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Sequences
The following sequences are available for this feature:
mRNA from alignment at NKJJ01000004.1:2398491..2399549+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CAN33_3760-T1 ID=CAN33_3760-T1|Name=CAN33_3760-T1|organism=Aspergillus niger FDAARGOS_311|type=mRNA|length=1059bp|location=Sequence derived from alignment at NKJJ01000004.1:2398491..2399549+ (Aspergillus niger FDAARGOS_311)
ATGGGCGAATCTGCAGGCATCTCCACTGCCCCTCTCCAGGGGGAGTCTCC
CACTACTGCAACAGGCCTCTTCATCCCTCCAAGTATAGATCACTCTCGGC
TTTTCGCCGGGGAGTCCTATTCTTACTATTCACCCTGTCCTCCCGTCATT
GCAACCTCCAAAGTTAATGAACCTACTACGAACTCTTCACCAAATTACCT
TATCTTGGGTGTAGACGAGGCCGGACGCGGTCCAGTTCTAGGCCCCATGG
TCTACAGCGCCTTCTACTTGCCCCAAGATCTGCACCATACTCTCTTGACT
CGTGACTACAGCTTCAACGACAGCAAAGTCCTCACTCCCGGCGTACGCGC
TAATCTCATGAAGCTACTATGTACCCCGGGAAATCCCTTACACGAATCCT
GCGGATGGGCCGTGAAGCTACTATCAGCGCGTGACATCTCGTCCGGTATG
ATGCGGCCTGGAACGGGAGCTTATAACCTGAATGCGCAAGCAATGGATGC
TACCATTGAACTCATCCGTGGAATCATTGAAGATCGCAACATGGACGTGC
GAGAGGTCTACATCGATACGATTGGAAACCCCGCAACCTACCAACAGAAA
CTCGAGAAGATATTTCCATCACTCAGAATCACCGTGGCGAAGAAGGCCGA
CTCGTTATATCCGTGCGTGAGTGCTGCAAGTGTTGCTGCCAAAGTCACCA
GAGACGTCGCATTAGATCTCTGTCATCAAGCTATATACGAAGACACCCAT
GCGGAAGATTCACCGAGGGCGGTGGTGCCGCAGAGTTGGGGAAGCGGCTA
TCCCTCTGATTCAAAGTGTGCCAATTGGTTAAAGAAAAACATGGATCCGA
TTTTCGGATGGGGCAACGAATGCCGATTCAGTTGGGGCACCGCAAAAGAG
TTGCTCGAGTTGAAGGGAAGGCCAAAGGTCGATTGGCCTGGAGAAGAAGA
AAATACGCAGCTCAGGGACTTCCTCTTATCTTCGACCAGTAACACTACAA
AAGCTCAGCATGAGTTGCTGGAATGGTACGGGGCAAGGTCCACAGAGGTC
CTCTCTTAG back to topCoding sequence (CDS) from alignment at NKJJ01000004.1:2398491..2399549+ >CAN33_3760-T1 ID=CAN33_3760-T1|Name=CAN33_3760-T1|organism=Aspergillus niger FDAARGOS_311|type=CDS|length=1059bp|location=Sequence derived from alignment at NKJJ01000004.1:2398491..2399549+ (Aspergillus niger FDAARGOS_311)
ATGGGCGAATCTGCAGGCATCTCCACTGCCCCTCTCCAGGGGGAGTCTCC
CACTACTGCAACAGGCCTCTTCATCCCTCCAAGTATAGATCACTCTCGGC
TTTTCGCCGGGGAGTCCTATTCTTACTATTCACCCTGTCCTCCCGTCATT
GCAACCTCCAAAGTTAATGAACCTACTACGAACTCTTCACCAAATTACCT
TATCTTGGGTGTAGACGAGGCCGGACGCGGTCCAGTTCTAGGCCCCATGG
TCTACAGCGCCTTCTACTTGCCCCAAGATCTGCACCATACTCTCTTGACT
CGTGACTACAGCTTCAACGACAGCAAAGTCCTCACTCCCGGCGTACGCGC
TAATCTCATGAAGCTACTATGTACCCCGGGAAATCCCTTACACGAATCCT
GCGGATGGGCCGTGAAGCTACTATCAGCGCGTGACATCTCGTCCGGTATG
ATGCGGCCTGGAACGGGAGCTTATAACCTGAATGCGCAAGCAATGGATGC
TACCATTGAACTCATCCGTGGAATCATTGAAGATCGCAACATGGACGTGC
GAGAGGTCTACATCGATACGATTGGAAACCCCGCAACCTACCAACAGAAA
CTCGAGAAGATATTTCCATCACTCAGAATCACCGTGGCGAAGAAGGCCGA
CTCGTTATATCCGTGCGTGAGTGCTGCAAGTGTTGCTGCCAAAGTCACCA
GAGACGTCGCATTAGATCTCTGTCATCAAGCTATATACGAAGACACCCAT
GCGGAAGATTCACCGAGGGCGGTGGTGCCGCAGAGTTGGGGAAGCGGCTA
TCCCTCTGATTCAAAGTGTGCCAATTGGTTAAAGAAAAACATGGATCCGA
TTTTCGGATGGGGCAACGAATGCCGATTCAGTTGGGGCACCGCAAAAGAG
TTGCTCGAGTTGAAGGGAAGGCCAAAGGTCGATTGGCCTGGAGAAGAAGA
AAATACGCAGCTCAGGGACTTCCTCTTATCTTCGACCAGTAACACTACAA
AAGCTCAGCATGAGTTGCTGGAATGGTACGGGGCAAGGTCCACAGAGGTC
CTCTCTTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0016070 | RNA metabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004523 | RNA-DNA hybrid ribonuclease activity |
| GO:0003676 | nucleic acid binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09263OWL |
| DBxref | InterPro:IPR012337 |
| DBxref | InterPro:IPR024567 |
| DBxref | InterPro:IPR004649 |
| DBxref | InterPro:IPR023160 |
| DBxref | InterPro:IPR036397 |
| DBxref | PFAM:PF01351 |
| Product | Ribonuclease HII family protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| NKJJ01000004.1 | supercontig | NKJJ01000004.1:2398491..2399549 + |
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