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CAN33_37500-T1, CAN33_37500-T1 (mRNA) Aspergillus niger FDAARGOS_311

Overview
NameCAN33_37500-T1
Unique NameCAN33_37500-T1
TypemRNA
OrganismAspergillus niger FDAARGOS_311
Sequences
The following sequences are available for this feature:

mRNA from alignment at NKJJ01000017.1:896970..897308+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CAN33_37500-T1 ID=CAN33_37500-T1|Name=CAN33_37500-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=339bp|location=Sequence derived from alignment at NKJJ01000017.1:896970..897308+ (Aspergillus niger FDAARGOS_311)
ATGTCCGACCAGGTGCAAGAGCTCCTTAACGTCCCTCGGGAGTTCCTCAG
GGAAGGCGTGCAGTTCGTCAACCGCAGCCAGAAGCGTGAGTTTCCCGTTG
CTTGTGCAGCACTCCTGGATTCAAGCTAATATGTTTTGTCAAAACAGCCG
ACAAGCGCGAGTTCATCAAGATCAGCCAGGCTGTGGGTACTGGTTTCCTG
ATCATGGGATTCATCGGTTACATCGTCAAGCTGAGTATGTTATCCTTGCC
ATTGGGTCCAGGTCCTGCTGAATCGGTAAACTGACTGACTGGTCTTAGTC
CACATCCCCGTTAACAACGTCCTTGTCGGTGGCGCGTAA
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Coding sequence (CDS) from alignment at NKJJ01000017.1:896970..897308+

>CAN33_37500-T1 ID=CAN33_37500-T1|Name=CAN33_37500-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=639bp|location=Sequence derived from alignment at NKJJ01000017.1:896970..897308+ (Aspergillus niger FDAARGOS_311)
ATGTCCGACCAGGTGCAAGAGCTCCTTAACGTCCCTCGGGAGTTCCTCAG
GGAAGGCGTGCAGTTCGTCAACCGCAGCCAGAAGCCCGACAAGCGCGAGT
TCATCAAGATCAGCCAGGCTGTGGGTACTGGTTTCCTGATCATGGGATTC
ATCGGTTACATCGTCAAGCTGATCCACATCCCCGTTAACAACGTCCTTGT
CGGTGGCGCGTAAATGTCCGACCAGGTGCAAGAGCTCCTTAACGTCCCTC
GGGAGTTCCTCAGGGAAGGCGTGCAGTTCGTCAACCGCAGCCAGAAGCCC
GACAAGCGCGAGTTCATCAAGATCAGCCAGGCTGTGGGTACTGGTTTCCT
GATCATGGGATTCATCGGTTACATCGTCAAGCTGATCCACATCCCCGTTA
ACAACGTCCTTGTCGGTGGCGCGTAAATGTCCGACCAGGTGCAAGAGCTC
CTTAACGTCCCTCGGGAGTTCCTCAGGGAAGGCGTGCAGTTCGTCAACCG
CAGCCAGAAGCCCGACAAGCGCGAGTTCATCAAGATCAGCCAGGCTGTGG
GTACTGGTTTCCTGATCATGGGATTCATCGGTTACATCGTCAAGCTGATC
CACATCCCCGTTAACAACGTCCTTGTCGGTGGCGCGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0015450P-P-bond-hydrolysis-driven protein transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0006886intracellular protein transport
GO:0006605protein targeting
GO:0015031protein transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CAN33_37500CAN33_37500Aspergillus niger FDAARGOS_311gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_37500-T1.exon1CAN33_37500-T1.exon1Aspergillus niger FDAARGOS_311exon
CAN33_37500-T1.exon2CAN33_37500-T1.exon2Aspergillus niger FDAARGOS_311exon
CAN33_37500-T1.exon3CAN33_37500-T1.exon3Aspergillus niger FDAARGOS_311exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CAN33_37500-T1.cdsCAN33_37500-T1.cdsAspergillus niger FDAARGOS_311CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CAN33_37500-T1CAN33_37500-T1-proteinAspergillus niger FDAARGOS_311polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09265PUI
DBxrefInterPro:IPR001901
DBxrefInterPro:IPR023391
DBxrefInterPro:IPR008158
DBxrefPFAM:PF00584
Productprotein translocase SEC61 complex gamma subunit archaeal and eukaryotic
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger FDAARGOS_311 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
NKJJ01000017.1supercontigNKJJ01000017.1:896970..897308 +
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