTTTCGTGAAGCCTGAGAAAGTC
GAGGTAGGAGACTTCCCGCCGTTGGAGTTGGATGACCTGGATGATGAAAT
CATGGAGGAGATTTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_3750CAN33_3750Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_3750-T1.exon1CAN33_3750-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_3750-T1.exon2CAN33_3750-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_3750-T1.exon3CAN33_3750-T1.exon3Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_3750-T1.cdsCAN33_3750-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_3750-T1CAN33_3750-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteBUSCO:EOG0926505R
DBxrefInterPro:IPR029071
DBxrefInterPro:IPR000626
DBxrefInterPro:IPR036859
DBxrefInterPro:IPR000938
DBxrefPFAM:PF14560
DBxrefPFAM:PF01302
ProductCAP-Gly domain family protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000004.1supercontigNKJJ01000004.1:2394335..2395503 +
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